FFCP PHASE1:Hg19::chr2:97426605..97426616,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=26504 | |EntrezGene=26504 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=105 | |HGNC=105 | ||
|TSSclassifier=strong | |||
|UniProt=Q6P4Q7 | |UniProt=Q6P4Q7 | ||
|association_with_transcript=-22bp_to_ENST00000377075,NM_020184,uc002swx.2_5end | |association_with_transcript=-22bp_to_ENST00000377075,NM_020184,uc002swx.2_5end | ||
|cluster_id=chr2:97426605..97426616,+ | |||
|description=CAGE_peak_2_at_CNNM4_5end | |description=CAGE_peak_2_at_CNNM4_5end | ||
|id=chr2:97426605..97426616,+ | |id=chr2:97426605..97426616,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0001893;2.15e-07;34!UBERON:0001869;2.97e-07;32 | |ontology_enrichment_uberon_v019=UBERON:0001893;2.15e-07;34!UBERON:0001869;2.97e-07;32 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.73e-09,81;UBERON:0001893,8.62e-09,34;UBERON:0001869,1.51e-08,32;UBERON:0001049,2.10e-08,56;UBERON:0005068,2.10e-08,56;UBERON:0006241,2.10e-08,56;UBERON:0007135,2.10e-08,56;UBERON:0001016,2.51e-08,89;UBERON:0000073,2.81e-08,53;UBERON:0002616,2.81e-08,53;UBERON:0000955,6.81e-08,68;UBERON:0006238,6.81e-08,68;UBERON:0002780,1.92e-07,41;UBERON:0001890,1.92e-07,41;UBERON:0003080,1.92e-07,41;UBERON:0006240,1.92e-07,41;UBERON:0002791,2.40e-07,32;UBERON:0001950,3.80e-07,20;UBERON:0002346,5.64e-07,86;UBERON:0003075,5.84e-07,82;UBERON:0007284,5.84e-07,82 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0.281908808191942,1.0007329835313,0,0.872338524100369,0,0,0,0.491467873003018,0.697801167972428,0.655324116390517,1.05506791291381,0.247532705920093,0,0.672325146451775,0,1.46062018077475,0,1.72369481307503,1.42800483870977,2.19418305034661,0.572471974262113,0.136874425072884,1.12988375635323,0.534893840235659,0.738905305049512,0.236132343941038,1.57345710739562,1.15148819429164,0.928896739896456,0.919421224478927,0,0,0.619737604642413,0.284338464974843,0.587200878669695,0.553995408531877,1.40381113229099,0.434021741431704,0.447830948479849,0.32389366601898,0.257575567634187,0.145398238779565,0.377875943688809,0.727752183563449,0.464858073811369,0,0,0.28769239232215,0.768482119587302,0,0.689491361473237,0,1.35426486594342,0.188242339542605,0.272906150057846,0,0,0.320929027076094,0,0.329851300186716,0,0.426224750532694,1.16083695451434,0.56738522469114,0,0.251248665256743,0,0.65156653411535,0,0.368277635987565,0,0.422510572623884,0.425208599930087,0,0.112328631146495,0.450530678524519,0.32145117339416,0,0.59675003159727,0.547992461293902,0,0.546138611262131,0.889509253863555,1.28019066769952,1.60158394814405,0.574752439954483,0.661044872784862,0,1.1384259382189,1.17447437874188,0.764546456250458,3.96513985737078,1.68152568894461,0.263384084775077,0.590129310341499,1.17903228824749,1.64481199199607,0.501559486172034,0,0,0,0.557052284425868,0.294605907474837,0.664601683750863,0.812411591295047,0.640456598628376,1.43065282315866,0.493313713811028,0.276350017785848,1.44901542867526,0.889719378972363,0.535081656179426,1.04535523804977,1.13309342697566,0.766440987203842,1.71813722741315,0.253019692019503,0.318565414324097,0.651083453856419,0.950452044448374,1.05402583354441,0.895906278080929,1.24930726552346,0.710331756132051,0,1.61285394579786,1.60464117470104,1.30341963494519,0,1.34140171940727,0.383587685530591,0,1.00267582127178,0,0,0.486634870302636,0.756278537312543,0.443458794925128,0.790513071238134,0.851363990735132,0.728590576585084,0.741568885568859,0.649094787309367,0.174129737299267,0,0.953962497221368,2.28797964312051,1.11437250398869,0.596287222100115,0.860234595106124,0,0,0.838998872419812,0.550236083880135,0,0.258416759169329,0.35576626268671,0.66944122552934,0.805658634218294,0,0.24406205754817,1.10298924103761,0,0.357198913136319,0.673588117878509,0.225222960966644,0,0,0.366403487860815,2.63560834872127,0,1.3082821564276,0.496