FFCP PHASE1:Hg19::chr20:1305835..1305872,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr20:1305835..1305872,- | |||
|coexpression_cluster_id=C616 | |coexpression_cluster_id=C616 | ||
|description=CAGE_peak_at_chr20:1305835..1305872,- | |description=CAGE_peak_at_chr20:1305835..1305872,- | ||
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|ontology_enrichment_celltype=CL:0002057!9.34e-33!42;CL:0000860!2.15e-29!45;CL:0000738!5.15e-25!140;CL:0000766!2.11e-24!76;CL:0000557!3.32e-20!71;CL:0002087!6.68e-20!119;CL:0000037!8.22e-20!172;CL:0000566!8.22e-20!172;CL:0002031!5.77e-19!124;CL:0002009!1.20e-18!65;CL:0002194!1.38e-18!63;CL:0000576!1.38e-18!63;CL:0000040!1.38e-18!63;CL:0000559!1.38e-18!63;CL:0000839!2.01e-18!70;CL:0000988!2.13e-18!182;CL:0002032!4.75e-17!165;CL:0000837!4.75e-17!165;CL:0000763!4.49e-15!112;CL:0000049!4.49e-15!112;CL:0002320!2.29e-10!365;CL:0000134!8.02e-10!358;CL:0000219!2.98e-07!390;CL:0000048!4.86e-07!430;CL:0000034!7.48e-07!444;CL:0000094!7.61e-07!8 | |ontology_enrichment_celltype=CL:0002057!9.34e-33!42;CL:0000860!2.15e-29!45;CL:0000738!5.15e-25!140;CL:0000766!2.11e-24!76;CL:0000557!3.32e-20!71;CL:0002087!6.68e-20!119;CL:0000037!8.22e-20!172;CL:0000566!8.22e-20!172;CL:0002031!5.77e-19!124;CL:0002009!1.20e-18!65;CL:0002194!1.38e-18!63;CL:0000576!1.38e-18!63;CL:0000040!1.38e-18!63;CL:0000559!1.38e-18!63;CL:0000839!2.01e-18!70;CL:0000988!2.13e-18!182;CL:0002032!4.75e-17!165;CL:0000837!4.75e-17!165;CL:0000763!4.49e-15!112;CL:0000049!4.49e-15!112;CL:0002320!2.29e-10!365;CL:0000134!8.02e-10!358;CL:0000219!2.98e-07!390;CL:0000048!4.86e-07!430;CL:0000034!7.48e-07!444;CL:0000094!7.61e-07!8 | ||
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|ontology_enrichment_development_v019=CL:0002057;7.79e-48;42!CL:0000049;6.97e-10;108!CL:0000790;2.32e-08;18 | |ontology_enrichment_development_v019=CL:0002057;7.79e-48;42!CL:0000049;6.97e-10;108!CL:0000790;2.32e-08;18 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!3.11e-20!80;UBERON:0002193!1.08e-18!112;UBERON:0002390!1.77e-18!102;UBERON:0003061!1.77e-18!102;UBERON:0001474!2.30e-18!86;UBERON:0002405!7.89e-15!115;UBERON:0004765!3.61e-14!101;UBERON:0001434!3.61e-14!101;UBERON:0002384!3.28e-10!375;UBERON:0003081!3.31e-07!216 | |ontology_enrichment_uberon=UBERON:0002371!3.11e-20!80;UBERON:0002193!1.08e-18!112;UBERON:0002390!1.77e-18!102;UBERON:0003061!1.77e-18!102;UBERON:0001474!2.30e-18!86;UBERON:0002405!7.89e-15!115;UBERON:0004765!3.61e-14!101;UBERON:0001434!3.61e-14!101;UBERON:0002384!3.28e-10!375;UBERON:0003081!3.31e-07!216 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,8.45e-42,76;UBERON:0001474,5.35e-38,82;UBERON:0002405,2.62e-36,93;UBERON:0002390,7.33e-36,98;UBERON:0003061,7.33e-36,98;UBERON:0004765,1.03e-33,90;UBERON:0002193,2.64e-33,108;UBERON:0001434,2.53e-29,100;UBERON:0003081,3.82e-17,203;UBERON:0002384,5.59e-16,371;UBERON:0002204,1.45e-13,167;UBERON:0000926,1.36e-07,315;UBERON:0004120,1.36e-07,315;UBERON:0006603,1.36e-07,315 | |||
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| ||
|short_description=p@chr20:1305835..1305872,- | |short_description=p@chr20:1305835..1305872,- | ||
}} | }} |
Latest revision as of 11:57, 28 July 2015
Short description: | p@chr20:1305835..1305872, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:1305835..1305872, - |
Coexpression cluster: | C616_CD14_Natural_CD8_Basophils_Mast_Eosinophils_CD4 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 8.45e-42 | 76 |
bone element | 5.35e-38 | 82 |
immune system | 2.62e-36 | 93 |
hematopoietic system | 7.33e-36 | 98 |
blood island | 7.33e-36 | 98 |
skeletal element | 1.03e-33 | 90 |
hemolymphoid system | 2.64e-33 | 108 |
skeletal system | 2.53e-29 | 100 |
lateral plate mesoderm | 3.82e-17 | 203 |
connective tissue | 5.59e-16 | 371 |
musculoskeletal system | 1.45e-13 | 167 |
mesoderm | 1.36e-07 | 315 |
mesoderm-derived structure | 1.36e-07 | 315 |
presumptive mesoderm | 1.36e-07 | 315 |