FFCP PHASE1:Hg19::chr13:47149560..47149583,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:47149560..47149583,+ | |||
|coexpression_cluster_id=C12 | |coexpression_cluster_id=C12 | ||
|description=CAGE_peak_at_chr13:47149560..47149583,+ | |description=CAGE_peak_at_chr13:47149560..47149583,+ | ||
|id=chr13:47149560..47149583,+ | |id=chr13:47149560..47149583,+ | ||
|ontology_enrichment_celltype=CL:0002274!4.44e-26!5;CL:0000457!4.44e-26!5;CL:0002191!4.44e-26!5;CL:0000097!4.44e-26!5;CL:0000831!4.44e-26!5;CL:0002028!4.44e-26!5;CL:0000148!1.32e-17!10;CL:0000541!1.32e-17!10;CL:0000163!2.28e-14!9;CL:0000147!2.14e-12!14;CL:0000766!1.18e-09!76;CL:0000839!3.93e-09!70;CL:0000557!5.73e-09!71;CL:0000710!1.75e-08!20;CL:0000235!2.94e-08!10;CL:0002567!8.80e-08!3;CL:0002031!1.46e-07!124;CL:0000738!3.02e-07!140 | |ontology_enrichment_celltype=CL:0002274!4.44e-26!5;CL:0000457!4.44e-26!5;CL:0002191!4.44e-26!5;CL:0000097!4.44e-26!5;CL:0000831!4.44e-26!5;CL:0002028!4.44e-26!5;CL:0000148!1.32e-17!10;CL:0000541!1.32e-17!10;CL:0000163!2.28e-14!9;CL:0000147!2.14e-12!14;CL:0000766!1.18e-09!76;CL:0000839!3.93e-09!70;CL:0000557!5.73e-09!71;CL:0000710!1.75e-08!20;CL:0000235!2.94e-08!10;CL:0002567!8.80e-08!3;CL:0002031!1.46e-07!124;CL:0000738!3.02e-07!140 | ||
|ontology_enrichment_celltype_v019=CL:0000097;2.30e-99;5!CL:0000163;1.97e-55;9!CL:0002567;4.35e-27;3!CL:0002566;4.67e-21;1!CL:0000148;2.33e-18;10!CL:0000235;5.17e-14;6!CL:0000147;2.56e-13;14!CL:0000151;6.14e-13;36!CL:0000710;1.62e-09;20!CL:0000766;4.42e-08;69!CL:0000075;3.37e-07;27 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,2.30e-99,5;CL:0002028,2.30e-99,5;CL:0000163,1.97e-55,9;CL:0002567,4.65e-27,3;CL:0002566,5.16e-21,1;CL:0000148,2.47e-18,10;CL:0000541,2.47e-18,10;CL:0000839,2.41e-14,66;CL:0000557,3.94e-14,67;CL:0000151,4.57e-14,36;CL:0000235,4.84e-14,6;CL:0000147,2.67e-13,14;CL:0000766,3.78e-13,72;CL:0000710,1.67e-09,20;CL:0000763,1.02e-08,108;CL:0000049,1.02e-08,108;CL:0002031,8.06e-08,120;CL:0000075,3.44e-07,27;CL:0000738,7.27e-07,136 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001474!3.34e-08!86;UBERON:0002371!1.12e-07!80;UBERON:0004765!1.17e-07!101;UBERON:0001434!1.17e-07!101 | |ontology_enrichment_uberon=UBERON:0001474!3.34e-08!86;UBERON:0002371!1.12e-07!80;UBERON:0004765!1.17e-07!101;UBERON:0001434!1.17e-07!101 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.87e-12,76;UBERON:0001474,1.55e-11,82;UBERON:0004765,1.69e-10,90;UBERON:0002405,3.72e-10,93;UBERON:0002390,1.25e-09,98;UBERON:0003061,1.25e-09,98;UBERON:0001434,1.97e-09,100;UBERON:0002193,1.02e-08,108 | |||
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|short_description=p@chr13:47149560..47149583,+ | |short_description=p@chr13:47149560..47149583,+ | ||
}} | }} |
Latest revision as of 16:25, 24 July 2015
Short description: | p@chr13:47149560..47149583, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:47149560..47149583, + |
Coexpression cluster: | C12_Mast_Basophils_immature_chorionic_mature_CD14_Eosinophils |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 2.30e-99 | 5 |
basophil mast progenitor cell | 2.30e-99 | 5 |
endocrine cell | 1.97e-55 | 9 |
light melanocyte | 4.65e-27 | 3 |
dark melanocyte | 5.16e-21 | 1 |
melanocyte | 2.47e-18 | 10 |
melanoblast | 2.47e-18 | 10 |
myeloid lineage restricted progenitor cell | 2.41e-14 | 66 |
granulocyte monocyte progenitor cell | 3.94e-14 | 67 |
secretory cell | 4.57e-14 | 36 |
macrophage | 4.84e-14 | 6 |
pigment cell | 2.67e-13 | 14 |
myeloid leukocyte | 3.78e-13 | 72 |
neurecto-epithelial cell | 1.67e-09 | 20 |
myeloid cell | 1.02e-08 | 108 |
common myeloid progenitor | 1.02e-08 | 108 |
hematopoietic lineage restricted progenitor cell | 8.06e-08 | 120 |
columnar/cuboidal epithelial cell | 3.44e-07 | 27 |
leukocyte | 7.27e-07 | 136 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.87e-12 | 76 |
bone element | 1.55e-11 | 82 |
skeletal element | 1.69e-10 | 90 |
immune system | 3.72e-10 | 93 |
hematopoietic system | 1.25e-09 | 98 |
blood island | 1.25e-09 | 98 |
skeletal system | 1.97e-09 | 100 |
hemolymphoid system | 1.02e-08 | 108 |