FFCP PHASE1:Hg19::chr5:138719034..138719053,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9963 | |EntrezGene=9963 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10974 | |HGNC=10974 | ||
|TSSclassifier=strong | |||
|UniProt=C9IZC8,Q9UHI7 | |UniProt=C9IZC8,Q9UHI7 | ||
|association_with_transcript=0bp_to_ENST00000339881,ENST00000453898,NM_005847,NM_152685,uc003leg.2,uc003leh.2_5end | |association_with_transcript=0bp_to_ENST00000339881,ENST00000453898,NM_005847,NM_152685,uc003leg.2,uc003leh.2_5end | ||
|cluster_id=chr5:138719034..138719053,- | |||
|coexpression_cluster_id=C5 | |coexpression_cluster_id=C5 | ||
|description=CAGE_peak_3_at_SLC23A1_5end | |description=CAGE_peak_3_at_SLC23A1_5end | ||
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|ontology_enrichment_celltype=CL:0000181!1.05e-12!12;CL:0000417!1.05e-12!12;CL:0000668!1.05e-12!12;CL:0000414!1.05e-12!12;CL:0000412!1.05e-12!12;CL:0000182!1.05e-12!12;CL:0002150!7.52e-11!3;CL:0000861!7.52e-11!3;CL:0000159!6.08e-07!2 | |ontology_enrichment_celltype=CL:0000181!1.05e-12!12;CL:0000417!1.05e-12!12;CL:0000668!1.05e-12!12;CL:0000414!1.05e-12!12;CL:0000412!1.05e-12!12;CL:0000182!1.05e-12!12;CL:0002150!7.52e-11!3;CL:0000861!7.52e-11!3;CL:0000159!6.08e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0000182;6.07e-13;12 | |ontology_enrichment_celltype_v019=CL:0000182;6.07e-13;12 | ||
|ontology_enrichment_celltype_v019_2=CL:0000182,5.62e-13,12 | |||
|ontology_enrichment_development_v019=UBERON:0003104;1.40e-14;31!UBERON:0003099;7.83e-11;1!UBERON:0003852;7.83e-11;1!UBERON:0003918;3.00e-09;10!UBERON:0007687;3.00e-09;10!UBERON:0004161;1.98e-08;11!UBERON:0009497;3.32e-07;13 | |ontology_enrichment_development_v019=UBERON:0003104;1.40e-14;31!UBERON:0003099;7.83e-11;1!UBERON:0003852;7.83e-11;1!UBERON:0003918;3.00e-09;10!UBERON:0007687;3.00e-09;10!UBERON:0004161;1.98e-08;11!UBERON:0009497;3.32e-07;13 | ||
|ontology_enrichment_disease=DOID:305!5.79e-08!106;DOID:4468!1.09e-07!2;DOID:0050687!8.64e-07!143 | |ontology_enrichment_disease=DOID:305!5.79e-08!106;DOID:4468!1.09e-07!2;DOID:0050687!8.64e-07!143 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0002107;8.64e-18;19!UBERON:0006925;8.64e-18;19!UBERON:0002423;1.99e-13;25!UBERON:0005705;7.83e-11;1!UBERON:0008193;7.83e-11;1!UBERON:0010912;7.83e-11;1!UBERON:0002514;7.83e-11;1!UBERON:0003457;7.83e-11;1!UBERON:0008907;7.83e-11;1!UBERON:0008001;7.83e-11;1!UBERON:0007213;7.83e-11;1!UBERON:0009891;7.83e-11;1!UBERON:0007914;7.83e-11;1!UBERON:0007375;7.83e-11;1!UBERON:0003323;7.83e-11;1!UBERON:0010258;7.83e-11;1!UBERON:0005253;7.83e-11;1!UBERON:0007842;7.83e-11;1!UBERON:0002397;7.83e-11;1!UBERON:0003113;7.83e-11;1!UBERON:0003277;7.83e-11;1!UBERON:0001709;7.83e-11;1!UBERON:0002244;7.83e-11;1!UBERON:0005620;7.83e-11;1!UBERON:0010364;7.83e-11;1!UBERON:0004288;7.83e-11;1!UBERON:0002365;8.57e-11;31!UBERON:0002330;8.57e-11;31!UBERON:0005172;2.87e-10;52!UBERON:0005173;2.87e-10;52!UBERON:0002368;3.03e-09;33!UBERON:0000949;8.62e-09;43!UBERON:0002417;1.35e-07;58!UBERON:0000916;1.35e-07;58 | |ontology_enrichment_uberon_v019=UBERON:0002107;8.64e-18;19!UBERON:0006925;8.64e-18;19!UBERON:0002423;1.99e-13;25!UBERON:0005705;7.83e-11;1!UBERON:0008193;7.83e-11;1!UBERON:0010912;7.83e-11;1!UBERON:0002514;7.83e-11;1!UBERON:0003457;7.83e-11;1!UBERON:0008907;7.83e-11;1!UBERON:0008001;7.83e-11;1!UBERON:0007213;7.83e-11;1!UBERON:0009891;7.83e-11;1!UBERON:0007914;7.83e-11;1!UBERON:0007375;7.83e-11;1!UBERON:0003323;7.83e-11;1!UBERON:0010258;7.83e-11;1!UBERON:0005253;7.83e-11;1!UBERON:0007842;7.83e-11;1!UBERON:0002397;7.83e-11;1!UBERON:0003113;7.83e-11;1!UBERON:0003277;7.83e-11;1!UBERON:0001709;7.83e-11;1!UBERON:0002244;7.83e-11;1!UBERON:0005620;7.83e-11;1!UBERON:0010364;7.83e-11;1!UBERON:0004288;7.83e-11;1!UBERON:0002365;8.57e-11;31!UBERON:0002330;8.57e-11;31!UBERON:0005172;2.87e-10;52!UBERON:0005173;2.87e-10;52!UBERON:0002368;3.03e-09;33!UBERON:0000949;8.62e-09;43!UBERON:0002417;1.35e-07;58!UBERON:0000916;1.35e-07;58 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,7.91e-18,19;UBERON:0006925,7.91e-18,19;UBERON:0008836,7.91e-18,19;UBERON:0008835,2.41e-15,22;UBERON:0003894,2.41e-15,22;UBERON:0009854,1.16e-14,23;UBERON:0007499,1.87e-13,25;UBERON:0009497,1.87e-13,25;UBERON:0000015,1.87e-13,25;UBERON:0002423,1.87e-13,25;UBERON:0006235,1.87e-13,25;UBERON:0004161,1.87e-13,25;UBERON:0005172,3.60e-13,54;UBERON:0005173,3.60e-13,54;UBERON:0009856,6.37e-13,26;UBERON:0002417,9.92e-12,60;UBERON:0000916,9.92e-12,60;UBERON:0005705,9.05e-11,1;UBERON:0008193,9.05e-11,1;UBERON:0010912,9.05e-11,1;UBERON:0002514,9.05e-11,1;UBERON:0003457,9.05e-11,1;UBERON:0008907,9.05e-11,1;UBERON:0008001,9.05e-11,1;UBERON:0007213,9.05e-11,1;UBERON:0009891,9.05e-11,1;UBERON:0007914,9.05e-11,1;UBERON:0009292,9.05e-11,1;UBERON:0003099,9.05e-11,1;UBERON:0007375,9.05e-11,1;UBERON:0003323,9.05e-11,1;UBERON:0010258,9.05e-11,1;UBERON:0007842,9.05e-11,1;UBERON:0009494,9.05e-11,1;UBERON:0010042,9.05e-11,1;UBERON:0010045,9.05e-11,1;UBERON:0010259,9.05e-11,1;UBERON:0010359,9.05e-11,1;UBERON:0009526,9.05e-11,1;UBERON:0002397,9.05e-11,1;UBERON:0003113,9.05e-11,1;UBERON:0003277,9.05e-11,1;UBERON:0001709,9.05e-11,1;UBERON:0004066,9.05e-11,1;UBERON:0002244,9.05e-11,1;UBERON:0005620,9.05e-11,1;UBERON:0004362,9.05e-11,1;UBERON:0010364,9.05e-11,1;UBERON:0010046,9.05e-11,1;UBERON:0005868,9.05e-11,1;UBERON:0007238,9.05e-11,1;UBERON:0004288,9.05e-11,1;UBERON:0004068,9.05e-11,1;UBERON:0010334,9.05e-11,1;UBERON:0003852,9.05e-11,1;UBERON:0010253,9.05e-11,1;UBERON:0002365,9.06e-11,31;UBERON:0002330,9.06e-11,31;UBERON:0005177,8.57e-10,101;UBERON:0000949,1.01e-09,45;UBERON:0002368,1.73e-09,35;UBERON:0009569,4.09e-07,112 | |||
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|short_description=p3@SLC23A1 | |short_description=p3@SLC23A1 | ||
}} | }} |
Latest revision as of 00:10, 25 September 2015
Short description: | p3@SLC23A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SLC23A1_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 0bp_to_ENST00000339881, ENST00000453898, NM_005847, NM_152685, uc003leg.2, uc003leh.2_5end |
EntrezGene: | SLC23A1 |
HGNC: | 10974 |
UniProt: | C9IZC8Q9UHI7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 5.62e-13 | 12 |