FFCP PHASE1:Hg19::chr1:40839478..40839487,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:40839478..40839487,+
|short_description=p4@SMAP2
|description=CAGE_peak_4_at_SMAP2_5end
|association_with_transcript=100bp_to_NM_022733_5end
|EntrezGene=6...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=64744 | |EntrezGene=64744 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25082 | |HGNC=25082 | ||
|TSSclassifier=strong | |||
|UniProt=Q8WU79 | |UniProt=Q8WU79 | ||
|association_with_transcript=100bp_to_NM_022733_5end | |||
|cluster_id=chr1:40839478..40839487,+ | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_4_at_SMAP2_5end | |||
|id=chr1:40839478..40839487,+ | |||
|ontology_enrichment_celltype=CL:0000738!7.43e-42!140;CL:0002087!2.63e-34!119;CL:0000037!4.53e-34!172;CL:0000566!4.53e-34!172;CL:0002032!1.15e-32!165;CL:0000837!1.15e-32!165;CL:0002031!1.16e-32!124;CL:0000988!1.26e-32!182;CL:0000766!1.29e-26!76;CL:0002057!2.55e-24!42;CL:0002009!7.03e-23!65;CL:0000557!1.75e-22!71;CL:0002194!9.34e-22!63;CL:0000576!9.34e-22!63;CL:0000040!9.34e-22!63;CL:0000559!9.34e-22!63;CL:0000860!2.31e-21!45;CL:0000763!6.75e-21!112;CL:0000049!6.75e-21!112;CL:0000839!4.13e-20!70;CL:0000838!2.43e-11!52;CL:0000542!7.58e-11!53;CL:0000051!7.58e-11!53;CL:0000094!3.40e-08!8;CL:0002393!4.00e-08!9;CL:0002397!4.00e-08!9;CL:0000134!2.55e-07!358;CL:0002320!3.31e-07!365;CL:0000945!9.75e-07!24;CL:0000826!9.75e-07!24 | |||
|ontology_enrichment_celltype_v019=CL:0000576;3.86e-27;48!CL:0000860;1.58e-26;33!CL:0002057;1.58e-26;33!CL:0000473;3.20e-21;39!CL:0000234;3.20e-21;39!CL:0000766;2.76e-19;69!CL:0002087;3.10e-16;104!CL:0000094;2.22e-14;8!CL:0000738;1.57e-13;136!CL:0000081;4.73e-12;11!CL:0000236;1.94e-10;13!CL:0000763;8.45e-10;100!CL:0002393;1.35e-09;6!CL:0002397;1.35e-09;6!CL:0000988;5.84e-09;177!CL:0000219;2.52e-07;193!CL:0000542;2.80e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,4.05e-59,136;CL:0002087,1.14e-48,115;CL:0000037,7.66e-46,168;CL:0002032,3.31e-44,161;CL:0000837,3.31e-44,161;CL:0000766,7.72e-44,72;CL:0000988,1.82e-43,177;CL:0002031,2.26e-42,120;CL:0000860,1.52e-41,42;CL:0002057,1.52e-41,42;CL:0000473,5.72e-39,48;CL:0000234,5.72e-39,48;CL:0002009,3.33e-37,61;CL:0002194,1.31e-36,59;CL:0000576,1.31e-36,59;CL:0000040,1.31e-36,59;CL:0000559,1.31e-36,59;CL:0000557,1.27e-34,67;CL:0000763,4.11e-32,108;CL:0000049,4.11e-32,108;CL:0000839,2.78e-31,66;CL:0000094,1.99e-14,8;CL:0002393,2.71e-14,9;CL:0002397,2.71e-14,9;CL:0000134,2.93e-12,354;CL:0000081,4.15e-12,11;CL:0002320,1.42e-11,361;CL:0000838,3.60e-11,52;CL:0000542,7.89e-11,53;CL:0000051,7.89e-11,53;CL:0000236,9.78e-10,14;CL:0000219,3.26e-09,386;CL:0000048,6.21e-08,427;CL:0000034,7.51e-08,441;CL:0000723,1.60e-07,433 | |||
|ontology_enrichment_development_v019=CL:0002057;4.69e-29;42!CL:0000049;3.58e-10;108!CL:0000051;2.80e-07;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.22e-32!102;UBERON:0003061!2.22e-32!102;UBERON:0002193!1.26e-29!112;UBERON:0002371!6.02e-21!80;UBERON:0001474!3.57e-19!86;UBERON:0002405!5.24e-17!115;UBERON:0007023!1.04e-16!115;UBERON:0004765!3.38e-15!101;UBERON:0001434!3.38e-15!101;UBERON:0002204!2.58e-11!167;UBERON:0000178!7.16e-11!15;UBERON:0000179!7.16e-11!15;UBERON:0000463!7.16e-11!15;UBERON:0003081!2.72e-10!