FFCP PHASE1:Hg19::chr1:92950138..92950159,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr1:92950138..92950159,-
|short_description=p4@GFI1
|description=CAGE_peak_4_at_GFI1_5end
|association_with_transcript=79bp_to_ENST00000483490_5end
|EntrezGen...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2672 | |EntrezGene=2672 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4237 | |HGNC=4237 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=79bp_to_ENST00000483490_5end | |||
|cluster_id=chr1:92950138..92950159,- | |||
|coexpression_cluster_id=C44 | |||
|description=CAGE_peak_4_at_GFI1_5end | |||
|id=chr1:92950138..92950159,- | |||
|ontology_enrichment_celltype=CL:0000988!3.81e-19!182;CL:0000542!7.94e-19!53;CL:0000051!7.94e-19!53;CL:0000037!1.94e-18!172;CL:0000566!1.94e-18!172;CL:0000838!8.36e-18!52;CL:0000625!6.73e-15!11;CL:0002032!1.12e-14!165;CL:0000837!1.12e-14!165;CL:0000791!3.86e-13!18;CL:0000789!3.86e-13!18;CL:0002420!3.86e-13!18;CL:0002419!3.86e-13!18;CL:0000790!3.86e-13!18;CL:0000084!1.50e-12!25;CL:0000827!1.50e-12!25;CL:0000738!1.28e-09!140;CL:0002031!4.76e-08!124;CL:0002087!1.78e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:0000784;1.52e-13;3!CL:0000625;9.11e-12;11!CL:0000791;2.68e-09;18!CL:0000789;2.68e-09;18!CL:0002419;2.68e-09;18!CL:0000097;2.01e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,2.88e-24,177;CL:0000037,3.89e-21,168;CL:0002032,1.63e-16,161;CL:0000837,1.63e-16,161;CL:0000784,1.53e-13,3;CL:0000625,1.24e-11,11;CL:0000542,8.94e-11,53;CL:0000051,8.94e-11,53;CL:0000838,2.18e-09,52;CL:0000791,3.30e-09,18;CL:0000789,3.30e-09,18;CL:0002420,3.30e-09,18;CL:0002419,3.30e-09,18;CL:0000790,3.30e-09,18;CL:0000738,3.49e-09,136;CL:0000097,1.69e-07,5;CL:0002028,1.69e-07,5;CL:0000763,2.83e-07,108;CL:0000049,2.83e-07,108;CL:0002031,8.98e-07,120 | |||
|ontology_enrichment_development_v019=CL:0000790;2.68e-09;18 | |||
|ontology_enrichment_disease=DOID:1240!6.95e-17!39;DOID:2531!3.82e-16!51;DOID:0060083!3.82e-16!51;DOID:8692!1.54e-12!31 | |||
|ontology_enrichment_disease_v019=DOID:8692;1.71e-17;31!DOID:1240;3.88e-17;39!DOID:2531;3.69e-12;51!DOID:0060083;3.69e-12;51 | |||
|ontology_enrichment_disease_v019_2=DOID:1240,2.67e-21,39;DOID:2531,4.43e-20,51;DOID:0060083,4.43e-20,51;DOID:8692,3.55e-18,31;DOID:0050686,2.82e-07,137 | |||
|ontology_enrichment_uberon=UBERON:0000178!8.02e-08!15;UBERON:0000179!8.02e-08!15;UBERON:0000463!8.02e-08!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;2.22e-08;2!UBERON:0005058;2.22e-08;2!UBERON:0009113;2.22e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,4.86e-09,4;UBERON:0005058,4.86e-09,4;UBERON:0009113,4.86e-09,4;UBERON:0003295,4.86e-09,4;UBERON:0005562,4.86e-09,4 | |||
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| ||
|short_description=p4@GFI1 | |||
}} | }} |
Latest revision as of 20:31, 19 September 2015
Short description: | p4@GFI1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_GFI1_5end |
Coexpression cluster: | C44_Dendritic_CD19_CD133_granulocyte_acute_thymus_immature |
Association with transcript: | 79bp_to_ENST00000483490_5end |
EntrezGene: | GFI1 |
HGNC: | 4237 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 2.88e-24 | 177 |
hematopoietic stem cell | 3.89e-21 | 168 |
hematopoietic oligopotent progenitor cell | 1.63e-16 | 161 |
hematopoietic multipotent progenitor cell | 1.63e-16 | 161 |
plasmacytoid dendritic cell | 1.53e-13 | 3 |
CD8-positive, alpha-beta T cell | 1.24e-11 | 11 |
lymphocyte | 8.94e-11 | 53 |
common lymphoid progenitor | 8.94e-11 | 53 |
lymphoid lineage restricted progenitor cell | 2.18e-09 | 52 |
mature alpha-beta T cell | 3.30e-09 | 18 |
alpha-beta T cell | 3.30e-09 | 18 |
immature T cell | 3.30e-09 | 18 |
mature T cell | 3.30e-09 | 18 |
immature alpha-beta T cell | 3.30e-09 | 18 |
leukocyte | 3.49e-09 | 136 |
mast cell | 1.69e-07 | 5 |
basophil mast progenitor cell | 1.69e-07 | 5 |
myeloid cell | 2.83e-07 | 108 |
common myeloid progenitor | 2.83e-07 | 108 |
hematopoietic lineage restricted progenitor cell | 8.98e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
thymus | 4.86e-09 | 4 |
hemolymphoid system gland | 4.86e-09 | 4 |
thymic region | 4.86e-09 | 4 |
pharyngeal gland | 4.86e-09 | 4 |
thymus primordium | 4.86e-09 | 4 |
Ontology term | p-value | n |
---|---|---|
leukemia | 2.67e-21 | 39 |
hematologic cancer | 4.43e-20 | 51 |
immune system cancer | 4.43e-20 | 51 |
myeloid leukemia | 3.55e-18 | 31 |
organ system cancer | 2.82e-07 | 137 |