FFCP PHASE1:Hg19::chr2:220119280..220119295,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7277 | |EntrezGene=7277 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12407 | |HGNC=12407 | ||
|TSSclassifier=strong | |||
|UniProt=A8MUB1 | |UniProt=A8MUB1 | ||
|association_with_transcript=34bp_to_ENST00000392088,uc010zkz.1_5end | |association_with_transcript=34bp_to_ENST00000392088,uc010zkz.1_5end | ||
|cluster_id=chr2:220119280..220119295,- | |||
|coexpression_cluster_id=C1 | |coexpression_cluster_id=C1 | ||
|description=CAGE_peak_10_at_TUBA4A_5end | |description=CAGE_peak_10_at_TUBA4A_5end | ||
|id=chr2:220119280..220119295,- | |id=chr2:220119280..220119295,- | ||
|ontology_enrichment_celltype=CL:0000094!4.13e-10!8;CL:0000738!2.59e-08!140;CL:0000081!6.26e-07!11 | |ontology_enrichment_celltype=CL:0000094!4.13e-10!8;CL:0000738!2.59e-08!140;CL:0000081!6.26e-07!11 | ||
|ontology_enrichment_celltype_v019=CL:0000094;9.04e-22;8!CL:0000081;8.49e-16;11!CL:0000771;1.47e-15;2!CL:0000767;4.30e-10;3!CL:0000623;4.30e-10;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000094,6.44e-22,8;CL:0000081,6.65e-16,11;CL:0000771,1.43e-15,2;CL:0000767,3.75e-10,3;CL:0000623,7.46e-10,3;CL:0000825,7.46e-10,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.58e-27!115;UBERON:0001049!8.31e-15!57;UBERON:0005068!8.31e-15!57;UBERON:0006241!8.31e-15!57;UBERON:0007135!8.31e-15!57;UBERON:0001950!6.67e-13!20;UBERON:0002616!7.44e-13!59;UBERON:0000955!1.39e-12!69;UBERON:0006238!1.39e-12!69;UBERON:0001017!8.06e-12!82;UBERON:0002020!8.74e-12!34;UBERON:0003528!8.74e-12!34;UBERON:0001893!1.11e-11!34;UBERON:0005743!1.39e-11!86;UBERON:0002619!2.08e-11!22;UBERON:0002780!2.68e-11!41;UBERON:0001890!2.68e-11!41;UBERON:0006240!2.68e-11!41;UBERON:0003080!6.85e-11!42;UBERON:0003075!9.66e-11!86;UBERON:0007284!9.66e-11!86;UBERON:0002791!1.22e-10!33;UBERON:0001869!3.86e-10!32;UBERON:0000033!5.88e-10!123;UBERON:0002346!7.36e-10!90;UBERON:0000178!1.15e-09!15;UBERON:0000179!1.15e-09!15;UBERON:0000463!1.15e-09!15;UBERON:0000956!1.29e-09!25;UBERON:0000203!1.29e-09!25;UBERON:0000073!1.30e-09!94;UBERON:0001016!1.30e-09!94;UBERON:0000153!5.40e-09!129;UBERON:0007811!5.40e-09!129;UBERON:0004121!3.78e-07!169;UBERON:0000200!5.35e-07!6;UBERON:0000924!9.87e-07!173;UBERON:0006601!9.87e-07!173 | |ontology_enrichment_uberon=UBERON:0007023!2.58e-27!115;UBERON:0001049!8.31e-15!57;UBERON:0005068!8.31e-15!57;UBERON:0006241!8.31e-15!57;UBERON:0007135!8.31e-15!57;UBERON:0001950!6.67e-13!20;UBERON:0002616!7.44e-13!59;UBERON:0000955!1.39e-12!69;UBERON:0006238!1.39e-12!69;UBERON:0001017!8.06e-12!82;UBERON:0002020!8.74e-12!34;UBERON:0003528!8.74e-12!34;UBERON:0001893!1.11e-11!34;UBERON:0005743!1.39e-11!86;UBERON:0002619!2.08e-11!22;UBERON:0002780!2.68e-11!41;UBERON:0001890!2.68e-11!41;UBERON:0006240!2.68e-11!41;UBERON:0003080!6.85e-11!42;UBERON:0003075!9.66e-11!86;UBERON:0007284!9.66e-11!86;UBERON:0002791!1.22e-10!33;UBERON:0001869!3.86e-10!32;UBERON:0000033!5.88e-10!123;UBERON:0002346!7.36e-10!90;UBERON:0000178!1.15e-09!15;UBERON:0000179!1.15e-09!15;UBERON:0000463!1.15e-09!15;UBERON:0000956!1.29e-09!25;UBERON:0000203!1.29e-09!25;UBERON:0000073!1.30e-09!94;UBERON:0001016!1.30e-09!94;UBERON:0000153!5.40e-09!129;UBERON:0007811!5.40e-09!129;UBERON:0004121!3.78e-07!169;UBERON:0000200!5.35e-07!6;UBERON:0000924!9.87e-07!173;UBERON:0006601!9.87e-07!173 | ||
