FFCP PHASE1:Hg19::chr20:44641109..44641122,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr20:44641109..44641122,+ | |||
|coexpression_cluster_id=C71 | |coexpression_cluster_id=C71 | ||
|description=CAGE_peak_at_chr20:44641109..44641122,+ | |description=CAGE_peak_at_chr20:44641109..44641122,+ | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002009!1.62e-26!65;CL:0000766!2.58e-26!76;CL:0002194!5.76e-25!63;CL:0000576!5.76e-25!63;CL:0000040!5.76e-25!63;CL:0000559!5.76e-25!63;CL:0000557!8.65e-24!71;CL:0000839!6.40e-22!70;CL:0000763!1.62e-20!112;CL:0000049!1.62e-20!112;CL:0002057!3.98e-18!42;CL:0000860!1.16e-16!45;CL:0000235!4.51e-14!10;CL:0000738!8.50e-14!140;CL:0000775!1.69e-12!3;CL:0002032!1.10e-11!165;CL:0000837!1.10e-11!165;CL:0002031!3.65e-11!124;CL:0000037!6.23e-11!172;CL:0000566!6.23e-11!172;CL:0002087!1.21e-10!119;CL:0000988!5.83e-10!182 | |ontology_enrichment_celltype=CL:0002009!1.62e-26!65;CL:0000766!2.58e-26!76;CL:0002194!5.76e-25!63;CL:0000576!5.76e-25!63;CL:0000040!5.76e-25!63;CL:0000559!5.76e-25!63;CL:0000557!8.65e-24!71;CL:0000839!6.40e-22!70;CL:0000763!1.62e-20!112;CL:0000049!1.62e-20!112;CL:0002057!3.98e-18!42;CL:0000860!1.16e-16!45;CL:0000235!4.51e-14!10;CL:0000738!8.50e-14!140;CL:0000775!1.69e-12!3;CL:0002032!1.10e-11!165;CL:0000837!1.10e-11!165;CL:0002031!3.65e-11!124;CL:0000037!6.23e-11!172;CL:0000566!6.23e-11!172;CL:0002087!1.21e-10!119;CL:0000988!5.83e-10!182 | ||
|ontology_enrichment_celltype_v019=CL:0000235;1.19e-85;6!CL:0000775;7.51e-20;3!CL:0000473;2.57e-11;39!CL:0000234;2.57e-11;39!CL:0000840;2.35e-10;5!CL:0001014;2.00e-08;2!CL:0001016;2.00e-08;2!CL:0000047;2.57e-08;2!CL:0000094;4.91e-08;8!CL:0000990;3.39e-07;8!CL:0000766;7.83e-07;69 | |ontology_enrichment_celltype_v019=CL:0000235;1.19e-85;6!CL:0000775;7.51e-20;3!CL:0000473;2.57e-11;39!CL:0000234;2.57e-11;39!CL:0000840;2.35e-10;5!CL:0001014;2.00e-08;2!CL:0001016;2.00e-08;2!CL:0000047;2.57e-08;2!CL:0000094;4.91e-08;8!CL:0000990;3.39e-07;8!CL:0000766;7.83e-07;69 | ||
|ontology_enrichment_celltype_v019_2=CL:0000235,1.19e-85,6;CL:0000775,6.50e-20,3;CL:0000766,5.04e-15,72;CL:0002009,4.15e-14,61;CL:0000557,8.39e-13,67;CL:0000763,4.19e-12,108;CL:0000049,4.19e-12,108;CL:0002194,3.04e-11,59;CL:0000576,3.04e-11,59;CL:0000040,3.04e-11,59;CL:0000559,3.04e-11,59;CL:0000473,1.44e-10,48;CL:0000234,1.44e-10,48;CL:0000840,2.29e-10,5;CL:0001029,2.29e-10,5;CL:0000839,5.16e-10,66;CL:0000738,2.08e-09,136;CL:0001014,2.00e-08,2;CL:0001016,2.00e-08,2;CL:0000094,4.66e-08,8;CL:0002032,8.83e-08,161;CL:0000837,8.83e-08,161;CL:0000037,2.07e-07,168;CL:0000990,3.34e-07,8;CL:0000988,5.62e-07,177;CL:0002031,7.32e-07,120 | |||