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.15e-15;15!UBERON:0000179;1.15e-15;15!UBERON:0000463;1.15e-15;15!UBERON:0002390;9.32e-10;32!UBERON:0002193;2.11e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,4.54e-43,98;UBERON:0003061,4.54e-43,98;UBERON:0002193,6.33e-42,108;UBERON:0002371,2.15e-30,76;UBERON:0002405,7.95e-29,93;UBERON:0001474,4.09e-27,82;UBERON:0004765,1.94e-23,90;UBERON:0001434,1.03e-20,100;UBERON:0000178,8.12e-16,15;UBERON:0000179,8.12e-16,15;UBERON:0000463,8.12e-16,15;UBERON:0003081,2.03e-15,203;UBERON:0002384,4.25e-11,371;UBERON:0002204,5.62e-10,167 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.662794751455832,0.672325146451775,0.602694528023977,0,0,0.123121058076788,0,0,0.286235987131057,0.136874425072884,0,0.382067028739756,0.410502947249729,0.157421562627358,3.93364276848904,4.60595277716655,7.43117391917165,0,0,0,0.0774672005803016,0,0.293600439334847,2.21598163412751,3.60980005446255,1.95309783644267,5.59788685599811,7.12566065241755,8.75756929956234,2.18097358169347,1.51150377475524,1.21292030593908,1.39457422143411,0.822335776043652,1.54853185447552,4.60307827715441,5.37937483711111,1.89185783910868,2.75796544589295,1.93645405075148,1.35426486594342,1.31769637679823,0.272906150057846,0,3.06083892370903,2.24650318953266,2.55734850319616,3.95821560224059,4.18873681005427,4.26224750532694,1.45104619314292,1.13477044938228,1.24564449799115,4.52247597462138,5.21482918420201,2.6062661364614,0,3.31449872388808,0.949387162322653,4.85887158517466,8.71677629856678,2.93522103711726,2.69588714751588,3.60424542819615,3.2145117339416,5.98526761856622,6.16641699317179,3.28795476776341,1.75996244461323,4.91524750135918,1.77901850772711,1.70692089026603,2.00197993518006,1.72425731986345,3.30522436392431,0,8.53819453664173,8.80855784056408,6.88091810625412,2.64342657158052,2.24203425192614,0,0.786839080455332,1.96505381374582,1.02800749499755,0.668745981562712,1.95553359980154,1.89379122293893,1.94826728407911,0.891283655081389,2.65145316727353,1.77227115666897,0.812411591295047,0.25618263945135,0.910415432919148,0.164437904603676,0,0.289803085735052,1.4828656316206,3.47803076516627,0,0.339928028092699,0.766440987203842,2.40539211837841,1.01207876807801,0.318565414324097,0,0,1.05402583354441,0.639933055772092,0,0.236777252044017,1.64225599384209,2.62088766192152,2.40696176205157,1.59306844271079,0,0,0.12786256184353,0,0,0,0,0,0,0,0.087834785693126,0.327447688744282,0,0,1.29818957461873,0.696518949197069,0.132957960518865,0.715471872916026,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,38.2163210564583,27.1446184903828,0,0,0,0.264818361626438,0,0,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0.140450806702248,0,0,0.103325781175765,0,0,0,1.43723628363248,0,0,0.277064115484183,0.438977620880838,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0.355009592516614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77236972004421,0,0,0,0,0,0,0,0,1.03993478527958,0,0.115930404975077,0,0,0,0,0,0,0.984868024349589,0,0.148631162288728,0,0,0,0,0,0,0,0,0.414656231081544,0.144119953416961,0.25248486685276,0.063497894292169,0,0,0,0,0,0,0.224262168690721,0,0.07333828582095,0,0,1.690605505112,0,0,0,0,0.266422179016099,0,2.17048642156577,0.823240