FFCP PHASE1:Hg19::chrX:73062912..73062975,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7503 | |EntrezGene=7503 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=12810 | |HGNC=12810 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=216bp_to_BX648323_5end | |association_with_transcript=216bp_to_BX648323_5end | ||
|cluster_id=chrX:73062912..73062975,- | |||
|coexpression_cluster_id=C639 | |coexpression_cluster_id=C639 | ||
|description=CAGE_peak_5_at_XIST_5end | |description=CAGE_peak_5_at_XIST_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!8.52e-14!57;UBERON:0005068!8.52e-14!57;UBERON:0006241!8.52e-14!57;UBERON:0007135!8.52e-14!57;UBERON:0002616!7.94e-12!59;UBERON:0002780!3.06e-11!41;UBERON:0001890!3.06e-11!41;UBERON:0006240!3.06e-11!41;UBERON:0003080!1.09e-10!42;UBERON:0002020!1.60e-10!34;UBERON:0003528!1.60e-10!34;UBERON:0007023!1.94e-10!115;UBERON:0003075!2.58e-10!86;UBERON:0007284!2.58e-10!86;UBERON:0001017!3.02e-10!82;UBERON:0005743!3.08e-10!86;UBERON:0002346!3.62e-10!90;UBERON:0001893!2.20e-09!34;UBERON:0002791!2.21e-09!33;UBERON:0003056!5.76e-09!61;UBERON:0000955!6.40e-09!69;UBERON:0006238!6.40e-09!69;UBERON:0000073!7.66e-09!94;UBERON:0001016!7.66e-09!94;UBERON:0001869!9.57e-09!32;UBERON:0000062!3.49e-07!511;UBERON:0000033!7.83e-07!123 | |ontology_enrichment_uberon=UBERON:0001049!8.52e-14!57;UBERON:0005068!8.52e-14!57;UBERON:0006241!8.52e-14!57;UBERON:0007135!8.52e-14!57;UBERON:0002616!7.94e-12!59;UBERON:0002780!3.06e-11!41;UBERON:0001890!3.06e-11!41;UBERON:0006240!3.06e-11!41;UBERON:0003080!1.09e-10!42;UBERON:0002020!1.60e-10!34;UBERON:0003528!1.60e-10!34;UBERON:0007023!1.94e-10!115;UBERON:0003075!2.58e-10!86;UBERON:0007284!2.58e-10!86;UBERON:0001017!3.02e-10!82;UBERON:0005743!3.08e-10!86;UBERON:0002346!3.62e-10!90;UBERON:0001893!2.20e-09!34;UBERON:0002791!2.21e-09!33;UBERON:0003056!5.76e-09!61;UBERON:0000955!6.40e-09!69;UBERON:0006238!6.40e-09!69;UBERON:0000073!7.66e-09!94;UBERON:0001016!7.66e-09!94;UBERON:0001869!9.57e-09!32;UBERON:0000062!3.49e-07!511;UBERON:0000033!7.83e-07!123 | ||
|ontology_enrichment_uberon_v019=UBERON:0003528;1.17e-07;34!UBERON:0002020;1.17e-07;34!UBERON:0000125;1.20e-07;9!UBERON:0002308;1.20e-07;9!UBERON:0002791;2.19e-07;32!UBERON:0002780;4.93e-07;41!UBERON:0001890;4.93e-07;41 | |ontology_enrichment_uberon_v019=UBERON:0003528;1.17e-07;34!UBERON:0002020;1.17e-07;34!UBERON:0000125;1.20e-07;9!UBERON:0002308;1.20e-07;9!UBERON:0002791;2.19e-07;32!UBERON:0002780;4.93e-07;41!UBERON:0001890;4.93e-07;41 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.56e-10,56;UBERON:0005068,1.56e-10,56;UBERON:0006241,1.56e-10,56;UBERON:0007135,1.56e-10,56;UBERON:0003528,2.91e-09,34;UBERON:0002020,2.91e-09,34;UBERON:0000073,3.11e-09,53;UBERON:0002616,3.11e-09,53;UBERON:0002780,7.24e-09,41;UBERON:0001890,7.24e-09,41;UBERON:0003080,7.24e-09,41;UBERON:0006240,7.24e-09,41;UBERON:0001017,5.44e-08,81;UBERON:0002791,5.69e-08,32;UBERON:0000125,8.28e-08,9;UBERON:0002308,8.28e-08,9;UBERON:0007023,1.80e-07,114;UBERON:0001016,3.04e-07,89;UBERON:0002346,3.14e-07,86;UBERON:0001893,3.61e-07,34;UBERON:0003075,3.96e-07,82;UBERON:0007284,3.96e-07,82;UBERON:0001869,7.21e-07,32;UBERON:0000955,7.37e-07,68;UBERON:0006238,7.37e-07,68 | |||
