FFCP PHASE1:Hg19::chr20:35201993..35202050,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr20:35201993..35202050,+
|short_description=p1@TGIF2
|description=CAGE_peak_1_at_TGIF2_5end
|association_with_transcript=0bp_to_ENST00000373872,NM_021809,uc00...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=60436 | |EntrezGene=60436 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15764 | |HGNC=15764 | ||
|TSSclassifier=strong | |||
|UniProt=Q9GZN2 | |UniProt=Q9GZN2 | ||
|association_with_transcript=0bp_to_ENST00000373872,NM_021809,uc002xfn.2_5end | |||
|cluster_id=chr20:35201993..35202050,+ | |||
|description=CAGE_peak_1_at_TGIF2_5end | |||
|id=chr20:35201993..35202050,+ | |||
|ontology_enrichment_celltype=CL:0000988!1.13e-37!182;CL:0000037!2.73e-36!172;CL:0000566!2.73e-36!172;CL:0002032!4.35e-33!165;CL:0000837!4.35e-33!165;CL:0000738!1.10e-30!140;CL:0002087!6.93e-23!119;CL:0002031!2.88e-22!124;CL:0000542!3.88e-19!53;CL:0000051!3.88e-19!53;CL:0000838!1.14e-18!52;CL:0000763!9.96e-15!112;CL:0000049!9.96e-15!112;CL:0002057!5.00e-12!42;CL:0000945!6.23e-12!24;CL:0000826!6.23e-12!24;CL:0000860!3.39e-10!45;CL:0000766!6.91e-09!76;CL:0000236!1.99e-08!14;CL:0000557!4.36e-08!71;CL:0000084!8.16e-08!25;CL:0000827!8.16e-08!25 | |||
|ontology_enrichment_celltype_v019=CL:0000945;5.24e-12;24!CL:0000542;1.77e-11;53!CL:0000860;1.27e-10;33!CL:0002057;1.27e-10;33!CL:0002087;9.57e-10;104!CL:0000084;6.76e-08;25!CL:0000236;7.13e-08;13!CL:0000738;1.10e-07;136!CL:0000988;2.33e-07;177!CL:0000576;3.23e-07;48!CL:0000473;6.31e-07;39!CL:0000234;6.31e-07;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,5.69e-40,177;CL:0000037,1.13e-38,168;CL:0002032,2.16e-35,161;CL:0000837,2.16e-35,161;CL:0000738,3.93e-33,136;CL:0002087,3.99e-25,115;CL:0002031,2.09e-24,120;CL:0000542,3.86e-19,53;CL:0000051,3.86e-19,53;CL:0000838,1.14e-18,52;CL:0000763,1.86e-16,108;CL:0000049,1.86e-16,108;CL:0000860,4.98e-12,42;CL:0002057,4.98e-12,42;CL:0000945,6.21e-12,24;CL:0000826,6.21e-12,24;CL:0000766,1.86e-10,72;CL:0000557,1.27e-09,67;CL:0000473,1.94e-09,48;CL:0000234,1.94e-09,48;CL:0000236,1.99e-08,14;CL:0002009,4.40e-08,61;CL:0000084,8.14e-08,25;CL:0000827,8.14e-08,25;CL:0002194,3.00e-07,59;CL:0000576,3.00e-07,59;CL:0000040,3.00e-07,59;CL:0000559,3.00e-07,59;CL:0000839,3.45e-07,66 | |||
|ontology_enrichment_development_v019=CL:0000051;1.77e-11;53!CL:0002057;3.24e-09;42 | |||
|ontology_enrichment_disease=DOID:2531!5.10e-10!51;DOID:0060083!5.10e-10!51;DOID:1240!6.34e-08!39 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:2531,5.08e-10,51;DOID:0060083,5.08e-10,51;DOID:1240,6.32e-08,39 | |||
|ontology_enrichment_uberon=UBERON:0002193!1.34e-11!112;UBERON:0002390!5.90e-11!102;UBERON:0003061!5.90e-11!102;UBERON:0002405!2.05e-10!115;UBERON:0002371!9.17e-07!80 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,4.54e-13,108;UBERON:0002390,1.86e-12,98;UBERON:0003061,1.86e-12,98;UBERON:0002405,2.08e-10,93;UBERON:0002371,5.17e-08,76;UBERON:0001474,1.26e-07,82 | |||
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| ||
|short_description=p1@TGIF2 | |||
}} | }} |
Latest revision as of 23:25, 15 September 2015
Short description: | p1@TGIF2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TGIF2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000373872, NM_021809, uc002xfn.2_5end |
EntrezGene: | TGIF2 |
HGNC: | 15764 |
UniProt: | Q9GZN2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 5.69e-40 | 177 |
hematopoietic stem cell | 1.13e-38 | 168 |
hematopoietic oligopotent progenitor cell | 2.16e-35 | 161 |
hematopoietic multipotent progenitor cell | 2.16e-35 | 161 |
leukocyte | 3.93e-33 | 136 |
nongranular leukocyte | 3.99e-25 | 115 |
hematopoietic lineage restricted progenitor cell | 2.09e-24 | 120 |
lymphocyte | 3.86e-19 | 53 |
common lymphoid progenitor | 3.86e-19 | 53 |
lymphoid lineage restricted progenitor cell | 1.14e-18 | 52 |
myeloid cell | 1.86e-16 | 108 |
common myeloid progenitor | 1.86e-16 | 108 |
classical monocyte | 4.98e-12 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.98e-12 | 42 |
lymphocyte of B lineage | 6.21e-12 | 24 |
pro-B cell | 6.21e-12 | 24 |
myeloid leukocyte | 1.86e-10 | 72 |
granulocyte monocyte progenitor cell | 1.27e-09 | 67 |
defensive cell | 1.94e-09 | 48 |
phagocyte | 1.94e-09 | 48 |
B cell | 1.99e-08 | 14 |
macrophage dendritic cell progenitor | 4.40e-08 | 61 |
T cell | 8.14e-08 | 25 |
pro-T cell | 8.14e-08 | 25 |
monopoietic cell | 3.00e-07 | 59 |
monocyte | 3.00e-07 | 59 |
monoblast | 3.00e-07 | 59 |
promonocyte | 3.00e-07 | 59 |
myeloid lineage restricted progenitor cell | 3.45e-07 | 66 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 4.54e-13 | 108 |
hematopoietic system | 1.86e-12 | 98 |
blood island | 1.86e-12 | 98 |
immune system | 2.08e-10 | 93 |
bone marrow | 5.17e-08 | 76 |
bone element | 1.26e-07 | 82 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 5.08e-10 | 51 |
immune system cancer | 5.08e-10 | 51 |
leukemia | 6.32e-08 | 39 |