FFCP PHASE1:Hg19::chr4:154605474..154605492,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7097 | |EntrezGene=7097 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=11848 | |HGNC=11848 | ||
|TSSclassifier=strong | |||
|UniProt=B3KWR9,D1CS45,O60603 | |UniProt=B3KWR9,D1CS45,O60603 | ||
|association_with_transcript=33bp_to_NM_003264,uc003inn.1,uc003ino.1,uc003inp.1,uc003inq.2,uc003inr.2_5end | |association_with_transcript=33bp_to_NM_003264,uc003inn.1,uc003ino.1,uc003inp.1,uc003inq.2,uc003inr.2_5end | ||
|cluster_id=chr4:154605474..154605492,+ | |||
|coexpression_cluster_id=C2 | |coexpression_cluster_id=C2 | ||
|description=CAGE_peak_2_at_TLR2_5end | |description=CAGE_peak_2_at_TLR2_5end | ||
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|ontology_enrichment_celltype=CL:0000766!1.24e-51!76;CL:0002057!1.38e-49!42;CL:0002194!3.91e-47!63;CL:0000576!3.91e-47!63;CL:0000040!3.91e-47!63;CL:0000559!3.91e-47!63;CL:0002009!8.29e-47!65;CL:0000860!4.16e-45!45;CL:0000557!4.07e-41!71;CL:0000839!2.13e-40!70;CL:0000738!6.62e-32!140;CL:0000763!7.11e-30!112;CL:0000049!7.11e-30!112;CL:0002087!5.37e-28!119;CL:0002031!1.70e-23!124;CL:0000037!5.10e-22!172;CL:0000566!5.10e-22!172;CL:0002032!3.23e-20!165;CL:0000837!3.23e-20!165;CL:0000988!1.85e-19!182;CL:0000094!4.76e-11!8;CL:0002393!2.63e-10!9;CL:0002397!2.63e-10!9;CL:0000081!2.10e-07!11 | |ontology_enrichment_celltype=CL:0000766!1.24e-51!76;CL:0002057!1.38e-49!42;CL:0002194!3.91e-47!63;CL:0000576!3.91e-47!63;CL:0000040!3.91e-47!63;CL:0000559!3.91e-47!63;CL:0002009!8.29e-47!65;CL:0000860!4.16e-45!45;CL:0000557!4.07e-41!71;CL:0000839!2.13e-40!70;CL:0000738!6.62e-32!140;CL:0000763!7.11e-30!112;CL:0000049!7.11e-30!112;CL:0002087!5.37e-28!119;CL:0002031!1.70e-23!124;CL:0000037!5.10e-22!172;CL:0000566!5.10e-22!172;CL:0002032!3.23e-20!165;CL:0000837!3.23e-20!165;CL:0000988!1.85e-19!182;CL:0000094!4.76e-11!8;CL:0002393!2.63e-10!9;CL:0002397!2.63e-10!9;CL:0000081!2.10e-07!11 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.66e-86;33!CL:0002057;1.66e-86;33!CL:0000473;1.40e-63;39!CL:0000234;1.40e-63;39!CL:0000576;3.87e-52;48!CL:0000766;9.07e-38;69!CL:0000094;3.65e-24;8!CL:0000763;2.66e-17;100!CL:0000081;3.62e-17;11!CL:0002087;3.05e-13;104!CL:0002393;2.05e-12;6!CL:0002397;2.05e-12;6!CL:0000738;1.06e-11;136!CL:0000775;5.28e-11;3!CL:0000226;3.86e-09;3!CL:0000842;3.86e-09;3!CL:0000767;1.04e-08;3!CL:0000771;5.68e-08;2!CL:0000988;2.45e-07;177 | |ontology_enrichment_celltype_v019=CL:0000860;1.66e-86;33!CL:0002057;1.66e-86;33!CL:0000473;1.40e-63;39!CL:0000234;1.40e-63;39!CL:0000576;3.87e-52;48!CL:0000766;9.07e-38;69!CL:0000094;3.65e-24;8!CL:0000763;2.66e-17;100!CL:0000081;3.62e-17;11!CL:0002087;3.05e-13;104!CL:0002393;2.05e-12;6!CL:0002397;2.05e-12;6!CL:0000738;1.06e-11;136!CL:0000775;5.28e-11;3!CL:0000226;3.86e-09;3!CL:0000842;3.86e-09;3!CL:0000767;1.04e-08;3!CL:0000771;5.68e-08;2!CL:0000988;2.45e-07;177 | ||
|ontology_enrichment_celltype_v019_2=CL:0000860,6.58e-98,42;CL:0002057,6.58e-98,42;CL:0000473,8.77e-89,48;CL:0000234,8.77e-89,48;CL:0000766,6.79e-87,72;CL:0002194,1.48e-72,59;CL:0000576,1.48e-72,59;CL:0000040,1.48e-72,59;CL:0000559,1.48e-72,59;CL:0002009,7.23e-70,61;CL:0000839,7.55e-64,66;CL:0000557,9.44e-63,67;CL:0000763,3.68e-54,108;CL:0000049,3.68e-54,108;CL:0000738,1.12e-48,136;CL:0002087,3.76e-38,115;CL:0000037,4.78e-37,168;CL:0000988,1.57e-34,177;CL:0002032,1.83e-32,161;CL:0000837,1.83e-32,161;CL:0002031,1.36e-30,120;CL:0000094,2.99e-24,8;CL:0000081,3.14e-17,11;CL:0000134,8.74e-12,354;CL:0002320,2.57e-11,361;CL:0000775,5.28e-11,3;CL:0000219,1.12e-09,386;CL:0000226,4.87e-09,3;CL:0000842,4.87e-09,3;CL:0000767,8.62e-09,3;CL:0002393,4.01e-08,9;CL:0002397,4.01e-08,9;CL:0000771,5.68e-08,2;CL:0000048,1.08e-07,427;CL:0000034,1.26e-07,441;CL:0000723,2.02e-07,433 | |||