|ontology_enrichment_development_v019=UBERON:0006965;2.57e-08;2 | |ontology_enrichment_development_v019=UBERON:0006965;2.57e-08;2 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.84e-20!80;UBERON:0002390!1.69e-19!102;UBERON:0003061!1.69e-19!102;UBERON:0002193!8.67e-19!112;UBERON:0001474!1.25e-18!86;UBERON:0002405!3.96e-15!115;UBERON:0004765!5.29e-15!101;UBERON:0001434!5.29e-15!101;UBERON:0002204!1.70e-08!167;UBERON:0003081!4.32e-08!216 | |ontology_enrichment_uberon=UBERON:0002371!1.84e-20!80;UBERON:0002390!1.69e-19!102;UBERON:0003061!1.69e-19!102;UBERON:0002193!8.67e-19!112;UBERON:0001474!1.25e-18!86;UBERON:0002405!3.96e-15!115;UBERON:0004765!5.29e-15!101;UBERON:0001434!5.29e-15!101;UBERON:0002204!1.70e-08!167;UBERON:0003081!4.32e-08!216 | ||
|ontology_enrichment_uberon_v019=UBERON:0000029;2.56e-15;1 | |ontology_enrichment_uberon_v019=UBERON:0000029;2.56e-15;1 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000029,2.75e-15,1;UBERON:0002405,1.93e-11,93;UBERON:0002371,3.19e-11,76;UBERON:0001474,2.33e-10,82;UBERON:0002193,9.71e-10,108;UBERON:0004765,2.21e-09,90;UBERON:0002390,1.46e-08,98;UBERON:0003061,1.46e-08,98;UBERON:0001434,2.24e-08,100 | |||
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| ||
|short_description=p@chr20:44641109..44641122,+ | |short_description=p@chr20:44641109..44641122,+ | ||
}} | }} |
Latest revision as of 14:38, 28 July 2015
Short description: | p@chr20:44641109..44641122, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:44641109..44641122, + |
Coexpression cluster: | C71_Monocytederived_Macrophage_CD14_Dendritic_Osteoblast_leiomyoma_Prostate |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage | 1.19e-85 | 6 |
neutrophil | 6.50e-20 | 3 |
myeloid leukocyte | 5.04e-15 | 72 |
macrophage dendritic cell progenitor | 4.15e-14 | 61 |
granulocyte monocyte progenitor cell | 8.39e-13 | 67 |
myeloid cell | 4.19e-12 | 108 |
common myeloid progenitor | 4.19e-12 | 108 |
monopoietic cell | 3.04e-11 | 59 |
monocyte | 3.04e-11 | 59 |
monoblast | 3.04e-11 | 59 |
promonocyte | 3.04e-11 | 59 |
defensive cell | 1.44e-10 | 48 |
phagocyte | 1.44e-10 | 48 |
immature conventional dendritic cell | 2.29e-10 | 5 |
common dendritic progenitor | 2.29e-10 | 5 |
myeloid lineage restricted progenitor cell | 5.16e-10 | 66 |
leukocyte | 2.08e-09 | 136 |
CD1a-positive Langerhans cell | 2.00e-08 | 2 |
immature CD1a-positive Langerhans cell | 2.00e-08 | 2 |
granulocyte | 4.66e-08 | 8 |
hematopoietic oligopotent progenitor cell | 8.83e-08 | 161 |
hematopoietic multipotent progenitor cell | 8.83e-08 | 161 |
hematopoietic stem cell | 2.07e-07 | 168 |
conventional dendritic cell | 3.34e-07 | 8 |
hematopoietic cell | 5.62e-07 | 177 |
hematopoietic lineage restricted progenitor cell | 7.32e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
lymph node | 2.75e-15 | 1 |
immune system | 1.93e-11 | 93 |
bone marrow | 3.19e-11 | 76 |
bone element | 2.33e-10 | 82 |
hemolymphoid system | 9.71e-10 | 108 |
skeletal element | 2.21e-09 | 90 |
hematopoietic system | 1.46e-08 | 98 |
blood island | 1.46e-08 | 98 |
skeletal system | 2.24e-08 | 100 |