FFCP PHASE1:Hg19::chr17:4269260..4269272,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:4269260..4269272,- | |||
|coexpression_cluster_id=C1 | |coexpression_cluster_id=C1 | ||
|description=CAGE_peak_at_chr17:4269260..4269272,- | |description=CAGE_peak_at_chr17:4269260..4269272,- | ||
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|ontology_enrichment_celltype=CL:0000133!3.73e-08!59;CL:0002322!1.32e-07!5;CL:0002319!9.02e-07!25 | |ontology_enrichment_celltype=CL:0000133!3.73e-08!59;CL:0002322!1.32e-07!5;CL:0002319!9.02e-07!25 | ||
|ontology_enrichment_celltype_v019=CL:0002032;9.48e-18;1!CL:0000511;9.48e-18;1!CL:0002625;9.48e-18;1!CL:0000228;9.48e-18;1!CL:0000557;9.48e-18;1!CL:0000216;9.48e-18;1!CL:0002372;9.48e-18;1!CL:0000307;8.86e-07;3 | |ontology_enrichment_celltype_v019=CL:0002032;9.48e-18;1!CL:0000511;9.48e-18;1!CL:0002625;9.48e-18;1!CL:0000228;9.48e-18;1!CL:0000557;9.48e-18;1!CL:0000216;9.48e-18;1!CL:0002372;9.48e-18;1!CL:0000307;8.86e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000511,5.26e-18,1;CL:0002625,5.26e-18,1;CL:0000216,5.26e-18,1;CL:0000228,6.23e-18,1;CL:0002372,6.23e-18,1 | |||
|ontology_enrichment_development_v019=UBERON:0005425;3.74e-18;1!UBERON:0009117;1.05e-07;10!UBERON:0005564;1.05e-07;10!UBERON:0003056;6.50e-07;3!CL:0000377;8.86e-07;3 | |ontology_enrichment_development_v019=UBERON:0005425;3.74e-18;1!UBERON:0009117;1.05e-07;10!UBERON:0005564;1.05e-07;10!UBERON:0003056;6.50e-07;3!CL:0000377;8.86e-07;3 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.98e-07!94;UBERON:0001016!1.98e-07!94 | |ontology_enrichment_uberon=UBERON:0000073!1.98e-07!94;UBERON:0001016!1.98e-07!94 | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;1.94e-19;8!UBERON:0000941;3.74e-18;1!UBERON:0001785;3.74e-18;1!UBERON:0002464;3.74e-18;1!UBERON:0004904;3.74e-18;1!UBERON:0001021;3.74e-18;1!UBERON:0001136;9.48e-18;1!UBERON:0001343;9.48e-18;1!UBERON:0004910;9.48e-18;1!UBERON:0004813;9.48e-18;1!UBERON:0003135;2.51e-14;11!UBERON:0003714;9.46e-10;2!UBERON:0005162;9.46e-10;2!UBERON:0000122;9.46e-10;2!UBERON:0004909;1.51e-09;2!UBERON:0000991;8.76e-08;21!UBERON:0003101;1.87e-07;22!UBERON:0000079;1.87e-07;22 | |ontology_enrichment_uberon_v019=UBERON:0000473;1.94e-19;8!UBERON:0000941;3.74e-18;1!UBERON:0001785;3.74e-18;1!UBERON:0002464;3.74e-18;1!UBERON:0004904;3.74e-18;1!UBERON:0001021;3.74e-18;1!UBERON:0001136;9.48e-18;1!UBERON:0001343;9.48e-18;1!UBERON:0004910;9.48e-18;1!UBERON:0004813;9.48e-18;1!UBERON:0003135;2.51e-14;11!UBERON:0003714;9.46e-10;2!UBERON:0005162;9.46e-10;2!UBERON:0000122;9.46e-10;2!UBERON:0004909;1.51e-09;2!UBERON:0000991;8.76e-08;21!UBERON:0003101;1.87e-07;22!UBERON:0000079;1.87e-07;22 