336780769,0.65147236858747,0.355391948742546,0,0,0,0,1.2162378064119,0,2.10833939483032,0,0,0,0,0,0.179060963239896,0.112085143993527,2.56139988262505,3.23441362289276,2.43851768931522,0,0,0,0,0,27.7132598860457,17.9496875522415,15.7477895105693,0,0,0.271265023699736,0,0.178428988797162,0,0,0.601892199455438,0,0,0,0,0.0868836144680828,0,0.343143423810856,3.92859249633486,3.45142721309787,3.30855429190677,0,0,0,0,0,0,0.128139149255701,0,0,0,0.462629081407967,0,0.492762936082855,0.519254429183621,0.581051892299796,0,0,0.0920809889358963,0.34444334449382,0.364182336013434,0.393373244878272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0.515205058238611,0,0,0,0,0,0.096670718292122,0.154048617114644,0,0.137836572484531,0.214840489736547,0.290033387828457,0,0.178064071293475,0,0,0,0.10115778085555,0.464845549297286,0,0,0,0,0,0,0.143124886741991,0,0.316379424718726,0,0,0.42793898803392,0,0,0,0,0,0.606547444719948,1.58510321173008,0.842516912477962,0,0.243713489631284,0,0.136499911407986,0.848432591722276,1.13008116620243,1.10273068709225,0,0.438450885253763,0,0.655894752046633,0.811641507850816,0.92947049429925,1.40847801266121,0,0.0982490410131212,0.7133421029625,0,0,0,0,0.699869440489966,0.0962221127255121,0,0,0.753150406214233,0,0,0,0,2.53723804616085,3.0585488285695,3.98753031021914,2.85878130549347,3.29089818468955,2.59389324477087,3.7802200606668,1.58625035258854,0,0,0,0,0,0,0,0,0.383010740264733,0,0,0,0,0,0,0.338583555603207,0,0,0,0.343505344755765,0,0.223676107892416,0.667396566847634,0,0,1.23087398947712,0.270455678475983,0,0,0,1.02555725490326,0,1.11443384277478,0,0,0,0,1.9882952955326,0.562677665642051,0,0,0,0.597743964753209,0.828851746593443,0,0,0.615424027305347,0,0,0,0,0.493217028184668,7.18449277040819,0,0,0.74214478529481,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0.241192877250816,0,0.331737779793674,0,1.97446857438575,0,0.139423744278603,0.230850775511391,0,0.23056390438806,0.0897576444097721,0,0.31900115973192,0.0915975934018623,0,0,0,0,0,0.588187602953219,0.167821586975843,0.569261198172555,0,0,0,0,0,0,0.796118080530053,0,1.48260564340311,0.741383633679017,0.522109747527277,1.07841812769083,0.802577647298789,0.937057782901357,0.182454789215666,0,0,0.394584402849391,0,0,1.83241080922615,0.450970258243478,0,0,0,0,0,0.284609546029793,0,0,0,0,0.52418000472609,0,0,0,0,0.0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| ||
|short_description=p4@SMAP2 | |||
}} | }} |
Latest revision as of 01:16, 18 September 2015
Short description: | p4@SMAP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SMAP2_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 100bp_to_NM_022733_5end |
EntrezGene: | SMAP2 |
HGNC: | 25082 |
UniProt: | Q8WU79 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 4.54e-43 | 98 |
blood island | 4.54e-43 | 98 |
hemolymphoid system | 6.33e-42 | 108 |
bone marrow | 2.15e-30 | 76 |
immune system | 7.95e-29 | 93 |
bone element | 4.09e-27 | 82 |
skeletal element | 1.94e-23 | 90 |
skeletal system | 1.03e-20 | 100 |
blood | 8.12e-16 | 15 |
haemolymphatic fluid | 8.12e-16 | 15 |
organism substance | 8.12e-16 | 15 |
lateral plate mesoderm | 2.03e-15 | 203 |
connective tissue | 4.25e-11 | 371 |
musculoskeletal system | 5.62e-10 | 167 |