|phase1_expression=1.45342703416445,3.63970890614671,1.26858963686374,2.00146596706261,0,0.872338524100369,0,0,0.783556884599516,1.22866968250754,0,0,0,0,0,0,0,0,0,0.246242116153576,0.612002073732759,0,0.85870796139317,1.77936752594749,0,2.59805579543034,1.88831355734875,2.36132343941038,0.393364276848904,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,1.6194683300949,0,1.59938062657521,4.91238726795452,0,3.71886459049095,2.46700732813095,0,3.16461631554365,4.35473201099471,0,0.689491361473237,0.645484683583826,0,4.1413314699373,4.09359225086769,0,3.67300670845083,2.24650318953266,0,1.9791078011203,3.39088217956774,0,5.80418477257168,1.70215567407342,0.622822248995575,5.52747063564835,10.9511412868242,0,3.63239701580021,1.47311054395026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72425731986345,0,0,3.41527781465669,4.11066032559657,0,0,0.560508562981536,1.05353633910031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289803085735052,0,0,0,0,0,0,0,1.27426165729639,1.95325036156926,0,0,0,0,0.710331756132051,0.821127996921047,0,0,0,0,0,0,0,0,0,0,0,2.55244006342983,0,3.95256535619067,1.11332214173056,0,0,2.92092654289215,2.96020553408754,0,1.90792499444274,0,0.74291500265913,0,0,0,0,0.419499436209906,0,0,0,0,0,0.402829317109147,1.52054421143703,1.95249646038536,1.10298924103761,0,0,0,0,0,0,0.183201743930407,0,0,0,4.47274756525787,2.02608818663328,0,12.0471380714502,1.77334191099179,0,1.06748995729705,0.24666754841716,0,0,0,0,0,0.468642863667593,0,0,1.19558944441441,0.704606991862589,0,0,0,0,0,0,0,0,0,0,2.12701483782339,0,1.75591048352335,0,0,0,10.404598869954,1.49490172172997,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386521706326594,0.818238361772504,0,0,0,0,0,0,0,0,1.92972281457866,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.9430538304014,0,1.18157981336281,0,0,0.514703430895577,0,0,0.904760751704678,0.277765335475589,0.651616610620649,0,2.88662684050547,0.695582429850461,0,0,0,0,1.58040879591855,0,0,0.936017060556951,0,0,0.839910640994298,0,0.358234090811393,0.581267877027924,0.383382679165211,0.985326475791887,2.28925928434388,2.07328115540772,0.144119953416961,1.64115163454294,0,0,0,0,0,0,0,0.224262168690721,0,0.22001485746285,0.646358578788889,0,0,2.6593811658487,2.08014873822732,0,0,0,1.28680194292333,0,0,0,1.06617584622764,0,0.904318131178758,0,1.3996218765488,0,0,6.32501818449095,0,0,0,2.46128221334885,0,1.79060963239896,1.45710687191585,0,0,0,0.508189248444927,1.30139853857622,0,2.34522771468088,0,0,0,0.828831026872071,0,0.500170521059677,0,0,1.60586089917446,0,0,0,0,0,0,0,0,0,0.686286847621712,3.72182447021197,0,0,0,0,0.30239029332968,2.23297027036899,3.22270143904931,2.24528075546459,1.28139149255701,1.02341449813341,0,0,2.31314540703983,1.59805552781814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510281115829547,0,0,0,0.501689773854853,0.254876273045038,0,0.223874754722178,0,0,0.512900250232778,0,0.325378394664303,0.515205058238611,5.12789002982723,2.39277549769705,0,0,0,1.45006077438183,1.84858340537573,1.22802939780904,0,0,1.74020032697074,1.53407929348982,1.60257664164127,1.65284915360978,0,0,0,0,0,0,0,0,0,0,0,1.116475108079,2.21465597303108,0,0,2.99557291623744,0,0,0,4.94166653524899,2.23843564456804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6196469961995,0,0,0,0,1.