FFCP PHASE1:Hg19::chr16:53490788..53490807,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:53490788..53490807,+ | |||
|coexpression_cluster_id=C18 | |coexpression_cluster_id=C18 | ||
|description=CAGE_peak_at_chr16:53490788..53490807,+ | |description=CAGE_peak_at_chr16:53490788..53490807,+ | ||
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|ontology_enrichment_celltype=CL:0000791!4.02e-38!18;CL:0000789!4.02e-38!18;CL:0002420!4.02e-38!18;CL:0002419!4.02e-38!18;CL:0000790!4.02e-38!18;CL:0000084!8.30e-32!25;CL:0000827!8.30e-32!25;CL:0000625!3.08e-24!11;CL:0000838!6.51e-20!52;CL:0000542!2.14e-19!53;CL:0000051!2.14e-19!53;CL:0000738!5.31e-14!140;CL:0000624!1.70e-13!6;CL:0002087!1.78e-10!119;CL:0000037!1.80e-09!172;CL:0000566!1.80e-09!172;CL:0000988!2.06e-08!182;CL:0000898!8.23e-08!3;CL:0002032!1.51e-07!165;CL:0000837!1.51e-07!165;CL:0002031!2.01e-07!124;CL:0000842!3.77e-07!3;CL:0000623!4.56e-07!3;CL:0000825!4.56e-07!3;CL:0000767!8.17e-07!3 | |ontology_enrichment_celltype=CL:0000791!4.02e-38!18;CL:0000789!4.02e-38!18;CL:0002420!4.02e-38!18;CL:0002419!4.02e-38!18;CL:0000790!4.02e-38!18;CL:0000084!8.30e-32!25;CL:0000827!8.30e-32!25;CL:0000625!3.08e-24!11;CL:0000838!6.51e-20!52;CL:0000542!2.14e-19!53;CL:0000051!2.14e-19!53;CL:0000738!5.31e-14!140;CL:0000624!1.70e-13!6;CL:0002087!1.78e-10!119;CL:0000037!1.80e-09!172;CL:0000566!1.80e-09!172;CL:0000988!2.06e-08!182;CL:0000898!8.23e-08!3;CL:0002032!1.51e-07!165;CL:0000837!1.51e-07!165;CL:0002031!2.01e-07!124;CL:0000842!3.77e-07!3;CL:0000623!4.56e-07!3;CL:0000825!4.56e-07!3;CL:0000767!8.17e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000791;1.21e-59;18!CL:0000789;1.21e-59;18!CL:0002419;1.21e-59;18!CL:0000084;2.86e-46;25!CL:0000625;1.33e-37;11!CL:0000624;2.26e-20;6!CL:0000542;6.77e-14;53!CL:0000898;1.94e-11;3!CL:0000226;1.59e-10;3!CL:0000842;1.59e-10;3!CL:0000623;2.22e-10;3!CL:0000815;3.93e-08;2!CL:0000792;3.93e-08;2!CL:0002677;3.93e-08;2 | |ontology_enrichment_celltype_v019=CL:0000791;1.21e-59;18!CL:0000789;1.21e-59;18!CL:0002419;1.21e-59;18!CL:0000084;2.86e-46;25!CL:0000625;1.33e-37;11!CL:0000624;2.26e-20;6!CL:0000542;6.77e-14;53!CL:0000898;1.94e-11;3!CL:0000226;1.59e-10;3!CL:0000842;1.59e-10;3!CL:0000623;2.22e-10;3!CL:0000815;3.93e-08;2!CL:0000792;3.93e-08;2!CL:0002677;3.93e-08;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0000791,7.95e-60,18;CL:0000789,7.95e-60,18;CL:0002420,7.95e-60,18;CL:0002419,7.95e-60,18;CL:0000790,7.95e-60,18;CL:0000084,2.12e-46,25;CL:0000827,2.12e-46,25;CL:0000625,1.20e-37,11;CL:0000838,7.46e-27,52;CL:0000542,3.08e-26,53;CL:0000051,3.08e-26,53;CL:0000624,1.61e-20,6;CL:0002087,2.77e-12,115;CL:0000898,1.72e-11,3;CL:0000738,1.78e-11,136;CL:0000226,1.91e-10,3;CL:0000842,1.91e-10,3;CL:0000623,2.58e-10,3;CL:0000825,2.58e-10,3;CL:0002031,1.88e-08,120;CL:0000815,3.66e-08,2;CL:0000792,3.66e-08,2;CL:0002677,3.66e-08,2;CL:0000893,3.80e-08,2;CL:0002489,3.80e-08,2;CL:0000809,3.80e-08,2;CL:0000808,3.80e-08,2;CL:0000894,3.80e-08,2;CL:0000806,3.80e-08,2;CL:0000807,3.80e-08,2;CL:0000805,3.80e-08,2;CL:0002425,3.80e-08,2;CL:0000037,4.06e-08,168;CL:0000988,2.11e-07,177 | |||
|ontology_enrichment_development_v019=CL:0000790;1.21e-59;18!CL:0000051;6.77e-14;53!CL:0002425;3.86e-08;2 | |ontology_enrichment_development_v019=CL:0000790;1.21e-59;18!CL:0000051;6.77e-14;53!CL:0002425;3.86e-08;2 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!1.00e-15!15;UBERON:0000179!1.00e-15!15;UBERON:0000463!1.00e-15!15;UBERON:0004177!2.04e-10!7;UBERON:0002370!3.65e-09!4;UBERON:0005058!3.65e-09!4;UBERON:0009113!3.65e-09!4;UBERON:0003295!3.65e-09!4;UBERON:0005562!3.65e-09!4;UBERON:0001042!3.94e-07!10;UBERON:0009145!3.94e-07!10 | |ontology_enrichment_uberon=UBERON:0000178!1.00e-15!15;UBERON:0000179!1.00e-15!15;UBERON:0000463!1.00e-15!15;UBERON:0004177!2.04e-10!7;UBERON:0002370!3.65e-09!4;UBERON:0005058!3.65e-09!4;UBERON:0009113!3.65e-09!4;UBERON:0003295!3.65e-09!4;UBERON:0005562!3.65e-09!4;UBERON:0001042!3.94e-07!10;UBERON:0009145!3.94e-07!10 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;5.37e-25;15!UBERON:0000179;5.37e-25;15!UBERON:0000463;5.37e-25;15!UBERON:0002390;9.86e-12;32!UBERON:0002193;5.18e-10;42 | |ontology_enrichment_uberon_v019=UBERON:0000178;5.37e-25;15!UBERON:0000179;5.37e-25;15!UBERON:0000463;5.37e-25;15!UBERON:0002390;9.86e-12;32!UBERON:0002193;5.18e-10;42 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,6.62e-25,15;UBERON:0000179,6.62e-25,15;UBERON:0000463,6.62e-25,15;UBERON:0002370,2.58e-08,4;UBERON:0005058,2.58e-08,4;UBERON:0009113,2.58e-08,4;UBERON:0003295,2.58e-08,4;UBERON:0005562,2.58e-08,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0.0821005894499457,0,1.57345710739562,1.53531759238885,0.464448369948228,0,0,0,0,0.284338464974843,0,0.553995408531877,0.200544447470142,0.217010870715852,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521482918420201,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.50787356318733,1.96505381374582,3.90642848099067,15.5483440713331,6.8443675993054,6.15482147455153,11.6896037044747,14.3719489381874,7.65975359434577,8.4182879941776,7.58250818542044,4.48319619039863,4.1618991219161,8.22189523018381,12.1594007825773,21.7352314301289,12.159498179289,13.1095005763959,17.7710390468461,18.016185488913,8.43085085924227,5.84166657320471,15.1811815211702,11.1497895013434,11.7195021694155,9.50452044448374,9.78738274005523,14.8464468939125,23.7368380449457,11.8388626022008,4.92676798152628,4.03213486449465,2.67440195783507,2.89648807765598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.26800176769578,2.1673383622212,2.80315847317372,1.41177339907723,0,0,0,0,0,0.749007023947182,0,0.828831026872071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.75566460082641,1.2942852049117,2.66818894508611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.5968189200182,1.52927441428475,3.41788312304498,2.85878130549347,7.4045209155515,2.59389324477087,8.10047155857172,3.17250070517708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44876399560722,0,0,0,0,0,0,0,0,0,0,2.76283915531148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915975934018623,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0.611030144933625,0,0,0,0.067401132980677,0.802577647298789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0.717873024576814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.415440338029185,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0.471612915298998,0.828478110694391,2.97699613087171,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.389720617678777,0.265729680626726,0,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0.469919589899268,0.322289439867886,0,0,0,0,0,1.37618785021362,0,0,0,0,1.0580536810308,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23806443146374,1.48554492622814,0.993195428733726,0,0,0,0.217716747896961,0,1.54909721933551,0.143444410785353,0,0,0,0,0,0,0.122241444182866,0,0,1.40891655513718,0 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| ||
|short_description=p@chr16:53490788..53490807,+ | |short_description=p@chr16:53490788..53490807,+ | ||
}} | }} |
Latest revision as of 09:46, 25 July 2015
Short description: | p@chr16:53490788..53490807, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:53490788..53490807, + |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
blood | 6.62e-25 | 15 |
haemolymphatic fluid | 6.62e-25 | 15 |
organism substance | 6.62e-25 | 15 |
thymus | 2.58e-08 | 4 |
hemolymphoid system gland | 2.58e-08 | 4 |
thymic region | 2.58e-08 | 4 |
pharyngeal gland | 2.58e-08 | 4 |
thymus primordium | 2.58e-08 | 4 |