971951695318,0.12663051166458,0.132409180813219,0.573673241497627,0,0.560677600142307,1.06748995729705,0.24666754841716,0,0.134710672069688,0.653847612453835,1.05950199351452,0.576175924479999,0.234321431833797,0,0.570471821544449,0.448346041655403,0.23486899728753,0.323745888736263,0.421352420106746,0.204154171254893,0,0.103325781175765,0,0.247266929278557,2.73048408581408,0,0.336672227908132,0.125118519871964,0.277064115484183,0,0.612975591598039,0.751190294532984,0.113432183160021,0.358779271377724,0,0.211931901159562,1.20036438433761,0,0.515281080091258,0.37223371266318,1.0126579934476,0.779496041289589,1.26216887122057,0.460249493211497,0.80823028409406,0.355009592516614,0.403008392910561,0,0.193260853163297,0,0.860413786167011,0.365921118388786,0.530119073285941,0.116193942869518,0.207322110030741,0.252320850875628,1.09493207722749,0,0.643240938192885,0,1.39310378409594,0.721879481669586,0.236613600079688,0.168584690078102,0.241011029883482,0.220587945464788,0.435758888184812,0.474541238222193,0.134831308160164,0,0,0,1.40241773803446,0.8231480226628,1.47008711385542,0,0.982827216677626,0,0.441463099414651,0.368965315629341,0,0.439001141634502,0,0.402115889646523,0.370353780634118,0,1.03993478527958,0,0.463721619900307,0.234817388471643,1.15493158208859,0.925971025153221,0.761016608938393,2.37061319387782,1.71697232418975,0,0.234004265139238,0.445893486866185,0,0.335964256397719,0.567100388969546,0.358234090811393,0.290633938513962,0,0,1.05658120815871,1.4512968087854,0.288239906833923,0.75745460055828,0.190493682876507,0.381988425558278,3.51652341630141,6.84289784090821,0.308482478109971,0,0.285826432630578,1.00917975910825,0.87192013766656,0.07333828582095,0.775630294546667,0,0,0.797814349754612,1.04007436911366,0.514414748524284,0,1.3321108950805,0.285955987316295,0.542621605391443,0.823240336780769,0.325736184293735,0.355391948742546,0,0,0,0.399891964728228,1.2162378064119,0.502257091432126,0,0.718874566474748,0,0,0.144781306667579,0.821905290201534,0.537182889719687,1.00876629594175,0.591092280605782,0.862510299438069,1.28343036279748,1.27047312111232,0,1.54657762555539,1.67516265334349,1.27587750330633,0,0,0.828831026872071,0.49076596687656,0.500170521059677,0,0.831883446123229,0,1.10391690523754,0.702848489956279,0.902838299183157,0,0,1.99267679560631,0.553107505625109,0.260650843404249,1.17480694477644,1.02943027143257,0.82707210449155,0.647142602455851,0.74709290462411,0,1.66435439510497,0,0.496215615637554,0,0.561320188866147,0.256278298511402,0.511707249066704,0,0,0,0,0.328508624055237,0,0.34863113537987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|short_description=p2@CNNM4 | |short_description=p2@CNNM4 | ||
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Latest revision as of 01:37, 19 September 2015
Short description: | p2@CNNM4 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CNNM4_5end |
Coexpression cluster: | NA |
Association with transcript: | -22bp_to_ENST00000377075, NM_020184, uc002swx.2_5end |
EntrezGene: | CNNM4 |
HGNC: | 105 |
UniProt: | Q6P4Q7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
central nervous system | 2.73e-09 | 81 |
telencephalon | 8.62e-09 | 34 |
cerebral hemisphere | 1.51e-08 | 32 |
neural tube | 2.10e-08 | 56 |
neural rod | 2.10e-08 | 56 |
future spinal cord | 2.10e-08 | 56 |
neural keel | 2.10e-08 | 56 |
nervous system | 2.51e-08 | 89 |
regional part of nervous system | 2.81e-08 | 53 |
regional part of brain | 2.81e-08 | 53 |
brain | 6.81e-08 | 68 |
future brain | 6.81e-08 | 68 |
regional part of forebrain | 1.92e-07 | 41 |
forebrain | 1.92e-07 | 41 |
anterior neural tube | 1.92e-07 | 41 |
future forebrain | 1.92e-07 | 41 |
regional part of telencephalon | 2.40e-07 | 32 |
neocortex | 3.80e-07 | 20 |
neurectoderm | 5.64e-07 | 86 |
neural plate | 5.84e-07 | 82 |
presumptive neural plate | 5.84e-07 | 82 |