FFCP PHASE1:Hg19::chr2:231808538..231808549,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:231808538..231808549,+ | |||
|coexpression_cluster_id=C730 | |coexpression_cluster_id=C730 | ||
|description=CAGE_peak_at_chr2:231808538..231808549,+ | |description=CAGE_peak_at_chr2:231808538..231808549,+ | ||
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|ontology_enrichment_celltype=CL:0000738!8.58e-32!140;CL:0000988!6.82e-30!182;CL:0002031!1.11e-29!124;CL:0002032!1.26e-27!165;CL:0000837!1.26e-27!165;CL:0000037!3.41e-26!172;CL:0000566!3.41e-26!172;CL:0000990!1.03e-24!8;CL:0002087!1.06e-24!119;CL:0000453!2.66e-24!5;CL:0000838!5.97e-21!52;CL:0000945!1.34e-20!24;CL:0000826!1.34e-20!24;CL:0000542!1.76e-20!53;CL:0000051!1.76e-20!53;CL:0000451!4.80e-20!10;CL:0000840!2.15e-12!5;CL:0001029!2.15e-12!5;CL:0001014!9.11e-11!2;CL:0001016!9.11e-11!2;CL:0000557!1.06e-10!71;CL:0002009!2.55e-10!65;CL:0000763!4.48e-10!112;CL:0000049!4.48e-10!112;CL:0000134!1.37e-08!358;CL:0002320!2.81e-08!365;CL:0000080!6.35e-08!6;CL:0000839!7.63e-08!70;CL:0002194!1.41e-07!63;CL:0000576!1.41e-07!63;CL:0000040!1.41e-07!63;CL:0000559!1.41e-07!63;CL:0002057!3.39e-07!42;CL:0000219!3.51e-07!390;CL:0000766!4.94e-07!76 | |ontology_enrichment_celltype=CL:0000738!8.58e-32!140;CL:0000988!6.82e-30!182;CL:0002031!1.11e-29!124;CL:0002032!1.26e-27!165;CL:0000837!1.26e-27!165;CL:0000037!3.41e-26!172;CL:0000566!3.41e-26!172;CL:0000990!1.03e-24!8;CL:0002087!1.06e-24!119;CL:0000453!2.66e-24!5;CL:0000838!5.97e-21!52;CL:0000945!1.34e-20!24;CL:0000826!1.34e-20!24;CL:0000542!1.76e-20!53;CL:0000051!1.76e-20!53;CL:0000451!4.80e-20!10;CL:0000840!2.15e-12!5;CL:0001029!2.15e-12!5;CL:0001014!9.11e-11!2;CL:0001016!9.11e-11!2;CL:0000557!1.06e-10!71;CL:0002009!2.55e-10!65;CL:0000763!4.48e-10!112;CL:0000049!4.48e-10!112;CL:0000134!1.37e-08!358;CL:0002320!2.81e-08!365;CL:0000080!6.35e-08!6;CL:0000839!7.63e-08!70;CL:0002194!1.41e-07!63;CL:0000576!1.41e-07!63;CL:0000040!1.41e-07!63;CL:0000559!1.41e-07!63;CL:0002057!3.39e-07!42;CL:0000219!3.51e-07!390;CL:0000766!4.94e-07!76 | ||
|ontology_enrichment_celltype_v019=CL:0000453;6.49e-76;5!CL:0000990;2.53e-42;8!CL:0000451;1.12e-34;10!CL:0001014;1.86e-31;2!CL:0001016;1.86e-31;2!CL:0000946;1.78e-16;1!CL:0002127;1.78e-16;1!CL:0000911;1.78e-16;1!CL:0000814;1.78e-16;1!CL:0000786;1.78e-16;1!CL:0000840;3.56e-11;5!CL:0000945;2.10e-10;24 | |ontology_enrichment_celltype_v019=CL:0000453;6.49e-76;5!CL:0000990;2.53e-42;8!CL:0000451;1.12e-34;10!CL:0001014;1.86e-31;2!CL:0001016;1.86e-31;2!CL:0000946;1.78e-16;1!CL:0002127;1.78e-16;1!CL:0000911;1.78e-16;1!CL:0000814;1.78e-16;1!CL:0000786;1.78e-16;1!CL:0000840;3.56e-11;5!CL:0000945;2.10e-10;24 | ||
|ontology_enrichment_celltype_v019_2=CL:0000453,2.20e-76,5;CL:0000990,1.39e-42,8;CL:0000451,6.89e-35,10;CL:0001014,1.17e-31,2;CL:0001016,1.17e-31,2;CL:0002127,1.93e-16,1;CL:0000914,1.93e-16,1;CL:0000911,1.93e-16,1;CL:0000814,1.93e-16,1;CL:0002042,1.93e-16,1;CL:0002039,1.93e-16,1;CL:0002040,1.93e-16,1;CL:0002041,1.93e-16,1;CL:0000946,2.25e-16,1;CL:0000786,2.25e-16,1;CL:0000980,2.25e-16,1;CL:0000988,2.02e-13,177;CL:0000840,3.06e-11,5;CL:0001029,3.06e-11,5;CL:0000945,2.50e-10,24;CL:0000826,2.50e-10,24;CL:0000738,3.57e-10,136;CL:0000893,6.94e-09,2;CL:0002489,6.94e-09,2;CL:0000809,6.94e-09,2;CL:0000808,6.94e-09,2;CL:0000894,6.94e-09,2;CL:0000806,6.94e-09,2;CL:0000807,6.94e-09,2;CL:0000805,6.94e-09,2;CL:0002425,6.94e-09,2;CL:0000785,7.49e-09,2;CL:0000955,7.49e-09,2;CL:0000818,7.49e-09,2;CL:0000954,7.49e-09,2;CL:0000816,7.49e-09,2;CL:0002032,1.90e-08,161;CL:0000837,1.90e-08,161;CL:0000037,4.71e-08,168;CL:0000838,3.02e-07,52;CL:0000542,4.15e-07,53;CL:0000051,4.15e-07,53 | |||
