FFCP PHASE1:Hg19::chr16:29129822..29129845,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
|||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:29129822..29129845,- | |||
|coexpression_cluster_id=C82 | |coexpression_cluster_id=C82 | ||
|description=CAGE_peak_at_chr16:29129822..29129845,- | |description=CAGE_peak_at_chr16:29129822..29129845,- | ||
|id=chr16:29129822..29129845,- | |id=chr16:29129822..29129845,- | ||
|ontology_enrichment_celltype=CL:0002057!9.72e-103!42;CL:0000860!3.98e-95!45;CL:0000766!1.33e-69!76;CL:0002009!6.69e-68!65;CL:0002194!5.01e-67!63;CL:0000576!5.01e-67!63;CL:0000040!5.01e-67!63;CL:0000559!5.01e-67!63;CL:0000557!2.78e-64!71;CL:0000839!2.88e-62!70;CL:0000738!1.77e-55!140;CL:0002087!6.69e-48!119;CL:0000763!1.26e-47!112;CL:0000049!1.26e-47!112;CL:0002031!2.39e-45!124;CL:0000037!2.88e-44!172;CL:0000566!2.88e-44!172;CL:0000988!4.69e-41!182;CL:0002032!1.85e-39!165;CL:0000837!1.85e-39!165;CL:0002393!6.80e-26!9;CL:0002397!6.80e-26!9;CL:0000134!2.66e-16!358;CL:0002320!1.04e-15!365;CL:0000219!1.28e-13!390;CL:0000048!3.93e-11!430;CL:0000723!8.86e-11!436;CL:0000034!2.52e-10!444;CL:0000767!3.61e-10!3;CL:0000784!4.53e-09!3;CL:0000875!5.50e-09!3;CL:0002396!5.50e-09!3;CL:0000623!6.86e-09!3;CL:0000825!6.86e-09!3 | |ontology_enrichment_celltype=CL:0002057!9.72e-103!42;CL:0000860!3.98e-95!45;CL:0000766!1.33e-69!76;CL:0002009!6.69e-68!65;CL:0002194!5.01e-67!63;CL:0000576!5.01e-67!63;CL:0000040!5.01e-67!63;CL:0000559!5.01e-67!63;CL:0000557!2.78e-64!71;CL:0000839!2.88e-62!70;CL:0000738!1.77e-55!140;CL:0002087!6.69e-48!119;CL:0000763!1.26e-47!112;CL:0000049!1.26e-47!112;CL:0002031!2.39e-45!124;CL:0000037!2.88e-44!172;CL:0000566!2.88e-44!172;CL:0000988!4.69e-41!182;CL:0002032!1.85e-39!165;CL:0000837!1.85e-39!165;CL:0002393!6.80e-26!9;CL:0002397!6.80e-26!9;CL:0000134!2.66e-16!358;CL:0002320!1.04e-15!365;CL:0000219!1.28e-13!390;CL:0000048!3.93e-11!430;CL:0000723!8.86e-11!436;CL:0000034!2.52e-10!444;CL:0000767!3.61e-10!3;CL:0000784!4.53e-09!3;CL:0000875!5.50e-09!3;CL:0002396!5.50e-09!3;CL:0000623!6.86e-09!3;CL:0000825!6.86e-09!3 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.64e-86;33!CL:0002057;1.64e-86;33!CL:0000576;4.42e-67;48!CL:0000473;3.92e-61;39!CL:0000234;3.92e-61;39!CL:0000766;7.62e-41;69!CL:0002393;4.80e-31;6!CL:0002397;4.80e-31;6!CL:0000763;3.43e-17;100!CL:0000767;2.54e-16;3!CL:0000784;1.10e-14;3!CL:0002087;1.43e-14;104!CL:0000738;5.24e-12;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,4.96e-122,42;CL:0002057,4.96e-122,42;CL:0000473,6.10e-106,48;CL:0000234,6.10e-106,48;CL:0002194,9.98e-89,59;CL:0000576,9.98e-89,59;CL:0000040,9.98e-89,59;CL:0000559,9.98e-89,59;CL:0000766,2.15e-86,72;CL:0002009,1.21e-85,61;CL:0000839,9.62e-79,66;CL:0000557,1.75e-77,67;CL:0000763,1.62e-55,108;CL:0000049,1.62e-55,108;CL:0000738,1.26e-50,136;CL:0002087,2.59e-45,115;CL:0002031,3.77e-43,120;CL:0000037,1.17e-39,168;CL:0000988,2.79e-37,177;CL:0002032,3.64e-37,161;CL:0000837,3.64e-37,161;CL:0002393,2.32e-27,9;CL:0002397,2.32e-27,9;CL:0000767,2.30e-16,3;CL:0000134,5.92e-15,354;CL:0002320,1.62e-14,361;CL:0000784,1.78e-14,3;CL:0000219,5.62e-13,386;CL:0000048,4.34e-11,427;CL:0000723,7.90e-11,433;CL:0000034,1.72e-10,441 | |||
|ontology_enrichment_development_v019=CL:0002057;1.09e-86;42!CL:0000049;1.31e-17;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.00e-57!102;UBERON:0003061!1.00e-57!102;UBERON:0002371!8.23e-56!80;UBERON:0002193!1.12e-53!112;UBERON:0001474!3.86e-51!86;UBERON:0004765!7.14e-42!101;UBERON:0001434!7.14e-42!101;UBERON:0002405!4.23e-39!115;UBERON:0002204!4.80e-22!167;UBERON:0003081!1.44e-20!216;UBERON:0002384!6.71e-15!375;UBERON:0000926!6.84e-07!448;UBERON:0004120!6.84e-07!448;UBERON:0006603!6.84e-07!448 | |ontology_enrichment_uberon=UBERON:0002390!1.00e-57!102;UBERON:0003061!1.00e-57!102;UBERON:0002371!8.23e-56!80;UBERON:0002193!1.12e-53!112;UBERON:0001474!3.86e-51!86;UBERON:0004765!7.14e-42!101;UBERON:0001434!7.14e-42!101;UBERON:0002405!4.23e-39!115;UBERON:0002204!4.80e-22!167;UBERON:0003081!1.44e-20!216;UBERON:0002384!6.71e-15!375;UBERON:0000926!6.84e-07!448;UBERON:0004120!6.84e-07!448;UBERON:0006603!6.84e-07!448 