FFCP PHASE1:Hg19::chr13:45775082..45775105,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=386618 | |EntrezGene=386618 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23227 | |HGNC=23227 | ||
|TSSclassifier=strong | |||
|UniProt=Q8WVF5 | |UniProt=Q8WVF5 | ||
|association_with_transcript=69bp_to_ENST00000405872,NM_198404,uc001uzx.3_5end | |association_with_transcript=69bp_to_ENST00000405872,NM_198404,uc001uzx.3_5end | ||
|cluster_id=chr13:45775082..45775105,- | |||
|description=CAGE_peak_5_at_KCTD4_5end | |description=CAGE_peak_5_at_KCTD4_5end | ||
|id=chr13:45775082..45775105,- | |id=chr13:45775082..45775105,- | ||
|ontology_enrichment_celltype=CL:0000359!3.84e-18!32;CL:0002539!3.70e-17!10;CL:0000192!5.16e-14!42;CL:0000514!5.16e-14!42;CL:0000055!2.34e-12!180;CL:0000680!2.27e-11!57;CL:0000056!2.27e-11!57;CL:0000355!2.27e-11!57;CL:0002559!9.00e-10!4;CL:0000187!9.82e-10!54;CL:0002620!1.24e-09!23;CL:0000220!1.13e-08!246;CL:0002321!1.66e-08!248;CL:0000183!1.73e-08!59;CL:0000393!2.89e-08!60;CL:0000211!2.89e-08!60;CL:0000346!8.02e-08!3;CL:1000428!8.02e-08!3;CL:0000222!1.91e-07!119;CL:0002166!3.25e-07!3;CL:0002621!6.72e-07!3 | |ontology_enrichment_celltype=CL:0000359!3.84e-18!32;CL:0002539!3.70e-17!10;CL:0000192!5.16e-14!42;CL:0000514!5.16e-14!42;CL:0000055!2.34e-12!180;CL:0000680!2.27e-11!57;CL:0000056!2.27e-11!57;CL:0000355!2.27e-11!57;CL:0002559!9.00e-10!4;CL:0000187!9.82e-10!54;CL:0002620!1.24e-09!23;CL:0000220!1.13e-08!246;CL:0002321!1.66e-08!248;CL:0000183!1.73e-08!59;CL:0000393!2.89e-08!60;CL:0000211!2.89e-08!60;CL:0000346!8.02e-08!3;CL:1000428!8.02e-08!3;CL:0000222!1.91e-07!119;CL:0002166!3.25e-07!3;CL:0002621!6.72e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000359;1.27e-20;32!CL:0002539;1.69e-19;10!CL:0002559;2.87e-17;5!CL:0000346;9.65e-17;3!CL:1000428;9.65e-17;3!CL:0002594;9.67e-13;4!CL:0000192;3.01e-12;43!CL:0002573;1.82e-08;2!CL:0002621;7.44e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,3.22e-22,32;CL:0002539,1.38e-19,10;CL:0002559,2.15e-17,5;CL:0000346,6.48e-17,3;CL:1000428,6.48e-17,3;CL:0000192,6.67e-16,43;CL:0000514,6.67e-16,43;CL:0000680,3.09e-13,58;CL:0000056,3.09e-13,58;CL:0000355,3.09e-13,58;CL:0002594,9.52e-13,4;CL:0000187,6.71e-12,55;CL:0002321,8.15e-11,250;CL:0000393,1.72e-10,61;CL:0000211,1.72e-10,61;CL:0000222,1.76e-10,121;CL:0002573,1.79e-08,2;CL:0002621,1.02e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000514;3.01e-12;43!CL:0000355;4.53e-07;58 