FFCP PHASE1:Hg19::chr8:22549185..22549196,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr8:22549185..22549196,- | |||
|coexpression_cluster_id=C3 | |coexpression_cluster_id=C3 | ||
|description=CAGE_peak_at_chr8:22549185..22549196,- | |description=CAGE_peak_at_chr8:22549185..22549196,- | ||
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|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001869!1.38e-79!32;UBERON:0001893!9.56e-75!34;UBERON:0002780!8.88e-73!41;UBERON:0001890!8.88e-73!41;UBERON:0006240!8.88e-73!41;UBERON:0003080!5.86e-71!42;UBERON:0002619!1.17e-70!22;UBERON:0002791!2.09e-70!33;UBERON:0002020!2.98e-68!34;UBERON:0003528!2.98e-68!34;UBERON:0000956!4.91e-62!25;UBERON:0000203!4.91e-62!25;UBERON:0001950!5.15e-61!20;UBERON:0003056!1.61e-51!61;UBERON:0001049!3.48e-51!57;UBERON:0005068!3.48e-51!57;UBERON:0006241!3.48e-51!57;UBERON:0007135!3.48e-51!57;UBERON:0002616!2.71e-49!59;UBERON:0000955!1.54e-44!69;UBERON:0006238!1.54e-44!69;UBERON:0001017!3.75e-43!82;UBERON:0003075!3.23e-41!86;UBERON:0007284!3.23e-41!86;UBERON:0005743!6.44e-41!86;UBERON:0002346!3.84e-39!90;UBERON:0000073!1.46e-36!94;UBERON:0001016!1.46e-36!94;UBERON:0007023!6.87e-30!115;UBERON:0000033!5.39e-27!123;UBERON:0000153!1.76e-25!129;UBERON:0007811!1.76e-25!129;UBERON:0001871!6.27e-24!7;UBERON:0000200!3.00e-22!6;UBERON:0000369!2.54e-21!4;UBERON:0002435!2.54e-21!4;UBERON:0000204!2.54e-21!4;UBERON:0010082!2.54e-21!4;UBERON:0004121!1.59e-19!169;UBERON:0000924!6.12e-19!173;UBERON:0006601!6.12e-19!173;UBERON:0000349!2.20e-17!5;UBERON:0002771!3.25e-17!3;UBERON:0002021!3.95e-17!5;UBERON:0001872!6.22e-17!5;UBERON:0005383!1.11e-16!3;UBERON:0005382!1.11e-16!3;UBERON:0002420!1.13e-14!9;UBERON:0007245!1.13e-14!9;UBERON:0010009!1.13e-14!9;UBERON:0010011!1.13e-14!9;UBERON:0000454!1.13e-14!9;UBERON:0000025!1.03e-13!194;UBERON:0009663!3.00e-12!7;UBERON:0001873!8.83e-12!2;UBERON:0001954!8.83e-12!2;UBERON:0003022!8.83e-12!2;UBERON:0002421!8.83e-12!2;UBERON:0002600!8.83e-12!2;UBERON:0010122!8.83e-12!2;UBERON:0002360!2.81e-11!2;UBERON:0000094!2.81e-11!2;UBERON:0007645!2.81e-11!2;UBERON:0004111!6.40e-10!241;UBERON:0002308!1.51e-09!9;UBERON:0000125!1.51e-09!9;UBERON:0000064!2.04e-09!219;UBERON:0000483!7.62e-09!309;UBERON:0000119!1.06e-08!312;UBERON:0000477!2.65e-08!286;UBERON:0000475!3.02e-07!365;UBERON:0002902!6.96e-07!1;UBERON:0009899!6.96e-07!1;UBERON:0002022!9.15e-07!1 | |ontology_enrichment_uberon=UBERON:0001869!1.38e-79!32;UBERON:0001893!9.56e-75!34;UBERON:0002780!8.88e-73!41;UBERON:0001890!8.88e-73!41;UBERON:0006240!8.88e-73!41;UBERON:0003080!5.86e-71!42;UBERON:0002619!1.17e-70!22;UBERON:0002791!2.09e-70!33;UBERON:0002020!2.98e-68!34;UBERON:0003528!2.98e-68!34;UBERON:0000956!4.91e-62!25;UBERON:0000203!4.91e-62!25;UBERON:0001950!5.15e-61!20;UBERON:0003056!1.61e-51!61;UBERON:0001049!3.48e-51!57;UBERON:0005068!3.48e-51!57;UBERON:0006241!3.48e-51!57;UBERON:0007135!3.48e-51!57;UBERON:0002616!2.71e-49!59;UBERON:0000955!1.54e-44!69;UBERON:0006238!1.54e-44!69;UBERON:0001017!3.75e-43!82;UBERON:0003075!3.23e-41!86;