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.26e-67,76;UBERON:0001474,3.07e-62,82;UBERON:0004765,3.68e-56,90;UBERON:0002390,2.53e-54,98;UBERON:0003061,2.53e-54,98;UBERON:0002405,3.79e-54,93;UBERON:0001434,6.48e-50,100;UBERON:0002193,1.07e-48,108;UBERON:0002204,3.21e-27,167;UBERON:0003081,1.04e-22,203;UBERON:0002384,6.39e-14,371;UBERON:0000926,4.23e-12,315;UBERON:0004120,4.23e-12,315;UBERON:0006603,4.23e-12,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.72037132218685,4.60595277716655,16.1008768248719,0,0,0,0,0,0,6.64794490238253,4.01088894940283,6.07630438004385,0,0,0,2.03557534291391,0.377875943688809,2.18325655069035,1.85943229524548,2.87817521615278,6.50383378879718,3.45230870786581,2.56160706529101,4.96612682766029,2.06847408441971,1.29096936716765,6.77132432971709,2.07066573496865,1.63743690034707,4.04502272001152,4.59125838556354,3.53021929783703,3.83602275479425,3.29851300186716,1.99463657621632,1.27867425159808,0.580418477257168,0,1.86846674698672,3.51748131359441,1.5644487552606,8.25317609879443,0,0.368277635987565,1.58231193720442,6.5489138756702,6.80333759888139,5.03180749220102,1.57260083605093,0.600707571366025,0.64290234678832,1.99508920618874,0.59675003159727,0.91332076882317,0,0,0,0.853460445133014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221533894583621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301150238155546,0.127986611154418,0,0.473554504088034,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,1.66943437013739,1.14398982156026,1.11437250398869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18218456121156,0.862510299438069,0.77005821767849,0,0,0,0,0,0.749007023947182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647142602455851,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0,0,0.238231775457789,0,1.29694662238543,0.540031437238115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1605880751037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213574825135389,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.406870733204662,0.363697318405119,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0.193373663920732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.72037132218685,4.60595277716655,16.1008768248719,0,0,0,0,0,0,6.64794490238253,4.01088894940283,6.07630438004385,0,0,0,2.03557534291391,0.377875943688809,2.18325655069035,1.85943229524548,2.87817521615278,6.50383378879718,3.45230870786581,2.56160706529101,4.96612682766029,2.06847408441971,1.29096936716765,6.77132432971709,2.07066573496865,1.63743690034707,4.04502272001152,4.59125838556354,3.53021929783703,3.83602275479425,3.29851300186716,1.99463657621632,1.27867425159808,0.580418477257168,0,1.86846674698672,3.51748131359441,1.5644487552606,8.25317609879443,0,0.368277635987565,1.58231193720442,6.5489138756702,6.80333759888139,5.03180749220102,1.57260083605093,0.600707571366025,0.64290234678832,1.99508920618874,0.59675003159727,0.91332076882317,0,0,0,0.853460445133014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221533894583621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301150238155546,0.127986611154418,0,0.473554504088034,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,1.66943437013739,1.14398982156026,1.11437250398869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18218456121156,0.862510299438069,0.77005821767849,0,0,0,0,0,0.749007023947182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647142602455851,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0,0,0.238231775457789,0,1.29694662238543,0.540031437238115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1605880751037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213574825135389,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.406870733204662,0.363697318405119,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0.193373663920732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr16:29129822..29129845,- | |short_description=p@chr16:29129822..29129845,- | ||
}} | }} |
Latest revision as of 07:49, 25 July 2015
Short description: | p@chr16:29129822..29129845, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:29129822..29129845, - |
Coexpression cluster: | C82_Basophils_CD14_Eosinophils_Natural_Peripheral_immature_CD34 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.26e-67 | 76 |
bone element | 3.07e-62 | 82 |
skeletal element | 3.68e-56 | 90 |
hematopoietic system | 2.53e-54 | 98 |
blood island | 2.53e-54 | 98 |
immune system | 3.79e-54 | 93 |
skeletal system | 6.48e-50 | 100 |
hemolymphoid system | 1.07e-48 | 108 |
musculoskeletal system | 3.21e-27 | 167 |
lateral plate mesoderm | 1.04e-22 | 203 |
connective tissue | 6.39e-14 | 371 |
mesoderm | 4.23e-12 | 315 |
mesoderm-derived structure | 4.23e-12 | 315 |
presumptive mesoderm | 4.23e-12 | 315 |