FFCP PHASE1:Hg19::chr14:57197262..57197273,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt=G3V4C5 | |UniProt=G3V4C5 | ||
|association_with_transcript=-9bp_to_ENST00000556696_5end | |association_with_transcript=-9bp_to_ENST00000556696_5end | ||
|cluster_id=chr14:57197262..57197273,- | |||
|coexpression_cluster_id=C87 | |coexpression_cluster_id=C87 | ||
|description=CAGE_peak_1_at_ENST00000556696_5end | |description=CAGE_peak_1_at_ENST00000556696_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000082!7.18e-07!19 | |ontology_enrichment_celltype=CL:0000082!7.18e-07!19 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0003056;8.73e-45;3 | |ontology_enrichment_development_v019=UBERON:0003056;8.73e-45;3 | ||
|ontology_enrichment_disease=DOID:5409!7.46e-29!4;DOID:1325!5.57e-17!7;DOID:3904!5.57e-17!7;DOID:3905!1.91e-13!9;DOID:1324!1.85e-08!15;DOID:0050615!5.46e-08!16 | |ontology_enrichment_disease=DOID:5409!7.46e-29!4;DOID:1325!5.57e-17!7;DOID:3904!5.57e-17!7;DOID:3905!1.91e-13!9;DOID:1324!1.85e-08!15;DOID:0050615!5.46e-08!16 | ||
|ontology_enrichment_disease_v019=DOID:5409;1.50e-09;4 | |ontology_enrichment_disease_v019=DOID:5409;1.50e-09;4 | ||
|ontology_enrichment_disease_v019_2=DOID:5409,1.70e-09,4 | |||
|ontology_enrichment_uberon=UBERON:0001905!2.02e-57!2;UBERON:0002757!2.02e-57!2;UBERON:0010134!2.02e-57!2;UBERON:0002784!2.02e-57!2;UBERON:0005408!2.02e-57!2;UBERON:0001899!2.02e-57!2;UBERON:0003296!2.37e-29!4;UBERON:0010133!2.37e-29!4;UBERON:0000966!1.02e-23!5;UBERON:0005388!1.02e-23!5;UBERON:0001802!1.02e-23!5;UBERON:0001894!2.90e-17!7;UBERON:0006222!2.90e-17!7;UBERON:0000970!1.69e-13!20;UBERON:0002104!6.85e-13!21;UBERON:0000020!7.80e-12!23;UBERON:0001032!2.27e-11!24;UBERON:0004456!2.27e-11!24;UBERON:0003056!7.72e-08!61;UBERON:0000019!5.66e-07!19;UBERON:0000047!5.66e-07!19;UBERON:0004088!5.66e-07!19;UBERON:0003072!5.66e-07!19;UBERON:0003071!5.66e-07!19;UBERON:0004128!5.66e-07!19;UBERON:0004802!7.18e-07!19;UBERON:0000115!7.18e-07!19 | |ontology_enrichment_uberon=UBERON:0001905!2.02e-57!2;UBERON:0002757!2.02e-57!2;UBERON:0010134!2.02e-57!2;UBERON:0002784!2.02e-57!2;UBERON:0005408!2.02e-57!2;UBERON:0001899!2.02e-57!2;UBERON:0003296!2.37e-29!4;UBERON:0010133!2.37e-29!4;UBERON:0000966!1.02e-23!5;UBERON:0005388!1.02e-23!5;UBERON:0001802!1.02e-23!5;UBERON:0001894!2.90e-17!7;UBERON:0006222!2.90e-17!7;UBERON:0000970!1.69e-13!20;UBERON:0002104!6.85e-13!21;UBERON:0000020!7.80e-12!23;UBERON:0001032!2.27e-11!24;UBERON:0004456!2.27e-11!24;UBERON:0003056!7.72e-08!61;UBERON:0000019!5.66e-07!19;UBERON:0000047!5.66e-07!19;UBERON:0004088!5.66e-07!19;UBERON:0003072!5.66e-07!19;UBERON:0003071!5.66e-07!19;UBERON:0004128!5.66e-07!19;UBERON:0004802!7.18e-07!19;UBERON:0000115!7.18e-07!19 | ||
|ontology_enrichment_uberon_v019=UBERON:0001905;2.40e-66;2!UBERON:0002757;2.40e-66;2!UBERON:0010134;2.40e-66;2!UBERON:0005408;2.40e-66;2!UBERON:0001899;2.40e-66;2!UBERON:0003296;7.69e-34;4!UBERON:0010133;7.69e-34;4!UBERON:0002784;7.69e-34;4!UBERON:0000966;2.22e-27;5!UBERON:0005388;2.22e-27;5!UBERON:0001802;2.22e-27;5!UBERON:0001894;7.47e-20;7!UBERON:0000970;1.29e-15;20!UBERON:0002104;6.53e-15;21!UBERON:0000020;1.10e-13;23!UBERON:0001032;3.78e-13;24!UBERON:0004456;3.78e-13;24!UBERON:0000019;5.63e-08;19!UBERON:0000047;5.63e-08;19!UBERON:0004088;5.63e-08;19!UBERON:0010230;5.63e-08;19!UBERON:0001456;2.64e-07;21 | |ontology_enrichment_uberon_v019=UBERON:0001905;2.40e-66;2!UBERON:0002757;2.40e-66;2!UBERON:0010134;2.40e-66;2!UBERON:0005408;2.40e-66;2!UBERON:0001899;2.40e-66;2!UBERON:0003296;7.69e-34;4!UBERON:0010133;7.69e-34;4!UBERON:0002784;7.69e-34;4!UBERON:0000966;2.22e-27;5!UBERON:0005388;2.22e-27;5!UBERON:0001802;2.22e-27;5!UBERON:0001894;7.47e-20;7!UBERON:0000970;1.29e-15;20!UBERON:0002104;6.53e-15;21!UBERON:0000020;1.10e-13;23!UBERON:0001032;3.78e-13;24!UBERON:0004456;3.78e-13;24!UBERON:0000019;5.63e-08;19!UBERON:0000047;5.63e-08;19!UBERON:0004088;5.63e-08;19!UBERON:0010230;5.63e-08;19!UBERON:0001456;2.64e-07;21 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,1.45e-66,2;UBERON:0002757,1.45e-66,2;UBERON:0010134,1.45e-66,2;UBERON:0005408,1.45e-66,2;UBERON:0001899,1.45e-66,2;UBERON:0003296,5.98e-34,4;UBERON:0010133,5.98e-34,4;UBERON:0002784,5.98e-34,4;UBERON:0000966,4.86e-23,6;UBERON:0005388,4.86e-23,6;UBERON:0001802,4.86e-23,6;UBERON:0001894,6.48e-20,7;UBERON:0006222,6.48e-20,7;UBERON:0000970,6.53e-15,21;UBERON:0002104,6.53e-15,21;UBERON:0000020,3.78e-13,24;UBERON:0001032,3.78e-13,24;UBERON:0004456,3.78e-13,24;UBERON:0003056,3.98e-09,61;UBERON:0000019,1.25e-07,20;UBERON:0000047,1.25e-07,20;UBERON:0010312,1.25e-07,20;UBERON:0004088,1.25e-07,20;UBERON:0010230,1.25e-07,20;UBERON:0003072,1.25e-07,20;UBERON:0004128,1.25e-07,20;UBERON:0003071,1.25e-07,20;UBERON:0001456,5.09e-07,22;UBERON:0003075,6.13e-07,82;UBERON:0007284,6.13e-07,82 | |||
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|short_description=p1@ENST00000556696 | |short_description=p1@ENST00000556696 | ||
}} | }} |
Latest revision as of 17:30, 24 September 2015
Short description: | p1@ENST00000556696 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000556696_5end |
Coexpression cluster: | C87_retinoblastoma_left_nonsmall_heart_small_diaphragm_bronchogenic |
Association with transcript: | -9bp_to_ENST00000556696_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pineal body | 1.45e-66 | 2 |
regional part of epithalamus | 1.45e-66 | 2 |
secretory circumventricular organ | 1.45e-66 | 2 |
circumventricular organ | 1.45e-66 | 2 |
epithalamus | 1.45e-66 | 2 |
gland of diencephalon | 5.98e-34 | 4 |
neuroendocrine gland | 5.98e-34 | 4 |
regional part of diencephalon | 5.98e-34 | 4 |
retina | 4.86e-23 | 6 |
photoreceptor array | 4.86e-23 | 6 |
posterior segment of eyeball | 4.86e-23 | 6 |
diencephalon | 6.48e-20 | 7 |
future diencephalon | 6.48e-20 | 7 |
eye | 6.53e-15 | 21 |
visual system | 6.53e-15 | 21 |
sense organ | 3.78e-13 | 24 |
sensory system | 3.78e-13 | 24 |
entire sense organ system | 3.78e-13 | 24 |
pre-chordal neural plate | 3.98e-09 | 61 |
camera-type eye | 1.25e-07 | 20 |
simple eye | 1.25e-07 | 20 |
immature eye | 1.25e-07 | 20 |
ocular region | 1.25e-07 | 20 |
eyeball of camera-type eye | 1.25e-07 | 20 |
optic cup | 1.25e-07 | 20 |
optic vesicle | 1.25e-07 | 20 |
eye primordium | 1.25e-07 | 20 |
face | 5.09e-07 | 22 |
neural plate | 6.13e-07 | 82 |
presumptive neural plate | 6.13e-07 | 82 |
Ontology term | p-value | n |
---|---|---|
lung small cell carcinoma | 1.70e-09 | 4 |