FFCP PHASE1:Hg19::chr5:43043277..43043354,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=389289 | |EntrezGene=389289 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=33463 | |HGNC=33463 | ||
|TSSclassifier=strong | |||
|UniProt=Q3ZCQ2 | |UniProt=Q3ZCQ2 | ||
|association_with_transcript=-5bp_to_ENST00000314890,uc010ivj.1_5end | |association_with_transcript=-5bp_to_ENST00000314890,uc010ivj.1_5end | ||
|cluster_id=chr5:43043277..43043354,- | |||
|description=CAGE_peak_4_at_C5orf39_5end | |description=CAGE_peak_4_at_C5orf39_5end | ||
|id=chr5:43043277..43043354,- | |id=chr5:43043277..43043354,- | ||
|ontology_enrichment_celltype=CL:0000037!2.40e-26!172;CL:0000566!2.40e-26!172;CL:0000988!1.40e-24!182;CL:0002032!3.99e-24!165;CL:0000837!3.99e-24!165;CL:0000542!2.34e-17!53;CL:0000051!2.34e-17!53;CL:0000838!2.81e-17!52;CL:0002031!1.43e-16!124;CL:0002087!2.46e-16!119;CL:0000738!6.06e-16!140;CL:0000084!2.26e-12!25;CL:0000827!2.26e-12!25;CL:0000791!1.28e-11!18;CL:0000789!1.28e-11!18;CL:0002420!1.28e-11!18;CL:0002419!1.28e-11!18;CL:0000790!1.28e-11!18;CL:0000763!3.19e-09!112;CL:0000049!3.19e-09!112;CL:0000625!6.68e-08!11;CL:0000236!7.97e-08!14 | |ontology_enrichment_celltype=CL:0000037!2.40e-26!172;CL:0000566!2.40e-26!172;CL:0000988!1.40e-24!182;CL:0002032!3.99e-24!165;CL:0000837!3.99e-24!165;CL:0000542!2.34e-17!53;CL:0000051!2.34e-17!53;CL:0000838!2.81e-17!52;CL:0002031!1.43e-16!124;CL:0002087!2.46e-16!119;CL:0000738!6.06e-16!140;CL:0000084!2.26e-12!25;CL:0000827!2.26e-12!25;CL:0000791!1.28e-11!18;CL:0000789!1.28e-11!18;CL:0002420!1.28e-11!18;CL:0002419!1.28e-11!18;CL:0000790!1.28e-11!18;CL:0000763!3.19e-09!112;CL:0000049!3.19e-09!112;CL:0000625!6.68e-08!11;CL:0000236!7.97e-08!14 | ||
|ontology_enrichment_celltype_v019=CL:0000084;1.52e-18;25!CL:0000791;2.81e-18;18!CL:0000789;2.81e-18;18!CL:0002419;2.81e-18;18!CL:0000542;7.94e-13;53!CL:0000625;3.35e-12;11!CL:0000236;2.27e-09;13!CL:0000624;3.62e-07;6 | |ontology_enrichment_celltype_v019=CL:0000084;1.52e-18;25!CL:0000791;2.81e-18;18!CL:0000789;2.81e-18;18!CL:0002419;2.81e-18;18!CL:0000542;7.94e-13;53!CL:0000625;3.35e-12;11!CL:0000236;2.27e-09;13!CL:0000624;3.62e-07;6 | ||
|ontology_enrichment_celltype_v019_2=CL:0000037,3.50e-28,168;CL:0000988,4.32e-26,177;CL:0002032,6.24e-26,161;CL:0000837,6.24e-26,161;CL:0000838,3.78e-23,52;CL:0000542,1.92e-22,53;CL:0000051,1.92e-22,53;CL:0000084,6.72e-19,25;CL:0000827,6.72e-19,25;CL:0000791,6.94e-19,18;CL:0000789,6.94e-19,18;CL:0002420,6.94e-19,18;CL:0002419,6.94e-19,18;CL:0000790,6.94e-19,18;CL:0002031,7.11e-17,120;CL:0002087,4.07e-16,115;CL:0000738,4.77e-16,136;CL:0000625,1.73e-12,11;CL:0000236,2.92e-10,14;CL:0000763,4.85e-08,108;CL:0000049,4.85e-08,108;CL:0000624,1.86e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000790;2.81e-18;18!CL:0000051;7.94e-13;53 | |ontology_enrichment_development_v019=CL:0000790;2.81e-18;18!CL:0000051;7.94e-13;53 | ||
|ontology_enrichment_disease=DOID:1240!1.45e-12!39;DOID:8692!2.19e-10!31;DOID:2531!5.77e-10!51;DOID:0060083!5.77e-10!51 | |ontology_enrichment_disease=DOID:1240!1.45e-12!39;DOID:8692!2.19e-10!31;DOID:2531!5.77e-10!51;DOID:0060083!5.77e-10!51 | ||
|ontology_enrichment_disease_v019=DOID:8692;4.71e-11;31!DOID:1240;1.79e-10;39!DOID:2531;1.99e-07;51!DOID:0060083;1.99e-07;51 | |ontology_enrichment_disease_v019=DOID:8692;4.71e-11;31!DOID:1240;1.79e-10;39!DOID:2531;1.99e-07;51!DOID:0060083;1.99e-07;51 | ||