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.56e-19,8;UBERON:0000941,3.16e-18,1;UBERON:0001785,3.16e-18,1;UBERON:0002464,3.16e-18,1;UBERON:0004904,3.16e-18,1;UBERON:0001021,3.16e-18,1;UBERON:0003902,3.16e-18,1;UBERON:0005425,3.16e-18,1;UBERON:0001136,5.26e-18,1;UBERON:0001343,5.26e-18,1;UBERON:0004910,5.26e-18,1;UBERON:0005154,5.26e-18,1;UBERON:0005295,5.26e-18,1;UBERON:0004813,5.26e-18,1;UBERON:0005297,5.26e-18,1;UBERON:0005294,5.26e-18,1;UBERON:0010141,5.26e-18,1;UBERON:0005891,5.26e-18,1;UBERON:0003135,2.15e-14,11;UBERON:0003714,8.69e-10,2;UBERON:0005162,8.69e-10,2;UBERON:0000122,8.69e-10,2;UBERON:0004909,1.12e-09,2;UBERON:0004871,3.55e-09,8;UBERON:0000991,8.08e-08,21;UBERON:0009196,8.08e-08,21;UBERON:0009117,8.08e-08,21;UBERON:0005564,8.08e-08,21;UBERON:0004176,1.73e-07,22;UBERON:0003101,1.73e-07,22;UBERON:0000079,1.73e-07,22;UBERON:0004876,5.98e-07,11 | |||
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| ||
|short_description=p@chr17:4269260..4269272,- | |short_description=p@chr17:4269260..4269272,- | ||
}} | }} |
Latest revision as of 17:27, 25 July 2015
Short description: | p@chr17:4269260..4269272, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:4269260..4269272, - |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
androgen binding protein secreting cell | 5.26e-18 | 1 |
seminiferous tubule epithelial cell | 5.26e-18 | 1 |
Sertoli cell | 5.26e-18 | 1 |
multinucleate cell | 6.23e-18 | 1 |
myotube | 6.23e-18 | 1 |
Ontology term | p-value | n |
---|---|---|
testis | 1.56e-19 | 8 |
cranial nerve II | 3.16e-18 | 1 |
cranial nerve | 3.16e-18 | 1 |
nerve trunk | 3.16e-18 | 1 |
nerve connecting eye with brain | 3.16e-18 | 1 |
nerve | 3.16e-18 | 1 |
retinal neural layer | 3.16e-18 | 1 |
presumptive neural retina | 3.16e-18 | 1 |
mesothelium | 5.26e-18 | 1 |
seminiferous tubule of testis | 5.26e-18 | 1 |
epithelium of male gonad | 5.26e-18 | 1 |
epithelial cord | 5.26e-18 | 1 |
sex cord | 5.26e-18 | 1 |
seminiferous tubule epithelium | 5.26e-18 | 1 |
testis sex cord | 5.26e-18 | 1 |
genital ridge | 5.26e-18 | 1 |
primitive sex cord of indifferent gonad | 5.26e-18 | 1 |
coelomic epithelium | 5.26e-18 | 1 |
male reproductive organ | 2.15e-14 | 11 |
neural tissue | 8.69e-10 | 2 |
multi cell component structure | 8.69e-10 | 2 |
neuron projection bundle | 8.69e-10 | 2 |
epithelium of gonad | 1.12e-09 | 2 |
somatic layer of lateral plate mesoderm | 3.55e-09 | 8 |
gonad | 8.08e-08 | 21 |
indifferent external genitalia | 8.08e-08 | 21 |
indifferent gonad | 8.08e-08 | 21 |
gonad primordium | 8.08e-08 | 21 |
external genitalia | 1.73e-07 | 22 |
male organism | 1.73e-07 | 22 |
male reproductive system | 1.73e-07 | 22 |
urogenital ridge | 5.98e-07 | 11 |