FFCP PHASE1:Hg19::chr14:22901705..22901750,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000535351,ENST00000537850,ENST00000541008,ENST00000545670,uc001wdt.1_5end | |association_with_transcript=0bp_to_ENST00000535351,ENST00000537850,ENST00000541008,ENST00000545670,uc001wdt.1_5end | ||
|cluster_id=chr14:22901705..22901750,- | |||
|description=CAGE_peak_1_at_ENST00000535351_5end,CAGE_peak_1_at_ENST00000537850_5end,CAGE_peak_1_at_ENST00000541008_5end,CAGE_peak_1_at_ENST00000545670_5end,CAGE_peak_1_at_uc001wdt.1_5end | |description=CAGE_peak_1_at_ENST00000535351_5end,CAGE_peak_1_at_ENST00000537850_5end,CAGE_peak_1_at_ENST00000541008_5end,CAGE_peak_1_at_ENST00000545670_5end,CAGE_peak_1_at_uc001wdt.1_5end | ||
|id=chr14:22901705..22901750,- | |id=chr14:22901705..22901750,- | ||
|ontology_enrichment_celltype=CL:0000624!2.03e-07!6;CL:0000791!3.52e-07!18;CL:0000789!3.52e-07!18;CL:0002420!3.52e-07!18;CL:0002419!3.52e-07!18;CL:0000790!3.52e-07!18;CL:0000128!6.94e-07!7;CL:0000126!6.94e-07!7;CL:0000127!6.94e-07!7;CL:0002453!6.94e-07!7 | |ontology_enrichment_celltype=CL:0000624!2.03e-07!6;CL:0000791!3.52e-07!18;CL:0000789!3.52e-07!18;CL:0002420!3.52e-07!18;CL:0002419!3.52e-07!18;CL:0000790!3.52e-07!18;CL:0000128!6.94e-07!7;CL:0000126!6.94e-07!7;CL:0000127!6.94e-07!7;CL:0002453!6.94e-07!7 | ||
|ontology_enrichment_celltype_v019=CL:0002605;3.58e-12;3!CL:0000128;6.07e-09;7!CL:0000126;6.07e-09;7!CL:0000127;6.07e-09;7!CL:0002549;1.24e-08;2!CL:0000764;2.61e-08;2!CL:0000558;2.61e-08;2 | |ontology_enrichment_celltype_v019=CL:0002605;3.58e-12;3!CL:0000128;6.07e-09;7!CL:0000126;6.07e-09;7!CL:0000127;6.07e-09;7!CL:0002549;1.24e-08;2!CL:0000764;2.61e-08;2!CL:0000558;2.61e-08;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0002605,4.01e-12,3;CL:0000037,4.42e-10,168;CL:0000763,7.67e-10,108;CL:0000049,7.67e-10,108;CL:0002032,8.84e-10,161;CL:0000837,8.84e-10,161;CL:0000988,3.04e-09,177;CL:0000128,6.47e-09,7;CL:0000126,6.47e-09,7;CL:0000127,6.47e-09,7;CL:0002453,6.47e-09,7;CL:0002549,1.24e-08,2;CL:0000764,2.42e-08,2;CL:0000765,2.42e-08,2;CL:0000050,2.42e-08,2;CL:0000038,2.42e-08,2;CL:0000558,2.42e-08,2;CL:0000547,2.42e-08,2;CL:0000549,2.42e-08,2;CL:0000550,2.42e-08,2;CL:0000552,2.42e-08,2 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:8692!2.70e-12!31;DOID:1240!2.14e-09!39;DOID:2531!3.00e-09!51;DOID:0060083!3.00e-09!51 | |ontology_enrichment_disease=DOID:8692!2.70e-12!31;DOID:1240!2.14e-09!39;DOID:2531!3.00e-09!51;DOID:0060083!3.00e-09!51 | ||
|ontology_enrichment_disease_v019=DOID:8692;7.84e-27;31!DOID:1240;9.29e-17;39!DOID:2531;1.06e-13;51!DOID:0060083;1.06e-13;51!DOID:74;2.42e-08;2 | |ontology_enrichment_disease_v019=DOID:8692;7.84e-27;31!DOID:1240;9.29e-17;39!DOID:2531;1.06e-13;51!DOID:0060083;1.06e-13;51!DOID:74;2.42e-08;2 | ||
|ontology_enrichment_disease_v019_2=DOID:8692,3.40e-27,31;DOID:2531,1.74e-21,51;DOID:0060083,1.74e-21,51;DOID:1240,8.58e-21,39;DOID:74,2.17e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!5.96e-07!115 | |ontology_enrichment_uberon=UBERON:0007023!5.96e-07!115 | ||
