FFCP PHASE1:Hg19::chr8:87755995..87756001,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54714 | |EntrezGene=54714 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2153 | |HGNC=2153 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NQW8 | |UniProt=Q9NQW8 | ||
|association_with_transcript=-92bp_to_ENST00000320005,NM_019098_5end | |association_with_transcript=-92bp_to_ENST00000320005,NM_019098_5end | ||
|cluster_id=chr8:87755995..87756001,- | |||
|coexpression_cluster_id=C73 | |coexpression_cluster_id=C73 | ||
|description=CAGE_peak_7_at_CNGB3_5end | |description=CAGE_peak_7_at_CNGB3_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0003056;4.09e-23;3 | |ontology_enrichment_development_v019=UBERON:0003056;4.09e-23;3 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001905!2.04e-45!2;UBERON:0002757!2.04e-45!2;UBERON:0010134!2.04e-45!2;UBERON:0002784!2.04e-45!2;UBERON:0005408!2.04e-45!2;UBERON:0001899!2.04e-45!2;UBERON:0003296!2.63e-23!4;UBERON:0010133!2.63e-23!4;UBERON:0001894!8.94e-14!7;UBERON:0006222!8.94e-14!7;UBERON:0001876!2.59e-12!2;UBERON:0002148!3.24e-12!2;UBERON:0009662!3.24e-12!2;UBERON:0005743!4.89e-09!86;UBERON:0000988!1.40e-08!3;UBERON:0006331!1.40e-08!3;UBERON:0000073!3.42e-08!94;UBERON:0001016!3.42e-08!94;UBERON:0000955!6.13e-08!69;UBERON:0006238!6.13e-08!69;UBERON:0007023!6.97e-07!115 | |ontology_enrichment_uberon=UBERON:0001905!2.04e-45!2;UBERON:0002757!2.04e-45!2;UBERON:0010134!2.04e-45!2;UBERON:0002784!2.04e-45!2;UBERON:0005408!2.04e-45!2;UBERON:0001899!2.04e-45!2;UBERON:0003296!2.63e-23!4;UBERON:0010133!2.63e-23!4;UBERON:0001894!8.94e-14!7;UBERON:0006222!8.94e-14!7;UBERON:0001876!2.59e-12!2;UBERON:0002148!3.24e-12!2;UBERON:0009662!3.24e-12!2;UBERON:0005743!4.89e-09!86;UBERON:0000988!1.40e-08!3;UBERON:0006331!1.40e-08!3;UBERON:0000073!3.42e-08!94;UBERON:0001016!3.42e-08!94;UBERON:0000955!6.13e-08!69;UBERON:0006238!6.13e-08!69;UBERON:0007023!6.97e-07!115 | ||
|ontology_enrichment_uberon_v019=UBERON:0001905;4.61e-131;2!UBERON:0002757;4.61e-131;2!UBERON:0010134;4.61e-131;2!UBERON:0005408;4.61e-131;2!UBERON:0001899;4.61e-131;2!UBERON:0003296;2.40e-66;4!UBERON:0010133;2.40e-66;4!UBERON:0002784;2.40e-66;4!UBERON:0001894;1.49e-38;7!UBERON:0000966;1.83e-14;5!UBERON:0005388;1.83e-14;5!UBERON:0001802;1.83e-14;5!UBERON:0002368;5.41e-08;33!UBERON:0000949;5.43e-08;43 | |ontology_enrichment_uberon_v019=UBERON:0001905;4.61e-131;2!UBERON:0002757;4.61e-131;2!UBERON:0010134;4.61e-131;2!UBERON:0005408;4.61e-131;2!UBERON:0001899;4.61e-131;2!UBERON:0003296;2.40e-66;4!UBERON:0010133;2.40e-66;4!UBERON:0002784;2.40e-66;4!UBERON:0001894;1.49e-38;7!UBERON:0000966;1.83e-14;5!UBERON:0005388;1.83e-14;5!UBERON:0001802;1.83e-14;5!UBERON:0002368;5.41e-08;33!UBERON:0000949;5.43e-08;43 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,4.61e-131,2;UBERON:0002757,4.61e-131,2;UBERON:0010134,4.61e-131,2;UBERON:0005408,4.61e-131,2;UBERON:0001899,4.61e-131,2;UBERON:0003296,2.40e-66,4;UBERON:0010133,2.40e-66,4;UBERON:0002784,2.40e-66,4;UBERON:0001894,1.49e-38,7;UBERON:0006222,1.49e-38,7;UBERON:0000966,2.74e-12,6;UBERON:0005388,2.74e-12,6;UBERON:0001802,2.74e-12,6;UBERON:0003056,1.22e-10,61;UBERON:0002368,1.09e-08,35;UBERON:0003075,3.31e-08,82;UBERON:0007284,3.31e-08,82;UBERON:0002346,7.10e-08,86;UBERON:0002780,2.04e-07,41;UBERON:0001890,2.04e-07,41;UBERON:0003080,2.04e-07,41;UBERON:0006240,2.04e-07,41;UBERON:0000949,5.42e-07,45 | |||
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|short_description=p7@CNGB3 | |short_description=p7@CNGB3 | ||
}} | }} |
Latest revision as of 08:47, 19 September 2015
Short description: | p7@CNGB3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_CNGB3_5end |
Coexpression cluster: | C73_pineal_eye_retina_caudate_cerebellum_left_parietal |
Association with transcript: | -92bp_to_ENST00000320005, NM_019098_5end |
EntrezGene: | CNGB3 |
HGNC: | 2153 |
UniProt: | Q9NQW8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pineal body | 4.61e-131 | 2 |
regional part of epithalamus | 4.61e-131 | 2 |
secretory circumventricular organ | 4.61e-131 | 2 |
circumventricular organ | 4.61e-131 | 2 |
epithalamus | 4.61e-131 | 2 |
gland of diencephalon | 2.40e-66 | 4 |
neuroendocrine gland | 2.40e-66 | 4 |
regional part of diencephalon | 2.40e-66 | 4 |
diencephalon | 1.49e-38 | 7 |
future diencephalon | 1.49e-38 | 7 |
retina | 2.74e-12 | 6 |
photoreceptor array | 2.74e-12 | 6 |
posterior segment of eyeball | 2.74e-12 | 6 |
pre-chordal neural plate | 1.22e-10 | 61 |
endocrine gland | 1.09e-08 | 35 |
neural plate | 3.31e-08 | 82 |
presumptive neural plate | 3.31e-08 | 82 |
neurectoderm | 7.10e-08 | 86 |
regional part of forebrain | 2.04e-07 | 41 |
forebrain | 2.04e-07 | 41 |
anterior neural tube | 2.04e-07 | 41 |
future forebrain | 2.04e-07 | 41 |
endocrine system | 5.42e-07 | 45 |