FFCP PHASE1:Hg19::chr1:185958925..185958928,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:185958925..185958928,+ | |||
|coexpression_cluster_id=C90 | |coexpression_cluster_id=C90 | ||
|description=CAGE_peak_at_chr1:185958925..185958928,+ | |description=CAGE_peak_at_chr1:185958925..185958928,+ | ||
|id=chr1:185958925..185958928,+ | |id=chr1:185958925..185958928,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000333;3.42e-11;5 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005425;5.12e-50;1!UBERON:0003056;1.03e-17;3 | |||
|ontology_enrichment_disease=DOID:171!1.05e-11!10 | |ontology_enrichment_disease=DOID:171!1.05e-11!10 | ||
|ontology_enrichment_disease_v019=DOID:171;4.50e-45;10!DOID:3095;4.13e-21;22!DOID:2994;4.13e-21;22!DOID:169;1.50e-09;6 | |||
|ontology_enrichment_disease_v019_2=DOID:171,4.18e-45,10;DOID:3095,3.99e-21,22;DOID:2994,3.99e-21,22;DOID:169,1.44e-09,6 | |||
|ontology_enrichment_uberon=UBERON:0003714!7.88e-08!2 | |ontology_enrichment_uberon=UBERON:0003714!7.88e-08!2 | ||
|ontology_enrichment_uberon_v019=UBERON:0002346;3.11e-50;4!UBERON:0000923;3.11e-50;4!UBERON:0010316;3.11e-50;4!UBERON:0005291;3.11e-50;4!UBERON:0000941;5.12e-50;1!UBERON:0001785;5.12e-50;1!UBERON:0002464;5.12e-50;1!UBERON:0004904;5.12e-50;1!UBERON:0001021;5.12e-50;1!UBERON:0002050;1.81e-40;5!UBERON:0005423;1.81e-40;5!UBERON:0003714;8.10e-26;2!UBERON:0005162;8.10e-26;2!UBERON:0000122;8.10e-26;2!UBERON:0000010;7.17e-23;8!UBERON:0000013;3.42e-11;5!UBERON:0002410;3.42e-11;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,6.58e-50,1;UBERON:0001785,6.58e-50,1;UBERON:0002464,6.58e-50,1;UBERON:0004904,6.58e-50,1;UBERON:0001021,6.58e-50,1;UBERON:0003902,6.58e-50,1;UBERON:0005425,6.58e-50,1;UBERON:0003714,9.18e-26,2;UBERON:0005162,9.18e-26,2;UBERON:0000122,9.18e-26,2;UBERON:0000010,7.17e-23,8;UBERON:0001781,1.29e-13,4;UBERON:0000013,3.26e-11,5;UBERON:0002410,3.26e-11,5;UBERON:0000966,1.57e-09,6;UBERON:0005388,1.57e-09,6;UBERON:0001802,1.57e-09,6 | |||
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| ||
|short_description=p@chr1:185958925..185958928,+ | |short_description=p@chr1:185958925..185958928,+ | ||
}} | }} |
Latest revision as of 01:28, 28 July 2015
Short description: | p@chr1:185958925..185958928, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:185958925..185958928, + |
Coexpression cluster: | C90_neuroectodermal_peripheral_neuroepithelioma_neuroblastoma_carcinoid_parietal_putamen |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 6.58e-50 | 1 |
cranial nerve | 6.58e-50 | 1 |
nerve trunk | 6.58e-50 | 1 |
nerve connecting eye with brain | 6.58e-50 | 1 |
nerve | 6.58e-50 | 1 |
retinal neural layer | 6.58e-50 | 1 |
presumptive neural retina | 6.58e-50 | 1 |
neural tissue | 9.18e-26 | 2 |
multi cell component structure | 9.18e-26 | 2 |
neuron projection bundle | 9.18e-26 | 2 |
peripheral nervous system | 7.17e-23 | 8 |
layer of retina | 1.29e-13 | 4 |
sympathetic nervous system | 3.26e-11 | 5 |
autonomic nervous system | 3.26e-11 | 5 |
retina | 1.57e-09 | 6 |
photoreceptor array | 1.57e-09 | 6 |
posterior segment of eyeball | 1.57e-09 | 6 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 4.18e-45 | 10 |
germ cell and embryonal cancer | 3.99e-21 | 22 |
germ cell cancer | 3.99e-21 | 22 |
neuroendocrine tumor | 1.44e-09 | 6 |