FFCP PHASE1:Hg19::chr1:45956691..45956700,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:45956691..45956700,-
|short_description=p5@TESK2
|description=CAGE_peak_5_at_TESK2_5end
|association_with_transcript=114bp_to_ENST00000538496_5end
|Entrez...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10420 | |EntrezGene=10420 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11732 | |HGNC=11732 | ||
|TSSclassifier=strong | |||
|UniProt=F5GWP9 | |UniProt=F5GWP9 | ||
|association_with_transcript=114bp_to_ENST00000538496_5end | |||
|cluster_id=chr1:45956691..45956700,- | |||
|coexpression_cluster_id=C1647 | |||
|description=CAGE_peak_5_at_TESK2_5end | |||
|id=chr1:45956691..45956700,- | |||
|ontology_enrichment_celltype=CL:0002274!8.17e-14!5;CL:0000457!8.17e-14!5;CL:0002191!8.17e-14!5;CL:0000097!8.17e-14!5;CL:0000831!8.17e-14!5;CL:0002028!8.17e-14!5;CL:0000163!2.05e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000097;4.14e-109;5!CL:0000163;6.94e-61;9!CL:0000151;3.12e-14;36!CL:0002567;8.96e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,4.63e-109,5;CL:0002028,4.63e-109,5;CL:0000163,7.38e-61,9;CL:0000151,1.74e-15,36;CL:0002567,8.96e-09,3;CL:0000839,2.12e-08,66;CL:0000557,2.81e-08,67;CL:0000766,1.02e-07,72 | |||
|ontology_enrichment_development_v019=UBERON:0005425;1.87e-23;1!UBERON:0003056;1.00e-08;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.39e-08!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;1.87e-23;1!UBERON:0001785;1.87e-23;1!UBERON:0002464;1.87e-23;1!UBERON:0004904;1.87e-23;1!UBERON:0001021;1.87e-23;1!UBERON:0003714;1.96e-12;2!UBERON:0005162;1.96e-12;2!UBERON:0000122;1.96e-12;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,2.10e-23,1;UBERON:0001785,2.10e-23,1;UBERON:0002464,2.10e-23,1;UBERON:0004904,2.10e-23,1;UBERON:0001021,2.10e-23,1;UBERON:0003902,2.10e-23,1;UBERON:0005425,2.10e-23,1;UBERON:0003714,2.07e-12,2;UBERON:0005162,2.07e-12,2;UBERON:0000122,2.07e-12,2;UBERON:0002371,2.54e-07,76;UBERON:0001781,7.70e-07,4;UBERON:0001474,8.50e-07,82 | |||
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| ||
|short_description=p5@TESK2 | |||
}} | }} |
Latest revision as of 07:38, 18 September 2015
Short description: | p5@TESK2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_TESK2_5end |
Coexpression cluster: | C1647_Melanocyte_Mast_optic_Basophils_CD14_brain_MCF7 |
Association with transcript: | 114bp_to_ENST00000538496_5end |
EntrezGene: | TESK2 |
HGNC: | 11732 |
UniProt: | F5GWP9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 4.63e-109 | 5 |
basophil mast progenitor cell | 4.63e-109 | 5 |
endocrine cell | 7.38e-61 | 9 |
secretory cell | 1.74e-15 | 36 |
light melanocyte | 8.96e-09 | 3 |
myeloid lineage restricted progenitor cell | 2.12e-08 | 66 |
granulocyte monocyte progenitor cell | 2.81e-08 | 67 |
myeloid leukocyte | 1.02e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 2.10e-23 | 1 |
cranial nerve | 2.10e-23 | 1 |
nerve trunk | 2.10e-23 | 1 |
nerve connecting eye with brain | 2.10e-23 | 1 |
nerve | 2.10e-23 | 1 |
retinal neural layer | 2.10e-23 | 1 |
presumptive neural retina | 2.10e-23 | 1 |
neural tissue | 2.07e-12 | 2 |
multi cell component structure | 2.07e-12 | 2 |
neuron projection bundle | 2.07e-12 | 2 |
bone marrow | 2.54e-07 | 76 |
layer of retina | 7.70e-07 | 4 |
bone element | 8.50e-07 | 82 |