06428319221179,0.211107635297664,0,0,0.349934720244983,0,0,0,0.564862804660675,0,0,1.33029046061003,0.918893600827838,2.02979043692868,1.52927441428475,3.98753031021914,0,0,2.59389324477087,1.62009431171434,2.37937552888281,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86220955581764,0,0,2.12923118845163,0,0,0,0,0,0,0,0,3.66379164797602,0,0,2.3441308683503,1.57768678274367,0.222886768554957,0,0,0,0,0.994147647766298,3.51673541026282,1.78093928036649,0,0,1.39473591775749,0,5.79445320064835,0,0,0.622079175323615,0,0,0,1.28236427328014,0,0,0,0.556608588971108,3.99227596002388,0,0.787139999965761,0,0,0,0,0,0,0,2.65722415744152,2.89431452700979,0,6.96649337566715,0.295547618953547,0,0,1.95193241990045,4.54006525172403,6.49469718327907,0,0,0,0.31900115973192,0.641183153813036,1.5991043280559,0,0.784901281975124,0,0.676786981851542,0.19606253431774,0.671286347903371,2.27704479269022,0,0,0,0,0,1.99052386215701,0.442287822516696,3.05515072466813,0,0,0,0.202203398942031,0,0,0,0,0,0,0,6.42752799424029,2.02197054811161,10.672962778429,15.3458523267926,0,0.992975867626496,1.2557316736289,0,0,3.60554149834161,0,0.587954384486266,0,0,0,0.290268993867255,0.146178634172371,0.246346371159628,0.775912131907355,2.91245218081951,2.48578814858586,0,0,0.50648636764703,8.99536360580094,0,0,0.19980960958213,5.18725501754782,0,0.171594997861965,0,0,0,0,0,0,0,1.80126086612937,3.14882371451584,0,0.429765441419957,0,0,0,0,4.3929380109778,2.57535628881943,0.223171457441873,0.53746777989381,2.88239906833923,0,0,0,0,0,0,0,3.40508515278939,0,2.47570985875021,0.83088067605837,1.5748172408605,4.6428117273477,0.303747783290123,3.01891218839339,1.41850273138557,0.681909645754975,0,0,0,0,0.662091970365432,1.77987976358325,1.08599920350743,0.864221491201268,0.653174720218818,0,0,14.3125938299754,0,0.58620893471233,0,2.71494208359256,4.23144325576608,0,0,0.85429930054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| ||
|short_description=p5@XIST | |short_description=p5@XIST | ||
}} | }} |
Latest revision as of 09:20, 16 September 2015
Short description: | p5@XIST |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_XIST_5end |
Coexpression cluster: | C639_parietal_embryonic_medial_temporal_cerebellum_skin_spinal |
Association with transcript: | 216bp_to_BX648323_5end |
EntrezGene: | XIST |
HGNC: | 12810 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural tube | 1.56e-10 | 56 |
neural rod | 1.56e-10 | 56 |
future spinal cord | 1.56e-10 | 56 |
neural keel | 1.56e-10 | 56 |
brain grey matter | 2.91e-09 | 34 |
gray matter | 2.91e-09 | 34 |
regional part of nervous system | 3.11e-09 | 53 |
regional part of brain | 3.11e-09 | 53 |
regional part of forebrain | 7.24e-09 | 41 |
forebrain | 7.24e-09 | 41 |
anterior neural tube | 7.24e-09 | 41 |
future forebrain | 7.24e-09 | 41 |
central nervous system | 5.44e-08 | 81 |
regional part of telencephalon | 5.69e-08 | 32 |
neural nucleus | 8.28e-08 | 9 |
nucleus of brain | 8.28e-08 | 9 |
adult organism | 1.80e-07 | 114 |
nervous system | 3.04e-07 | 89 |
neurectoderm | 3.14e-07 | 86 |
telencephalon | 3.61e-07 | 34 |
neural plate | 3.96e-07 | 82 |
presumptive neural plate | 3.96e-07 | 82 |
cerebral hemisphere | 7.21e-07 | 32 |
brain | 7.37e-07 | 68 |
future brain | 7.37e-07 | 68 |