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!7.95e-18!83;UBERON:0002329!7.95e-18!83;UBERON:0003077!7.95e-18!83;UBERON:0003059!7.95e-18!83;UBERON:0007282!7.95e-18!83;UBERON:0009618!7.95e-18!83;UBERON:0007285!7.95e-18!83;UBERON:0004237!3.70e-17!10;UBERON:0004695!3.70e-17!10;UBERON:0002111!3.70e-17!10;UBERON:0004178!3.70e-17!10;UBERON:0000486!1.23e-16!82;UBERON:0002097!2.13e-15!40;UBERON:0004290!3.41e-15!70;UBERON:0003102!4.79e-14!95;UBERON:0002199!4.48e-13!45;UBERON:0002416!4.48e-13!45;UBERON:0001637!7.59e-13!42;UBERON:0003509!7.59e-13!42;UBERON:0004572!7.59e-13!42;UBERON:0004573!9.33e-12!33;UBERON:0004571!9.33e-12!33;UBERON:0005256!7.59e-11!143;UBERON:0001135!9.96e-11!15;UBERON:0001134!2.99e-10!61;UBERON:0002036!2.99e-10!61;UBERON:0003082!2.99e-10!61;UBERON:0002073!9.00e-10!4;UBERON:0005086!9.00e-10!4;UBERON:0002385!9.55e-10!63;UBERON:0001015!9.55e-10!63;UBERON:0000383!9.55e-10!63;UBERON:0000947!7.66e-09!21;UBERON:0010191!7.66e-09!21;UBERON:0001981!1.98e-08!60;UBERON:0007500!1.98e-08!60;UBERON:0004537!1.98e-08!60;UBERON:0006965!1.98e-08!60;UBERON:0002067!5.24e-08!9;UBERON:0004016!5.24e-08!9;UBERON:0010083!5.24e-08!9;UBERON:0000412!8.02e-08!3;UBERON:0001992!8.02e-08!3;UBERON:0001949!6.72e-07!3;UBERON:0000475!8.72e-07!365 | |ontology_enrichment_uberon=UBERON:0000914!7.95e-18!83;UBERON:0002329!7.95e-18!83;UBERON:0003077!7.95e-18!83;UBERON:0003059!7.95e-18!83;UBERON:0007282!7.95e-18!83;UBERON:0009618!7.95e-18!83;UBERON:0007285!7.95e-18!83;UBERON:0004237!3.70e-17!10;UBERON:0004695!3.70e-17!10;UBERON:0002111!3.70e-17!10;UBERON:0004178!3.70e-17!10;UBERON:0000486!1.23e-16!82;UBERON:0002097!2.13e-15!40;UBERON:0004290!3.41e-15!70;UBERON:0003102!4.79e-14!95;UBERON:0002199!4.48e-13!45;UBERON:0002416!4.48e-13!45;UBERON:0001637!7.59e-13!42;UBERON:0003509!7.59e-13!42;UBERON:0004572!7.59e-13!42;UBERON:0004573!9.33e-12!33;UBERON:0004571!9.33e-12!33;UBERON:0005256!7.59e-11!143;UBERON:0001135!9.96e-11!15;UBERON:0001134!2.99e-10!61;UBERON:0002036!2.99e-10!61;UBERON:0003082!2.99e-10!61;UBERON:0002073!9.00e-10!4;UBERON:0005086!9.00e-10!4;UBERON:0002385!9.55e-10!63;UBERON:0001015!9.55e-10!63;UBERON:0000383!9.55e-10!63;UBERON:0000947!7.66e-09!21;UBERON:0010191!7.66e-09!21;UBERON:0001981!1.98e-08!60;UBERON:0007500!1.98e-08!60;UBERON:0004537!1.98e-08!60;UBERON:0006965!1.98e-08!60;UBERON:0002067!5.24e-08!9;UBERON:0004016!5.24e-08!9;UBERON:0010083!5.24e-08!9;UBERON:0000412!8.02e-08!3;UBERON:0001992!8.02e-08!3;UBERON:0001949!6.72e-07!3;UBERON:0000475!8.72e-07!365 | ||
|ontology_enrichment_uberon_v019=UBERON:0004237;1.69e-19;10!UBERON:0004695;1.69e-19;10!UBERON:0002111;1.69e-19;10!UBERON:0004178;1.69e-19;10!UBERON:0002073;2.87e-17;5!UBERON:0000412;9.65e-17;3!UBERON:0001992;9.65e-17;3!UBERON:0004573;6.34e-14;33!UBERON:0004571;6.34e-14;33!UBERON:0001135;8.44e-13;15!UBERON:0001310;9.67e-13;4!UBERON:0001637;3.09e-12;42!UBERON:0003509;3.09e-12;42!UBERON:0004572;3.09e-12;42!UBERON:0000947;6.02e-12;21!UBERON:0010191;6.02e-12;21!UBERON:0007500;3.18e