FFCP PHASE1:Hg19::chr21:34602680..34602705,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3455 | |EntrezGene=3455 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5433 | |HGNC=5433 | ||
|TSSclassifier=strong | |||
|UniProt=C9JM33 | |UniProt=C9JM33 | ||
|association_with_transcript=-8bp_to_ENST00000447980_5end | |association_with_transcript=-8bp_to_ENST00000447980_5end | ||
|cluster_id=chr21:34602680..34602705,+ | |||
|coexpression_cluster_id=C344 | |coexpression_cluster_id=C344 | ||
|description=CAGE_peak_4_at_IFNAR2_5end | |description=CAGE_peak_4_at_IFNAR2_5end | ||
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|ontology_enrichment_celltype=CL:0000766!8.21e-27!76;CL:0002194!2.27e-24!63;CL:0000576!2.27e-24!63;CL:0000040!2.27e-24!63;CL:0000559!2.27e-24!63;CL:0000738!4.40e-23!140;CL:0002057!9.14e-23!42;CL:0000557!1.14e-22!71;CL:0002009!1.24e-22!65;CL:0000839!3.72e-22!70;CL:0000037!6.49e-22!172;CL:0000566!6.49e-22!172;CL:0000988!3.18e-21!182;CL:0000860!4.12e-21!45;CL:0002087!5.56e-21!119;CL:0000763!7.78e-21!112;CL:0000049!7.78e-21!112;CL:0002032!3.12e-20!165;CL:0000837!3.12e-20!165;CL:0002031!1.16e-18!124 | |ontology_enrichment_celltype=CL:0000766!8.21e-27!76;CL:0002194!2.27e-24!63;CL:0000576!2.27e-24!63;CL:0000040!2.27e-24!63;CL:0000559!2.27e-24!63;CL:0000738!4.40e-23!140;CL:0002057!9.14e-23!42;CL:0000557!1.14e-22!71;CL:0002009!1.24e-22!65;CL:0000839!3.72e-22!70;CL:0000037!6.49e-22!172;CL:0000566!6.49e-22!172;CL:0000988!3.18e-21!182;CL:0000860!4.12e-21!45;CL:0002087!5.56e-21!119;CL:0000763!7.78e-21!112;CL:0000049!7.78e-21!112;CL:0002032!3.12e-20!165;CL:0000837!3.12e-20!165;CL:0002031!1.16e-18!124 | ||
|ontology_enrichment_celltype_v019=CL:0000473;2.25e-25;39!CL:0000234;2.25e-25;39!CL:0000860;3.42e-23;33!CL:0002057;3.42e-23;33!CL:0000576;2.39e-22;48!CL:0000766;5.87e-18;69!CL:0002393;2.62e-12;6!CL:0002397;2.62e-12;6!CL:0000763;7.83e-12;100!CL:0000094;1.90e-09;8!CL:0000235;3.92e-08;6!CL:0000738;5.10e-08;136!CL:0000775;1.53e-07;3!CL:0000784;2.53e-07;3!CL:0002087;9.51e-07;104 | |ontology_enrichment_celltype_v019=CL:0000473;2.25e-25;39!CL:0000234;2.25e-25;39!CL:0000860;3.42e-23;33!CL:0002057;3.42e-23;33!CL:0000576;2.39e-22;48!CL:0000766;5.87e-18;69!CL:0002393;2.62e-12;6!CL:0002397;2.62e-12;6!CL:0000763;7.83e-12;100!CL:0000094;1.90e-09;8!CL:0000235;3.92e-08;6!CL:0000738;5.10e-08;136!CL:0000775;1.53e-07;3!CL:0000784;2.53e-07;3!CL:0002087;9.51e-07;104 | ||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.98e-48,72;CL:0002194,1.04e-44,59;CL:0000576,1.04e-44,59;CL:0000040,1.04e-44,59;CL:0000559,1.04e-44,59;CL:0002009,7.44e-43,61;CL:0000473,1.21e-41,48;CL:0000234,1.21e-41,48;CL:0000557,5.06e-40,67;CL:0000839,1.04e-38,66;CL:0000860,5.10e-35,42;CL:0002057,5.10e-35,42;CL:0000763,1.24e-33,108;CL:0000049,1.24e-33,108;CL:0000738,8.79e-28,136;CL:0000037,9.66e-24,168;CL:0002087,4.85e-23,115;CL:0000988,1.08e-22,177;CL:0002032,6.78e-21,161;CL:0000837,6.78e-21,161;CL:0002031,2.60e-19,120;CL:0002393,9.62e-11,9;CL:0002397,9.62e-11,9;CL:0000094,1.94e-09,8;CL:0000235,4.98e-08,6;CL:0000775,1.34e-07,3;CL:0000784,2.69e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;4.49e-25;42!CL:0000049;2.42e-11;108 | |ontology_enrichment_development_v019=CL:0002057;4.49e-25;42!CL:0000049;2.42e-11;108 