|ontology_enrichment_uberon_v019=UBERON:0001950;1.05e-19;20!UBERON:0002619;6.71e-18;22!UBERON:0000956;1.04e-15;25!UBERON:0000203;1.04e-15;25!UBERON:0001869;5.79e-14;32!UBERON:0001893;2.99e-13;34!UBERON:0001872;6.48e-13;5!UBERON:0002021;6.48e-13;5!UBERON:0002780;1.43e-11;41!UBERON:0001890;1.43e-11;41!UBERON:0002791;1.96e-11;32!UBERON:0003528;3.92e-09;34!UBERON:0002020;3.92e-09;34!UBERON:0002581;3.44e-08;1!UBERON:0002902;3.44e-08;1!UBERON:0002022;3.44e-08;1!UBERON:0009899;3.44e-08;1!UBERON:0007190;3.44e-08;1!UBERON:0000178;1.14e-07;15!UBERON:0000179;1.14e-07;15!UBERON:0000463;1.14e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001950,1.05e-19,20;UBERON:0002619,6.75e-18,22;UBERON:0000956,1.04e-15,25;UBERON:0000203,1.04e-15,25;UBERON:0001869,2.28e-15,32;UBERON:0002780,1.64e-14,41;UBERON:0001890,1.64e-14,41;UBERON:0003080,1.64e-14,41;UBERON:0006240,1.64e-14,41;UBERON:0001893,2.07e-14,34;UBERON:0007023,3.20e-14,114;UBERON:0002021,4.22e-13,5;UBERON:0001872,4.98e-13,5;UBERON:0002791,3.82e-12,32;UBERON:0003528,2.18e-11,34;UBERON:0002020,2.18e-11,34;UBERON:0000073,6.39e-11,53;UBERON:0002616,6.39e-11,53;UBERON:0001049,2.93e-10,56;UBERON:0005068,2.93e-10,56;UBERON:0006241,2.93e-10,56;UBERON:0007135,2.93e-10,56;UBERON:0000955,7.40e-10,68;UBERON:0006238,7.40e-10,68;UBERON:0003056,2.67e-09,61;UBERON:0002581,1.88e-08,1;UBERON:0002902,2.69e-08,1;UBERON:0009899,2.69e-08,1;UBERON:0007190,3.10e-08,1;UBERON:0001017,5.12e-08,81;UBERON:0002022,5.43e-08,1;UBERON:0000178,1.05e-07,15;UBERON:0000179,1.05e-07,15;UBERON:0000463,1.05e-07,15;UBERON:0001016,4.74e-07,89 | |||
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| ||
|short_description=p10@TUBA4A | |short_description=p10@TUBA4A | ||
}} | }} |
Latest revision as of 20:04, 24 September 2015
Short description: | p10@TUBA4A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_TUBA4A_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 34bp_to_ENST00000392088, uc010zkz.1_5end |
EntrezGene: | TUBA4A |
HGNC: | 12407 |
UniProt: | A8MUB1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte | 6.44e-22 | 8 |
blood cell | 6.65e-16 | 11 |
eosinophil | 1.43e-15 | 2 |
basophil | 3.75e-10 | 3 |
natural killer cell | 7.46e-10 | 3 |
pro-NK cell | 7.46e-10 | 3 |
Ontology term | p-value | n |
---|---|---|
neocortex | 1.05e-19 | 20 |
regional part of cerebral cortex | 6.75e-18 | 22 |
cerebral cortex | 1.04e-15 | 25 |
pallium | 1.04e-15 | 25 |
cerebral hemisphere | 2.28e-15 | 32 |
regional part of forebrain | 1.64e-14 | 41 |
forebrain | 1.64e-14 | 41 |
anterior neural tube | 1.64e-14 | 41 |
future forebrain | 1.64e-14 | 41 |
telencephalon | 2.07e-14 | 34 |
adult organism | 3.20e-14 | 114 |
occipital lobe | 4.22e-13 | 5 |
parietal lobe | 4.98e-13 | 5 |
regional part of telencephalon | 3.82e-12 | 32 |
brain grey matter | 2.18e-11 | 34 |
gray matter | 2.18e-11 | 34 |
regional part of nervous system | 6.39e-11 | 53 |
regional part of brain | 6.39e-11 | 53 |
neural tube | 2.93e-10 | 56 |
neural rod | 2.93e-10 | 56 |
future spinal cord | 2.93e-10 | 56 |
neural keel | 2.93e-10 | 56 |
brain | 7.40e-10 | 68 |
future brain | 7.40e-10 | 68 |
pre-chordal neural plate | 2.67e-09 | 61 |
postcentral gyrus | 1.88e-08 | 1 |
occipital pole | 2.69e-08 | 1 |
pole of cerebral hemisphere | 2.69e-08 | 1 |
paracentral gyrus | 3.10e-08 | 1 |
central nervous system | 5.12e-08 | 81 |
insula | 5.43e-08 | 1 |
blood | 1.05e-07 | 15 |
haemolymphatic fluid | 1.05e-07 | 15 |
organism substance | 1.05e-07 | 15 |
nervous system | 4.74e-07 | 89 |