-08;56!UBERON:0001981;3.18e-08;56!UBERON:0004537;3.18e-08;56!UBERON:0002385;6.10e-08;31!UBERON:0001015;6.10e-08;31!UBERON:0000383;6.10e-08;31!UBERON:0001949;7.44e-08;3!UBERON:0002097;3.08e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004237,1.38e-19,10;UBERON:0004695,1.38e-19,10;UBERON:0002111,1.38e-19,10;UBERON:0004178,1.38e-19,10;UBERON:0001637,2.98e-19,42;UBERON:0003509,2.98e-19,42;UBERON:0004572,2.98e-19,42;UBERON:0002073,2.15e-17,5;UBERON:0005086,2.15e-17,5;UBERON:0000486,3.97e-17,83;UBERON:0000412,6.48e-17,3;UBERON:0001992,6.48e-17,3;UBERON:0002329,3.66e-16,71;UBERON:0003059,3.66e-16,71;UBERON:0007282,3.66e-16,71;UBERON:0004290,3.66e-16,71;UBERON:0009618,3.66e-16,71;UBERON:0003077,6.86e-16,72;UBERON:0007285,6.86e-16,72;UBERON:0007524,1.27e-15,73;UBERON:0004573,8.39e-15,33;UBERON:0004571,8.39e-15,33;UBERON:0007503,2.13e-14,78;UBERON:0007500,6.42e-13,59;UBERON:0001981,6.42e-13,59;UBERON:0004537,6.42e-13,59;UBERON:0006965,6.42e-13,59;UBERON:0001135,7.40e-13,15;UBERON:0001310,9.52e-13,4;UBERON:0001134,3.30e-12,62;UBERON:0002036,3.30e-12,62;UBERON:0003082,3.30e-12,62;UBERON:0000947,4.93e-12,21;UBERON:0010191,4.93e-12,21;UBERON:0002385,9.65e-12,64;UBERON:0001015,9.65e-12,64;UBERON:0000383,9.65e-12,64;UBERON:0000055,7.47e-11,68;UBERON:0005256,2.22e-10,122;UBERON:0004872,8.06e-10,83;UBERON:0002049,4.02e-09,78;UBERON:0007798,4.02e-09,78;UBERON:0001949,1.02e-07,3;UBERON:0003104,5.12e-07,160;UBERON:0009142,5.12e-07,160;UBERON:0002097,5.35e-07,41;UBERON:0000490,6.67e-07,148 | |||
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|short_description=p5@KCTD4 | |short_description=p5@KCTD4 | ||
}} | }} |
Latest revision as of 11:50, 17 September 2015
Short description: | p5@KCTD4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_KCTD4_5end |
Coexpression cluster: | NA |
Association with transcript: | 69bp_to_ENST00000405872, NM_198404, uc001uzx.3_5end |
EntrezGene: | KCTD4 |
HGNC: | 23227 |
UniProt: | Q8WVF5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 3.22e-22 | 32 |
aortic smooth muscle cell | 1.38e-19 | 10 |
hair follicle cell | 2.15e-17 | 5 |
hair follicle dermal papilla cell | 6.48e-17 | 3 |
stem cell of epidermis | 6.48e-17 | 3 |
smooth muscle cell | 6.67e-16 | 43 |
smooth muscle myoblast | 6.67e-16 | 43 |
muscle precursor cell | 3.09e-13 | 58 |
myoblast | 3.09e-13 | 58 |
multi-potent skeletal muscle stem cell | 3.09e-13 | 58 |
smooth muscle cell of the umbilical artery | 9.52e-13 | 4 |
muscle cell | 6.71e-12 | 55 |
embryonic cell | 8.15e-11 | 250 |
electrically responsive cell | 1.72e-10 | 61 |
electrically active cell | 1.72e-10 | 61 |
mesodermal cell | 1.76e-10 | 121 |
Schwann cell | 1.79e-08 | 2 |
gingival epithelial cell | 1.02e-07 | 3 |