|ontology_enrichment_disease_v019_2=DOID:1240,1.93e-13,39;DOID:8692,1.63e-11,31;DOID:2531,5.43e-10,51;DOID:0060083,5.43e-10,51 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.65e-07!115;UBERON:0002384!7.78e-07!375 | |ontology_enrichment_uberon=UBERON:0007023!1.65e-07!115;UBERON:0002384!7.78e-07!375 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;4.42e-08;15!UBERON:0000179;4.42e-08;15!UBERON:0000463;4.42e-08;15 | |ontology_enrichment_uberon_v019=UBERON:0000178;4.42e-08;15!UBERON:0000179;4.42e-08;15!UBERON:0000463;4.42e-08;15 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,6.57e-08,15;UBERON:0000179,6.57e-08,15;UBERON:0000463,6.57e-08,15 | |||
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|phase1_expression=0.363356758541113,0.428201047781966,0.281908808191942,0,0.446961094427288,0,0,0,0.783556884599516,0,0,0,0,0.247532705920093,0.331397375727916,0,0,0,0,0.123121058076788,0.204000691244253,0.626909442956176,0,0,0,0.764134057479513,0.738905305049512,0.708397031823113,1.96682138424452,1.15148819429164,0.77408061658038,0,0,0.369754010166788,0,0.142169232487422,1.17440175733939,3.87796785972314,1.80490002723128,1.30206522429511,0.671746422719773,1.29557466407592,1.03030227053675,1.01778767145695,0,0.727752183563449,0.232429036905685,0.822335776043652,0.309706370895104,0.575384784644301,0.256160706529101,0.945928919554341,1.03423704220986,0,1.35426486594342,0.188242339542605,0,0,0.306083892370903,0.320929027076094,1.27867425159808,0.659702600373432,1.19678194572979,0.426224750532694,0.580418477257168,0.56738522469114,0.622822248995575,1.25624332628372,0.521482918420201,1.73751075764093,0.605399502633369,0,0.632924774881769,2.11255286311942,0,0.838634582033504,1.34794357375794,0.901061357049038,1.44653028027372,0.285012743741249,0.79566670879636,1.0959849225878,1.75996244461323,2.73069305631066,2.66852776159066,2.13365111283254,2.80277190925209,1.72425731986345,4.62731410949403,5.72432252721218,3.41527781465669,2.34894875748376,4.20500550937752,2.64342657158052,3.36305137788922,2.10707267820062,1.96709770113833,2.35806457649499,2.2616164889946,2.84217042164153,5.54067853277104,3.31413464014313,1.94826728407911,1.6711568532776,4.71369451959739,1.55073726208535,5.1452734115353,1.15282187753108,1.95089021339817,1.64437904603676,3.31620021343018,2.89803085735052,5.04174314751005,3.74557159325598,2.09071047609954,2.94604291013672,2.68254345521345,1.37450978193052,5.56643322442906,2.54852331459277,3.25541726928209,1.90090408889675,2.86092726247768,3.58362511232371,7.49584359314075,3.78843603270427,2.46338399076314,3.02410114837099,2.13952156626806,2.46201486600758,0,0,0,0.361439152384566,0,0.144846518960824,0,0.486634870302636,0.0945348171640679,0.665188192387692,0.263504357079378,0.523916301990851,0,0,0,0,0.132957960518865,0.476981248610684,0.571994910780128,0.74291500265913,0,0.860234595106124,0,0,0,0.275118041940067,0,0.258416759169329,0.71153252537342,0,0,0,0,0,0,0.17859945656816,0.22452937262617,0.225222960966644,0,0,0,0,0,0,0,0.25326102332916,0.264818361626438,1.14734648299525,0,0,0,0,0.933633106199299,0.269421344139376,0.490385709340376,0.302714855289863,0,0.234321431833797,0,0,0,0.587172493218824,0.161872944368132,0,0.204154171254893,0.122834317311768,0.619954687054593,0,0.247266929278557,0,0,0.673344455816265,0.250237039743928,0.831192346452549,0,0.30648779579902,0.45071417671979,0.226864366320042,0.358779271377724,0.640672166455702,0.635795703478686,0.900273288253207,0.412210116953756,1.28820270022815,0.18611685633159,1.0126579934476,0.876933046450788,1.26216887122057,0.368199594569197,0.969876340912871,0.710019185033229,0.10075209822764,0,0,0,0,0,0,0.116193942869518,0,0,0,1.56449532329816,0.643240938192885,0,0,1.44375896333917,1.77460200059766,2.02301628093722,0.964044119533928,0.992645754591546,1.96091499683166,1.18635309555548,0.674156