|ontology_enrichment_development_v019=CL:0002057;4.95e-71;42!CL:0000049;9.37e-17;108 | |ontology_enrichment_development_v019=CL:0002057;4.95e-71;42!CL:0000049;9.37e-17;108 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!5.33e-46!112;UBERON:0002390!4.03e-45!102;UBERON:0003061!4.03e-45!102;UBERON:0002371!3.25e-34!80;UBERON:0001474!1.93e-30!86;UBERON:0002405!6.28e-28!115;UBERON:0004765!3.99e-25!101;UBERON:0001434!3.99e-25!101;UBERON:0003081!8.42e-13!216;UBERON:0000178!5.32e-11!15;UBERON:0000179!5.32e-11!15;UBERON:0000463!5.32e-11!15;UBERON:0002204!3.38e-09!167;UBERON:0007023!1.83e-07!115 | |ontology_enrichment_uberon=UBERON:0002193!5.33e-46!112;UBERON:0002390!4.03e-45!102;UBERON:0003061!4.03e-45!102;UBERON:0002371!3.25e-34!80;UBERON:0001474!1.93e-30!86;UBERON:0002405!6.28e-28!115;UBERON:0004765!3.99e-25!101;UBERON:0001434!3.99e-25!101;UBERON:0003081!8.42e-13!216;UBERON:0000178!5.32e-11!15;UBERON:0000179!5.32e-11!15;UBERON:0000463!5.32e-11!15;UBERON:0002204!3.38e-09!167;UBERON:0007023!1.83e-07!115 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;4.94e-26;15!UBERON:0000179;4.94e-26;15!UBERON:0000463;4.94e-26;15!UBERON:0002390;2.64e-10;32!UBERON:0002193;6.12e-07;42 | |ontology_enrichment_uberon_v019=UBERON:0000178;4.94e-26;15!UBERON:0000179;4.94e-26;15!UBERON:0000463;4.94e-26;15!UBERON:0002390;2.64e-10;32!UBERON:0002193;6.12e-07;42 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,7.21e-72,98;UBERON:0003061,7.21e-72,98;UBERON:0002193,7.23e-67,108;UBERON:0002371,3.69e-54,76;UBERON:0001474,1.81e-49,82;UBERON:0002405,8.13e-45,93;UBERON:0004765,3.52e-44,90;UBERON:0001434,9.48e-39,100;UBERON:0003081,2.48e-28,203;UBERON:0000178,5.82e-26,15;UBERON:0000179,5.82e-26,15;UBERON:0000463,5.82e-26,15;UBERON:0002204,3.96e-19,167;UBERON:0000926,7.46e-14,315;UBERON:0004120,7.46e-14,315;UBERON:0006603,7.46e-14,315;UBERON:0002384,1.11e-10,371 | |||
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| ||
|short_description=p2@TLR2 | |short_description=p2@TLR2 | ||
}} | }} |
Latest revision as of 05:23, 16 September 2015
Short description: | p2@TLR2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TLR2_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 33bp_to_NM_003264, uc003inn.1, uc003ino.1, uc003inp.1, uc003inq.2, uc003inr.2_5end |
EntrezGene: | TLR2 |
HGNC: | 11848 |
UniProt: | B3KWR9D1CS45O60603 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 7.21e-72 | 98 |
blood island | 7.21e-72 | 98 |
hemolymphoid system | 7.23e-67 | 108 |
bone marrow | 3.69e-54 | 76 |
bone element | 1.81e-49 | 82 |
immune system | 8.13e-45 | 93 |
skeletal element | 3.52e-44 | 90 |
skeletal system | 9.48e-39 | 100 |
lateral plate mesoderm | 2.48e-28 | 203 |
blood | 5.82e-26 | 15 |
haemolymphatic fluid | 5.82e-26 | 15 |
organism substance | 5.82e-26 | 15 |
musculoskeletal system | 3.96e-19 | 167 |
mesoderm | 7.46e-14 | 315 |
mesoderm-derived structure | 7.46e-14 | 315 |
presumptive mesoderm | 7.46e-14 | 315 |
connective tissue | 1.11e-10 | 371 |