FFCP PHASE1:Hg19::chr7:38315972..38316007,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=445347 | |EntrezGene=445347 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-53bp_to_uc003tgd.1_5end | |association_with_transcript=-53bp_to_uc003tgd.1_5end | ||
|cluster_id=chr7:38315972..38316007,- | |||
|description=CAGE_peak_5_at_TARP_5end | |description=CAGE_peak_5_at_TARP_5end | ||
|id=chr7:38315972..38316007,- | |id=chr7:38315972..38316007,- | ||
|ontology_enrichment_celltype=CL:0000763!4.20e-34!112;CL:0000049!4.20e-34!112;CL:0000037!2.14e-27!172;CL:0000566!2.14e-27!172;CL:0002057!7.20e-27!42;CL:0002032!1.41e-25!165;CL:0000837!1.41e-25!165;CL:0000988!5.30e-25!182;CL:0000860!1.47e-24!45;CL:0002194!7.00e-23!63;CL:0000576!7.00e-23!63;CL:0000040!7.00e-23!63;CL:0000559!7.00e-23!63;CL:0000557!1.56e-22!71;CL:0002009!6.51e-22!65;CL:0000766!7.68e-22!76;CL:0000839!3.16e-21!70;CL:0000738!2.07e-16!140;CL:0002087!1.28e-15!119;CL:0002031!1.27e-13!124;CL:0000623!1.88e-07!3;CL:0000825!1.88e-07!3 | |ontology_enrichment_celltype=CL:0000763!4.20e-34!112;CL:0000049!4.20e-34!112;CL:0000037!2.14e-27!172;CL:0000566!2.14e-27!172;CL:0002057!7.20e-27!42;CL:0002032!1.41e-25!165;CL:0000837!1.41e-25!165;CL:0000988!5.30e-25!182;CL:0000860!1.47e-24!45;CL:0002194!7.00e-23!63;CL:0000576!7.00e-23!63;CL:0000040!7.00e-23!63;CL:0000559!7.00e-23!63;CL:0000557!1.56e-22!71;CL:0002009!6.51e-22!65;CL:0000766!7.68e-22!76;CL:0000839!3.16e-21!70;CL:0000738!2.07e-16!140;CL:0002087!1.28e-15!119;CL:0002031!1.27e-13!124;CL:0000623!1.88e-07!3;CL:0000825!1.88e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.23e-45;33!CL:0002057;1.23e-45;33!CL:0000473;2.84e-31;39!CL:0000234;2.84e-31;39!CL:0000576;9.87e-25;48!CL:0000763;1.81e-16;100!CL:0000766;2.58e-14;69!CL:0002087;8.64e-09;104!CL:0000623;3.13e-08;3!CL:0002032;6.75e-07;1!CL:0000557;6.75e-07;1 | |ontology_enrichment_celltype_v019=CL:0000860;1.23e-45;33!CL:0002057;1.23e-45;33!CL:0000473;2.84e-31;39!CL:0000234;2.84e-31;39!CL:0000576;9.87e-25;48!CL:0000763;1.81e-16;100!CL:0000766;2.58e-14;69!CL:0002087;8.64e-09;104!CL:0000623;3.13e-08;3!CL:0002032;6.75e-07;1!CL:0000557;6.75e-07;1 | ||
|ontology_enrichment_celltype_v019_2=CL:0000763,6.73e-41,108;CL:0000049,6.73e-41,108;CL:0000860,2.21e-39,42;CL:0002057,2.21e-39,42;CL:0000473,5.70e-34,48;CL:0000234,5.70e-34,48;CL:0002194,6.16e-33,59;CL:0000576,6.16e-33,59;CL:0000040,6.16e-33,59;CL:0000559,6.16e-33,59;CL:0002032,8.41e-32,161;CL:0000837,8.41e-32,161;CL:0002009,9.82e-32,61;CL:0000557,1.01e-31,67;CL:0000037,3.13e-30,168;CL:0000839,4.83e-29,66;CL:0000988,2.17e-28,177;CL:0000766,2.68e-26,72;CL:0002087,1.95e-20,115;CL:0002031,2.17e-19,120;CL:0000738,2.86e-18,136;CL:0000134,4.28e-11,354;CL:0002320,9.33e-11,361;CL:0000219,1.46e-09,386;CL:0000034,2.03e-08,441;CL:0000623,3.50e-08,3;CL:0000825,3.50e-08,3;CL:0000048,4.25e-08,427;CL:0000723,6.77e-08,433 | |||
|ontology_enrichment_development_v019=CL:0002057;6.57e-27;42!CL:0000049;3.18e-13;108 | |ontology_enrichment_development_v019=CL:0002057;6.57e-27;42!CL:0000049;3.18e-13;108 | ||
|ontology_enrichment_disease=DOID:8692!4.44e-15!31;DOID:1240!1.15e-12!39;DOID:2531!1.32e-08!51;DOID:0060083!1.32e-08!51 | |ontology_enrichment_disease=DOID:8692!4.44e-15!31;DOID:1240!1.15e-12!39;DOID:2531!1.32e-08!51;DOID:0060083!1.32e-08!51 | ||