540800822,0.98110732562673,1.53898862778556,0,0,0,0,0,0,0,1.7658523976586,0.491953754172454,0,0,0,0,0,0.977424915930974,0,0,0,0.234817388471643,0.288732895522148,0,0.380508304469197,0.790204397959275,0,0.492434012174795,0.234004265139238,0.743155811443641,0,0,0,0.0895585227028483,0.581267877027924,0,0.492663237895943,0.352193736052904,2.48793738648926,2.59415916150531,2.65109110195398,0,0,0,1.71072446022705,0,0.600686115687835,0,0.224262168690721,0,0.07333828582095,0,0,0.845302752556,0,0,0,0,0,0.142977993658148,1.08524321078289,0,0,0,0.791951872933429,0,0,0,1.2162378064119,0.502257091432126,0,0.239624855491583,0,0,0.144781306667579,0.205476322550383,0.179060963239896,1.45710687191585,3.34952292343276,2.15627574859517,1.54011643535698,0,0,0,0,0,0,2.99161459204025,0,0.12269149171914,1.00034104211935,0.271265023699736,0,0,0.157702415033935,0.234282829985426,0.601892199455438,0,0,0,0.737476674166813,0.60818530127658,0.587403472388222,0.343143423810856,2.48121631347465,2.15714200818617,1.38745825144478,0,0,0,0.744323423456331,0.767309866440312,0.280660094433074,0.256278298511402,0.511707249066704,0.321707842287215,1.48418066444991,0.308419387605311,0,0.246381468041427,0,0.813472649219715,1.0877350463246,0,0,0.114814448164607,0.364182336013434,0.262248829918848,0,0,0.784349769176855,0,0.211103257785751,0,0.170093705276516,0.863663664408557,0,0,0,0,0,0.447749509444357,22.3645074178853,18.300481571743,0,0,0,1.03041011647722,1.46511143709349,1.65018999841176,0,0,0,0.676695028044854,0.308097234229289,0.460511024178389,0,0.429680979473094,0.145016693914229,0.340906509664404,0.356128142586949,0,0,0.127612712494584,0.30347334256665,0.464845549297286,0.31481234683064,0,0.308033580176089,0.532306030317022,0,0.18532421910392,0,0.372158369359667,0,0.38126038784765,0.255897791311334,0.42793898803392,0.318203247925937,0,0.539617372749944,1.09814811894422,0.471249609382746,0,0,0,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| ||
|short_description=p4@C5orf39 | |short_description=p4@C5orf39 | ||
}} | }} |
Latest revision as of 00:08, 18 September 2015
Short description: | p4@C5orf39 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_C5orf39_5end |
Coexpression cluster: | NA |
Association with transcript: | -5bp_to_ENST00000314890, uc010ivj.1_5end |
EntrezGene: | C5orf39 |
HGNC: | 33463 |
UniProt: | Q3ZCQ2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 3.50e-28 | 168 |
hematopoietic cell | 4.32e-26 | 177 |
hematopoietic oligopotent progenitor cell | 6.24e-26 | 161 |
hematopoietic multipotent progenitor cell | 6.24e-26 | 161 |
lymphoid lineage restricted progenitor cell | 3.78e-23 | 52 |
lymphocyte | 1.92e-22 | 53 |
common lymphoid progenitor | 1.92e-22 | 53 |
T cell | 6.72e-19 | 25 |
pro-T cell | 6.72e-19 | 25 |
mature alpha-beta T cell | 6.94e-19 | 18 |
alpha-beta T cell | 6.94e-19 | 18 |
immature T cell | 6.94e-19 | 18 |
mature T cell | 6.94e-19 | 18 |
immature alpha-beta T cell | 6.94e-19 | 18 |
hematopoietic lineage restricted progenitor cell | 7.11e-17 | 120 |
nongranular leukocyte | 4.07e-16 | 115 |
leukocyte | 4.77e-16 | 136 |
CD8-positive, alpha-beta T cell | 1.73e-12 | 11 |
B cell | 2.92e-10 | 14 |
myeloid cell | 4.85e-08 | 108 |
common myeloid progenitor | 4.85e-08 | 108 |
CD4-positive, alpha-beta T cell | 1.86e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
blood | 6.57e-08 | 15 |
haemolymphatic fluid | 6.57e-08 | 15 |
organism substance | 6.57e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
leukemia | 1.93e-13 | 39 |
myeloid leukemia | 1.63e-11 | 31 |
hematologic cancer | 5.43e-10 | 51 |
immune system cancer | 5.43e-10 | 51 |