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.42e-26!102;UBERON:0003061!2.42e-26!102;UBERON:0002193!1.77e-24!112;UBERON:0002371!2.38e-18!80;UBERON:0001474!1.11e-15!86;UBERON:0003081!1.72e-15!216;UBERON:0002405!6.46e-15!115;UBERON:0007023!2.00e-14!115;UBERON:0004765!9.64e-11!101;UBERON:0001434!9.64e-11!101;UBERON:0000178!1.40e-07!15;UBERON:0000179!1.40e-07!15;UBERON:0000463!1.40e-07!15 | |ontology_enrichment_uberon=UBERON:0002390!2.42e-26!102;UBERON:0003061!2.42e-26!102;UBERON:0002193!1.77e-24!112;UBERON:0002371!2.38e-18!80;UBERON:0001474!1.11e-15!86;UBERON:0003081!1.72e-15!216;UBERON:0002405!6.46e-15!115;UBERON:0007023!2.00e-14!115;UBERON:0004765!9.64e-11!101;UBERON:0001434!9.64e-11!101;UBERON:0000178!1.40e-07!15;UBERON:0000179!1.40e-07!15;UBERON:0000463!1.40e-07!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.43e-15;15!UBERON:0000179;3.43e-15;15!UBERON:0000463;3.43e-15;15!UBERON:0002390;6.68e-09;32 | |ontology_enrichment_uberon_v019=UBERON:0000178;3.43e-15;15!UBERON:0000179;3.43e-15;15!UBERON:0000463;3.43e-15;15!UBERON:0002390;6.68e-09;32 | ||
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| ||
|short_description=p4@IFNAR2 | |short_description=p4@IFNAR2 | ||
}} | }} |
Latest revision as of 03:57, 18 September 2015
Short description: | p4@IFNAR2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_IFNAR2_5end |
Coexpression cluster: | C344_Neutrophils_CD14_Eosinophils_Whole_blood_CD14CD16_gall |
Association with transcript: | -8bp_to_ENST00000447980_5end |
EntrezGene: | IFNAR2 |
HGNC: | 5433 |
UniProt: | C9JM33 |
Genome view: | ZENBU |
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CAGE Expression
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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 1.98e-48 | 72 |
monopoietic cell | 1.04e-44 | 59 |
monocyte | 1.04e-44 | 59 |
monoblast | 1.04e-44 | 59 |
promonocyte | 1.04e-44 | 59 |
macrophage dendritic cell progenitor | 7.44e-43 | 61 |
defensive cell | 1.21e-41 | 48 |
phagocyte | 1.21e-41 | 48 |
granulocyte monocyte progenitor cell | 5.06e-40 | 67 |
myeloid lineage restricted progenitor cell | 1.04e-38 | 66 |
classical monocyte | 5.10e-35 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.10e-35 | 42 |
myeloid cell | 1.24e-33 | 108 |
common myeloid progenitor | 1.24e-33 | 108 |
leukocyte | 8.79e-28 | 136 |
hematopoietic stem cell | 9.66e-24 | 168 |
nongranular leukocyte | 4.85e-23 | 115 |
hematopoietic cell | 1.08e-22 | 177 |
hematopoietic oligopotent progenitor cell | 6.78e-21 | 161 |
hematopoietic multipotent progenitor cell | 6.78e-21 | 161 |
hematopoietic lineage restricted progenitor cell | 2.60e-19 | 120 |
intermediate monocyte | 9.62e-11 | 9 |
CD14-positive, CD16-positive monocyte | 9.62e-11 | 9 |
granulocyte | 1.94e-09 | 8 |
macrophage | 4.98e-08 | 6 |
neutrophil | 1.34e-07 | 3 |
plasmacytoid dendritic cell | 2.69e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.01e-46 | 98 |
blood island | 1.01e-46 | 98 |
hemolymphoid system | 8.77e-43 | 108 |
bone marrow | 7.67e-34 | 76 |
bone element | 1.77e-30 | 82 |
immune system | 4.89e-30 | 93 |
skeletal element | 1.07e-26 | 90 |
skeletal system | 7.78e-23 | 100 |
lateral plate mesoderm | 1.58e-20 | 203 |
blood | 4.76e-15 | 15 |
haemolymphatic fluid | 4.76e-15 | 15 |
organism substance | 4.76e-15 | 15 |
musculoskeletal system | 7.33e-10 | 167 |
mesoderm | 2.67e-09 | 315 |
mesoderm-derived structure | 2.67e-09 | 315 |
presumptive mesoderm | 2.67e-09 | 315 |