UBERON:0007284!3.23e-41!86;UBERON:0005743!6.44e-41!86;UBERON:0002346!3.84e-39!90;UBERON:0000073!1.46e-36!94;UBERON:0001016!1.46e-36!94;UBERON:0007023!6.87e-30!115;UBERON:0000033!5.39e-27!123;UBERON:0000153!1.76e-25!129;UBERON:0007811!1.76e-25!129;UBERON:0001871!6.27e-24!7;UBERON:0000200!3.00e-22!6;UBERON:0000369!2.54e-21!4;UBERON:0002435!2.54e-21!4;UBERON:0000204!2.54e-21!4;UBERON:0010082!2.54e-21!4;UBERON:0004121!1.59e-19!169;UBERON:0000924!6.12e-19!173;UBERON:0006601!6.12e-19!173;UBERON:0000349!2.20e-17!5;UBERON:0002771!3.25e-17!3;UBERON:0002021!3.95e-17!5;UBERON:0001872!6.22e-17!5;UBERON:0005383!1.11e-16!3;UBERON:0005382!1.11e-16!3;UBERON:0002420!1.13e-14!9;UBERON:0007245!1.13e-14!9;UBERON:0010009!1.13e-14!9;UBERON:0010011!1.13e-14!9;UBERON:0000454!1.13e-14!9;UBERON:0000025!1.03e-13!194;UBERON:0009663!3.00e-12!7;UBERON:0001873!8.83e-12!2;UBERON:0001954!8.83e-12!2;UBERON:0003022!8.83e-12!2;UBERON:0002421!8.83e-12!2;UBERON:0002600!8.83e-12!2;UBERON:0010122!8.83e-12!2;UBERON:0002360!2.81e-11!2;UBERON:0000094!2.81e-11!2;UBERON:0007645!2.81e-11!2;UBERON:0004111!6.40e-10!241;UBERON:0002308!1.51e-09!9;UBERON:0000125!1.51e-09!9;UBERON:0000064!2.04e-09!219;UBERON:0000483!7.62e-09!309;UBERON:0000119!1.06e-08!312;UBERON:0000477!2.65e-08!286;UBERON:0000475!3.02e-07!365;UBERON:0002902!6.96e-07!1;UBERON:0009899!6.96e-07!1;UBERON:0002022!9.15e-07!1 | ||
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|short_description=p@chr8:22549185..22549196,- | |short_description=p@chr8:22549185..22549196,- | ||
}} | }} |
Latest revision as of 17:00, 31 July 2015
Short description: | p@chr8:22549185..22549196, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr8:22549185..22549196, - |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
occipital pole | 2.37e-29 | 1 |
pole of cerebral hemisphere | 2.37e-29 | 1 |
neocortex | 5.19e-22 | 20 |
regional part of cerebral cortex | 3.75e-20 | 22 |
gyrus | 9.49e-20 | 6 |
cerebral cortex | 6.73e-18 | 25 |
pallium | 6.73e-18 | 25 |
temporal lobe | 2.90e-17 | 6 |
amygdala | 1.15e-15 | 2 |
middle temporal gyrus | 1.78e-15 | 2 |
middle frontal gyrus | 2.37e-15 | 2 |
meninx | 2.74e-15 | 2 |
membrane organ | 2.74e-15 | 2 |
meningeal cluster | 2.74e-15 | 2 |
regional part of telencephalon | 3.18e-14 | 32 |
cerebral hemisphere | 3.18e-14 | 32 |
brain grey matter | 1.92e-13 | 34 |
gray matter | 1.92e-13 | 34 |
telencephalon | 1.92e-13 | 34 |
central nervous system | 1.64e-12 | 81 |
nervous system | 2.61e-11 | 89 |
regional part of forebrain | 2.75e-11 | 41 |
forebrain | 2.75e-11 | 41 |
anterior neural tube | 2.75e-11 | 41 |
future forebrain | 2.75e-11 | 41 |
frontal cortex | 1.09e-10 | 3 |
brain | 1.82e-10 | 68 |
future brain | 1.82e-10 | 68 |
regional part of nervous system | 6.97e-09 | 53 |
regional part of brain | 6.97e-09 | 53 |
neural tube | 1.94e-08 | 56 |
neural rod | 1.94e-08 | 56 |
future spinal cord | 1.94e-08 | 56 |
neural keel | 1.94e-08 | 56 |
pre-chordal neural plate | 8.61e-08 | 61 |
limbic system | 4.79e-07 | 5 |
occipital lobe | 6.04e-07 | 5 |