|ontology_enrichment_disease_v019=DOID:8692;5.14e-16;31!DOID:1240;1.29e-11;39!DOID:2531;5.83e-08;51!DOID:0060083;5.83e-08;51 | |ontology_enrichment_disease_v019=DOID:8692;5.14e-16;31!DOID:1240;1.29e-11;39!DOID:2531;5.83e-08;51!DOID:0060083;5.83e-08;51 | ||
|ontology_enrichment_disease_v019_2=DOID:8692,8.75e-17,31;DOID:1240,1.31e-15,39;DOID:2531,1.93e-11,51;DOID:0060083,1.93e-11,51 | |||
|ontology_enrichment_uberon=UBERON:0002390!2.02e-28!102;UBERON:0003061!2.02e-28!102;UBERON:0002193!9.19e-25!112;UBERON:0002371!2.20e-20!80;UBERON:0001474!2.61e-18!86;UBERON:0002405!2.47e-17!115;UBERON:0004765!2.86e-15!101;UBERON:0001434!2.86e-15!101;UBERON:0003081!1.84e-08!216 | |ontology_enrichment_uberon=UBERON:0002390!2.02e-28!102;UBERON:0003061!2.02e-28!102;UBERON:0002193!9.19e-25!112;UBERON:0002371!2.20e-20!80;UBERON:0001474!2.61e-18!86;UBERON:0002405!2.47e-17!115;UBERON:0004765!2.86e-15!101;UBERON:0001434!2.86e-15!101;UBERON:0003081!1.84e-08!216 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.75e-27,76;UBERON:0002390,2.91e-27,98;UBERON:0003061,2.91e-27,98;UBERON:0001474,3.61e-25,82;UBERON:0002193,2.70e-24,108;UBERON:0002405,5.75e-24,93;UBERON:0004765,1.48e-22,90;UBERON:0001434,7.11e-20,100;UBERON:0003081,1.27e-10,203;UBERON:0002384,2.71e-10,371;UBERON:0002204,3.68e-10,167 | |||
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| ||
|short_description=p5@TARP | |short_description=p5@TARP | ||
}} | }} |
Latest revision as of 12:14, 18 September 2015
Short description: | p5@TARP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_TARP_5end |
Coexpression cluster: | NA |
Association with transcript: | -53bp_to_uc003tgd.1_5end |
EntrezGene: | TARP |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 6.73e-41 | 108 |
common myeloid progenitor | 6.73e-41 | 108 |
classical monocyte | 2.21e-39 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.21e-39 | 42 |
defensive cell | 5.70e-34 | 48 |
phagocyte | 5.70e-34 | 48 |
monopoietic cell | 6.16e-33 | 59 |
monocyte | 6.16e-33 | 59 |
monoblast | 6.16e-33 | 59 |
promonocyte | 6.16e-33 | 59 |
hematopoietic oligopotent progenitor cell | 8.41e-32 | 161 |
hematopoietic multipotent progenitor cell | 8.41e-32 | 161 |
macrophage dendritic cell progenitor | 9.82e-32 | 61 |
granulocyte monocyte progenitor cell | 1.01e-31 | 67 |
hematopoietic stem cell | 3.13e-30 | 168 |
myeloid lineage restricted progenitor cell | 4.83e-29 | 66 |
hematopoietic cell | 2.17e-28 | 177 |
myeloid leukocyte | 2.68e-26 | 72 |
nongranular leukocyte | 1.95e-20 | 115 |
hematopoietic lineage restricted progenitor cell | 2.17e-19 | 120 |
leukocyte | 2.86e-18 | 136 |
mesenchymal cell | 4.28e-11 | 354 |
connective tissue cell | 9.33e-11 | 361 |
motile cell | 1.46e-09 | 386 |
stem cell | 2.03e-08 | 441 |
natural killer cell | 3.50e-08 | 3 |
pro-NK cell | 3.50e-08 | 3 |
multi fate stem cell | 4.25e-08 | 427 |
somatic stem cell | 6.77e-08 | 433 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.75e-27 | 76 |
hematopoietic system | 2.91e-27 | 98 |
blood island | 2.91e-27 | 98 |
bone element | 3.61e-25 | 82 |
hemolymphoid system | 2.70e-24 | 108 |
immune system | 5.75e-24 | 93 |
skeletal element | 1.48e-22 | 90 |
skeletal system | 7.11e-20 | 100 |
lateral plate mesoderm | 1.27e-10 | 203 |
connective tissue | 2.71e-10 | 371 |
musculoskeletal system | 3.68e-10 | 167 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 8.75e-17 | 31 |
leukemia | 1.31e-15 | 39 |
hematologic cancer | 1.93e-11 | 51 |
immune system cancer | 1.93e-11 | 51 |