|ontology_enrichment_development_v019=CL:0000954;6.67e-09;2!CL:0002425;6.67e-09;2 | |ontology_enrichment_development_v019=CL:0000954;6.67e-09;2!CL:0002425;6.67e-09;2 | ||
|ontology_enrichment_disease=DOID:0060058!3.69e-15!10 | |ontology_enrichment_disease=DOID:0060058!3.69e-15!10 | ||
|ontology_enrichment_disease_v019=DOID:630;1.78e-16;1!DOID:0050177;1.78e-16;1!DOID:0050427;1.78e-16;1 | |ontology_enrichment_disease_v019=DOID:630;1.78e-16;1!DOID:0050177;1.78e-16;1!DOID:0050427;1.78e-16;1 | ||
|ontology_enrichment_disease_v019_2=DOID:630,1.65e-16,1;DOID:0050177,1.65e-16,1;DOID:0050427,1.65e-16,1 | |||
|ontology_enrichment_uberon=UBERON:0002390!1.59e-14!102;UBERON:0003061!1.59e-14!102;UBERON:0002193!2.96e-14!112;UBERON:0002405!1.47e-09!115;UBERON:0002371!3.73e-09!80;UBERON:0001474!2.64e-08!86;UBERON:0002384!7.48e-08!375 | |ontology_enrichment_uberon=UBERON:0002390!1.59e-14!102;UBERON:0003061!1.59e-14!102;UBERON:0002193!2.96e-14!112;UBERON:0002405!1.47e-09!115;UBERON:0002371!3.73e-09!80;UBERON:0001474!2.64e-08!86;UBERON:0002384!7.48e-08!375 | ||
|ontology_enrichment_uberon_v019=UBERON:0002331;1.25e-14;10!UBERON:0000178;5.92e-10;15!UBERON:0000179;5.92e-10;15!UBERON:0000463;5.92e-10;15 | |ontology_enrichment_uberon_v019=UBERON:0002331;1.25e-14;10!UBERON:0000178;5.92e-10;15!UBERON:0000179;5.92e-10;15!UBERON:0000463;5.92e-10;15 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002331,1.22e-14,10;UBERON:0000358,1.22e-14,10;UBERON:0000307,1.22e-14,10;UBERON:0000091,1.22e-14,10;UBERON:0000087,1.22e-14,10;UBERON:0007010,1.22e-14,10;UBERON:0007806,1.22e-14,10;UBERON:0008780,1.22e-14,10;UBERON:0005728,1.22e-14,10;UBERON:0000178,5.84e-10,15;UBERON:0000179,5.84e-10,15;UBERON:0000463,5.84e-10,15 | |||
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|short_description=p@chr2:231808538..231808549,+ | |short_description=p@chr2:231808538..231808549,+ | ||
}} | }} |
Latest revision as of 07:34, 29 July 2015
Short description: | p@chr2:231808538..231808549, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:231808538..231808549, + |
Coexpression cluster: | C730_migratory_cord_Mast_B_b_CD14_CD19 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
umbilical cord | 1.22e-14 | 10 |
blastocyst | 1.22e-14 | 10 |
blastula | 1.22e-14 | 10 |
bilaminar disc | 1.22e-14 | 10 |
inner cell mass | 1.22e-14 | 10 |
cleaving embryo | 1.22e-14 | 10 |
connecting stalk | 1.22e-14 | 10 |
inner cell mass derived epiblast | 1.22e-14 | 10 |
extraembryonic mesoderm | 1.22e-14 | 10 |
blood | 5.84e-10 | 15 |
haemolymphatic fluid | 5.84e-10 | 15 |
organism substance | 5.84e-10 | 15 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 1.65e-16 | 1 |
monogenic disease | 1.65e-16 | 1 |
xeroderma pigmentosum | 1.65e-16 | 1 |