FFCP PHASE1:Hg19::chr1:53608289..53608315,-: Difference between revisions
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|id=chr1:53608289..53608315,-
|short_description=p1@SLC1A7
|description=CAGE_peak_1_at_SLC1A7_5end
|association_with_transcript=0bp_to_ENST00000371491,NM_006671,uc0...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6512 | |EntrezGene=6512 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10945 | |HGNC=10945 | ||
|TSSclassifier=strong | |||
|UniProt=Q9BW45,O00341 | |UniProt=Q9BW45,O00341 | ||
|association_with_transcript=0bp_to_ENST00000371491,NM_006671,uc001cuy.2,uc001cuz.3_5end | |||
|cluster_id=chr1:53608289..53608315,- | |||
|coexpression_cluster_id=C87 | |||
|description=CAGE_peak_1_at_SLC1A7_5end | |||
|id=chr1:53608289..53608315,- | |||
|ontology_enrichment_celltype=CL:0002586!1.83e-30!3;CL:0000149!4.99e-23!4;CL:0000147!5.68e-07!14 | |||
|ontology_enrichment_celltype_v019=CL:0002586;1.14e-24;3!CL:0000149;8.88e-19;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002586,1.29e-24,3;CL:0000149,9.72e-19,4 | |||
|ontology_enrichment_development_v019=UBERON:0003056;2.07e-25;3!UBERON:0006238;1.20e-07;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3093;4.43e-07;11 | |||
|ontology_enrichment_disease_v019_2=DOID:3093,4.43e-07,11 | |||
|ontology_enrichment_uberon=UBERON:0000966!2.45e-50!5;UBERON:0005388!2.45e-50!5;UBERON:0001802!2.45e-50!5;UBERON:0000970!3.02e-31!20;UBERON:0001781!1.83e-30!3;UBERON:0001782!1.83e-30!3;UBERON:0005424!1.83e-30!3;UBERON:0002104!1.02e-29!21;UBERON:0000020!4.61e-27!23;UBERON:0001032!6.71e-26!24;UBERON:0004456!6.71e-26!24;UBERON:0000019!3.16e-25!19;UBERON:0000047!3.16e-25!19;UBERON:0004088!3.16e-25!19;UBERON:0003072!3.16e-25!19;UBERON:0003071!3.16e-25!19;UBERON:0004128!3.16e-25!19;UBERON:0001456!9.09e-23!21;UBERON:0007625!1.67e-22!11;UBERON:0001905!2.55e-21!2;UBERON:0002757!2.55e-21!2;UBERON:0010134!2.55e-21!2;UBERON:0002784!2.55e-21!2;UBERON:0005408!2.55e-21!2;UBERON:0001899!2.55e-21!2;UBERON:0003056!7.12e-18!61;UBERON:0003075!2.37e-17!86;UBERON:0007284!2.37e-17!86;UBERON:0002346!1.68e-16!90;UBERON:0005085!2.58e-16!29;UBERON:0005743!1.50e-14!86;UBERON:0001894!1.60e-13!7;UBERON:0006222!1.60e-13!7;UBERON:0000033!1.66e-13!123;UBERON:0000073!4.98e-13!94;UBERON:0001016!4.98e-13!94;UBERON:0000153!8.68e-13!129;UBERON:0007811!8.68e-13!129;UBERON:0001301!2.96e-11!1;UBERON:0003296!3.83e-11!4;UBERON:0010133!3.83e-11!4;UBERON:0002581!6.00e-11!1;UBERON:0001444!1.38e-09!48;UBERON:0004121!3.27e-09!169;UBERON:0000924!5.96e-09!173;UBERON:0006601!5.96e-09!173;UBERON:0000063!6.75e-09!97;UBERON:0000955!4.57e-08!69;UBERON:0006238!4.57e-08!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0000966;8.66e-58;5!UBERON:0005388;8.66e-58;5!UBERON:0001802;8.66e-58;5!UBERON:0001905;1.18e-36;2!UBERON:0002757;1.18e-36;2!UBERON:0010134;1.18e-36;2!UBERON:0005408;1.18e-36;2!UBERON:0001899;1.18e-36;2!UBERON:0000970;2.97e-32;20!UBERON:0002104;1.01e-30;21!UBERON:0000020;4.70e-28;23!UBERON:0001032;6.91e-27;24!UBERON:0004456;6.91e-27;24!UBERON:0001781;1.14e-24;3!UBERON:0001782;1.14e-24;3!UBERON:0000019;9.04e-24;19!UBERON:0000047;9.04e-24;19!UBERON:0004088;9.04e-24;19!UBERON:0010230;9.04e-24;19!UBERON:0001456;1.58e-21;21!UBERON:0003296;6.77e-19;4!UBERON:0010133;6.77e-19;4!UBERON:0002784;6.77e-19;4!UBERON:0007625;3.18e-15;11!UBERON:0001894;3.14e-11;7!UBERON:0001444;6.50e-08;48!UBERON:0000033;8.62e-08;50 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000966,3.25e-48,6;UBERON:0005388,3.25e-48,6;UBERON:0001802,3.25e-48,6;UBERON:0001905,8.20e-37,2;UBERON:0002757,8.20e-37,2;UBERON:0010134,8.20e-37,2;UBERON:0005408,8.20e-37,2;UBERON:0001899,8.20e-37,2;UBERON:0000970,1.07e-30,21;UBERON:0002104,1.07e-30,21;UBERON:0000020,7.23e-27,24;UBERON:0001032,7.23e-27,24;UBERON:0004456,7.23e-27,24;UBERON:0001782,1.29e-24,3;UBERON:0005424,1.29e-24,3;UBERON:0000019,1.42e-22,20;UBERON:0000047,1.42e-22,20;UBERON:0010312,1.42e-22,20;UBERON:0004088,1.42e-22,20;UBERON:0010230,1.42e-22,20;UBERON:0003072,1.42e-22,20;UBERON:0004128,1.42e-22,20;UBERON:0003071,1.42e-22,20;UBERON:0001456,1.53e-20,22;UBERON:0003296,5.64e-19,4;UBERON:0010133,5.64e-19,4;UBERON:0002784,5.64e-19,4;UBERON:0001781,9.72e-19,4;UBERON:0007625,3.34e-15,11;UBERON:0005085,1.26e-14,31;UBERON:0003056,6.30e-14,61;UBERON:0001894,2.83e-11,7;UBERON:0006222,2.83e-11,7;UBERON:0003075,2.54e-10,82;UBERON:0007284,2.54e-10,82;UBERON:0002346,7.86e-10,86;UBERON:0001444,2.77e-09,49;UBERON:0000033,3.97e-08,56;UBERON:0010371,4.43e-08,104;UBERON:0000153,2.42e-07,62;UBERON:0007811,2.42e-07,62 | |||
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|short_description=p1@SLC1A7 | |||
}} | }} |
Latest revision as of 13:30, 18 September 2015
Short description: | p1@SLC1A7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SLC1A7_5end |
Coexpression cluster: | C87_retinoblastoma_left_nonsmall_heart_small_diaphragm_bronchogenic |
Association with transcript: | 0bp_to_ENST00000371491, NM_006671, uc001cuy.2, uc001cuz.3_5end |
EntrezGene: | SLC1A7 |
HGNC: | 10945 |
UniProt: | Q9BW45O00341 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
retinal pigment epithelial cell | 1.29e-24 | 3 |
visual pigment cell | 9.72e-19 | 4 |
Ontology term | p-value | n |
---|---|---|
nervous system cancer | 4.43e-07 | 11 |