|ontology_enrichment_uberon_v019=UBERON:0002370;1.11e-08;2!UBERON:0005058;1.11e-08;2!UBERON:0009113;1.11e-08;2!UBERON:0005629;1.24e-08;2!UBERON:0005358;1.24e-08;2!UBERON:0001886;1.24e-08;2!UBERON:0004086;1.24e-08;2!UBERON:0005282;1.24e-08;2!UBERON:0005281;1.24e-08;2!UBERON:0001829;5.39e-08;2!UBERON:0004177;3.40e-07;5!UBERON:0005057;3.40e-07;5 | |ontology_enrichment_uberon_v019=UBERON:0002370;1.11e-08;2!UBERON:0005058;1.11e-08;2!UBERON:0009113;1.11e-08;2!UBERON:0005629;1.24e-08;2!UBERON:0005358;1.24e-08;2!UBERON:0001886;1.24e-08;2!UBERON:0004086;1.24e-08;2!UBERON:0005282;1.24e-08;2!UBERON:0005281;1.24e-08;2!UBERON:0001829;5.39e-08;2!UBERON:0004177;3.40e-07;5!UBERON:0005057;3.40e-07;5 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003408,5.84e-09,10;UBERON:0002370,6.05e-09,4;UBERON:0005058,6.05e-09,4;UBERON:0009113,6.05e-09,4;UBERON:0003295,6.05e-09,4;UBERON:0005562,6.05e-09,4;UBERON:0005629,1.24e-08,2;UBERON:0005358,1.24e-08,2;UBERON:0001886,1.24e-08,2;UBERON:0004086,1.24e-08,2;UBERON:0005282,1.24e-08,2;UBERON:0005281,1.24e-08,2;UBERON:0004177,1.85e-08,7;UBERON:0005057,1.85e-08,7;UBERON:0001829,3.76e-08,2 | |||
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| ||
|short_description=p1@ENST00000535351,p1@ENST00000537850,p1@ENST00000541008,p1@ENST00000545670,p1@uc001wdt.1 | |short_description=p1@ENST00000535351,p1@ENST00000537850,p1@ENST00000541008,p1@ENST00000545670,p1@uc001wdt.1 | ||
}} | }} |
Latest revision as of 19:11, 24 July 2015
Short description: | p1@ENST00000535351, p1@ENST00000537850, p1@ENST00000541008, p1@ENST00000545670, p1@uc001wdt.1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000535351_5end, CAGE_peak_1_at_ENST00000537850_5end, CAGE_peak_1_at_ENST00000541008_5end, CAGE_peak_1_at_ENST00000545670_5end, CAGE_peak_1_at_uc001wdt.1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000535351, ENST00000537850, ENST00000541008, ENST00000545670, uc001wdt.1_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 4.01e-12 | 3 |
hematopoietic stem cell | 4.42e-10 | 168 |
myeloid cell | 7.67e-10 | 108 |
common myeloid progenitor | 7.67e-10 | 108 |
hematopoietic oligopotent progenitor cell | 8.84e-10 | 161 |
hematopoietic multipotent progenitor cell | 8.84e-10 | 161 |
hematopoietic cell | 3.04e-09 | 177 |
oligodendrocyte | 6.47e-09 | 7 |
macroglial cell | 6.47e-09 | 7 |
astrocyte | 6.47e-09 | 7 |
oligodendrocyte precursor cell | 6.47e-09 | 7 |
fibroblast of choroid plexus | 1.24e-08 | 2 |
erythroid lineage cell | 2.42e-08 | 2 |
erythroblast | 2.42e-08 | 2 |
megakaryocyte-erythroid progenitor cell | 2.42e-08 | 2 |
erythroid progenitor cell | 2.42e-08 | 2 |
reticulocyte | 2.42e-08 | 2 |
proerythroblast | 2.42e-08 | 2 |
basophilic erythroblast | 2.42e-08 | 2 |
polychromatophilic erythroblast | 2.42e-08 | 2 |
orthochromatic erythroblast | 2.42e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
gland of gut | 5.84e-09 | 10 |
thymus | 6.05e-09 | 4 |
hemolymphoid system gland | 6.05e-09 | 4 |
thymic region | 6.05e-09 | 4 |
pharyngeal gland | 6.05e-09 | 4 |
thymus primordium | 6.05e-09 | 4 |
vascular plexus | 1.24e-08 | 2 |
ventricle of nervous system | 1.24e-08 | 2 |
choroid plexus | 1.24e-08 | 2 |
brain ventricle | 1.24e-08 | 2 |
ventricular system of brain | 1.24e-08 | 2 |
ventricular system of central nervous system | 1.24e-08 | 2 |
hemopoietic organ | 1.85e-08 | 7 |
immune organ | 1.85e-08 | 7 |
major salivary gland | 3.76e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 3.40e-27 | 31 |
hematologic cancer | 1.74e-21 | 51 |
immune system cancer | 1.74e-21 | 51 |
leukemia | 8.58e-21 | 39 |
hematopoietic system disease | 2.17e-08 | 2 |