FFCP PHASE1:Hg19::chr5:107717058..107717155,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=64839 | |EntrezGene=64839 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13615 | |HGNC=13615 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UF56 | |UniProt=Q9UF56 | ||
|association_with_transcript=0bp_to_ENST00000359660_5end | |association_with_transcript=0bp_to_ENST00000359660_5end | ||
|cluster_id=chr5:107717058..107717155,- | |||
|description=CAGE_peak_1_at_FBXL17_5end | |description=CAGE_peak_1_at_FBXL17_5end | ||
|id=chr5:107717058..107717155,- | |id=chr5:107717058..107717155,- | ||
|ontology_enrichment_celltype=CL:0000791!2.68e-07!18;CL:0000789!2.68e-07!18;CL:0002420!2.68e-07!18;CL:0002419!2.68e-07!18;CL:0000790!2.68e-07!18 | |ontology_enrichment_celltype=CL:0000791!2.68e-07!18;CL:0000789!2.68e-07!18;CL:0002420!2.68e-07!18;CL:0002419!2.68e-07!18;CL:0000790!2.68e-07!18 | ||
|ontology_enrichment_celltype_v019=CL:0000791;2.51e-07;18!CL:0000789;2.51e-07;18!CL:0002419;2.51e-07;18 | |ontology_enrichment_celltype_v019=CL:0000791;2.51e-07;18!CL:0000789;2.51e-07;18!CL:0002419;2.51e-07;18 | ||
|ontology_enrichment_celltype_v019_2=CL:0000791,2.68e-07,18;CL:0000789,2.68e-07,18;CL:0002420,2.68e-07,18;CL:0002419,2.68e-07,18;CL:0000790,2.68e-07,18 | |||
|ontology_enrichment_development_v019=CL:0000790;2.51e-07;18 | |ontology_enrichment_development_v019=CL:0000790;2.51e-07;18 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0007023;2.28e-11;114!UBERON:0002619;5.44e-11;22!UBERON:0001869;1.18e-10;32!UBERON:0001893;1.38e-10;34!UBERON:0002780;1.76e-10;41!UBERON:0001890;1.76e-10;41!UBERON:0001950;2.44e-10;20!UBERON:0002791;2.97e-10;32!UBERON:0003528;4.22e-10;34!UBERON:0002020;4.22e-10;34!UBERON:0000956;1.09e-08;25!UBERON:0000203;1.09e-08;25!UBERON:0000073;7.10e-08;53!UBERON:0002616;7.10e-08;53 | |ontology_enrichment_uberon_v019=UBERON:0007023;2.28e-11;114!UBERON:0002619;5.44e-11;22!UBERON:0001869;1.18e-10;32!UBERON:0001893;1.38e-10;34!UBERON:0002780;1.76e-10;41!UBERON:0001890;1.76e-10;41!UBERON:0001950;2.44e-10;20!UBERON:0002791;2.97e-10;32!UBERON:0003528;4.22e-10;34!UBERON:0002020;4.22e-10;34!UBERON:0000956;1.09e-08;25!UBERON:0000203;1.09e-08;25!UBERON:0000073;7.10e-08;53!UBERON:0002616;7.10e-08;53 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,4.55e-42,114;UBERON:0002780,4.07e-14,41;UBERON:0001890,4.07e-14,41;UBERON:0003080,4.07e-14,41;UBERON:0006240,4.07e-14,41;UBERON:0001049,6.97e-14,56;UBERON:0005068,6.97e-14,56;UBERON:0006241,6.97e-14,56;UBERON:0007135,6.97e-14,56;UBERON:0000073,2.50e-13,53;UBERON:0002616,2.50e-13,53;UBERON:0001893,6.85e-12,34;UBERON:0001869,1.03e-11,32;UBERON:0003528,1.48e-11,34;UBERON:0002020,1.48e-11,34;UBERON:0002791,3.46e-11,32;UBERON:0002619,5.78e-11,22;UBERON:0000955,1.92e-10,68;UBERON:0006238,1.92e-10,68;UBERON:0001950,2.56e-10,20;UBERON:0000956,1.42e-08,25;UBERON:0000203,1.42e-08,25;UBERON:0001017,2.45e-08,81;UBERON:0003075,2.17e-07,82;UBERON:0007284,2.17e-07,82;UBERON:0002346,8.07e-07,86 | |||
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|short_description=p1@FBXL17 | |short_description=p1@FBXL17 | ||
}} | }} |
Latest revision as of 15:26, 19 September 2015
Short description: | p1@FBXL17 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_FBXL17_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000359660_5end |
EntrezGene: | FBXL17 |
HGNC: | 13615 |
UniProt: | Q9UF56 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 2.68e-07 | 18 |
alpha-beta T cell | 2.68e-07 | 18 |
immature T cell | 2.68e-07 | 18 |
mature T cell | 2.68e-07 | 18 |
immature alpha-beta T cell | 2.68e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
adult organism | 4.55e-42 | 114 |
regional part of forebrain | 4.07e-14 | 41 |
forebrain | 4.07e-14 | 41 |
anterior neural tube | 4.07e-14 | 41 |
future forebrain | 4.07e-14 | 41 |
neural tube | 6.97e-14 | 56 |
neural rod | 6.97e-14 | 56 |
future spinal cord | 6.97e-14 | 56 |
neural keel | 6.97e-14 | 56 |
regional part of nervous system | 2.50e-13 | 53 |
regional part of brain | 2.50e-13 | 53 |
telencephalon | 6.85e-12 | 34 |
cerebral hemisphere | 1.03e-11 | 32 |
brain grey matter | 1.48e-11 | 34 |
gray matter | 1.48e-11 | 34 |
regional part of telencephalon | 3.46e-11 | 32 |
regional part of cerebral cortex | 5.78e-11 | 22 |
brain | 1.92e-10 | 68 |
future brain | 1.92e-10 | 68 |
neocortex | 2.56e-10 | 20 |
cerebral cortex | 1.42e-08 | 25 |
pallium | 1.42e-08 | 25 |
central nervous system | 2.45e-08 | 81 |
neural plate | 2.17e-07 | 82 |
presumptive neural plate | 2.17e-07 | 82 |
neurectoderm | 8.07e-07 | 86 |