FFCP PHASE1:Hg19::chr20:57485048..57485073,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr20:57485048..57485073,+
|short_description=p28@GNAS
|description=CAGE_peak_28_at_GNAS_5end
|association_with_transcript=0bp_to_ENST00000475610_5end
|EntrezG...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2778 | |EntrezGene=2778 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4392 | |HGNC=4392 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000475610_5end | |||
|cluster_id=chr20:57485048..57485073,+ | |||
|description=CAGE_peak_28_at_GNAS_5end | |||
|id=chr20:57485048..57485073,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000632;1.15e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000632,8.09e-08,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!5.24e-10!57;UBERON:0005068!5.24e-10!57;UBERON:0006241!5.24e-10!57;UBERON:0007135!5.24e-10!57;UBERON:0002616!1.23e-08!59;UBERON:0007023!1.42e-08!115;UBERON:0000956!2.75e-08!25;UBERON:0000203!2.75e-08!25;UBERON:0002619!3.13e-08!22;UBERON:0003075!6.17e-08!86;UBERON:0007284!6.17e-08!86;UBERON:0000481!7.73e-08!347;UBERON:0000477!1.05e-07!286;UBERON:0001017!1.08e-07!82;UBERON:0002780!1.28e-07!41;UBERON:0001890!1.28e-07!41;UBERON:0006240!1.28e-07!41;UBERON:0002346!1.31e-07!90;UBERON:0001950!2.51e-07!20;UBERON:0000955!2.90e-07!69;UBERON:0006238!2.90e-07!69;UBERON:0003080!4.70e-07!42;UBERON:0005743!5.77e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;3.32e-12;22!UBERON:0001950;1.87e-11;20!UBERON:0000956;1.83e-10;25!UBERON:0000203;1.83e-10;25!UBERON:0001872;1.28e-07;5!UBERON:0003528;2.04e-07;34!UBERON:0002020;2.04e-07;34!UBERON:0002791;8.87e-07;32!UBERON:0001869;9.54e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002619,2.26e-12,22;UBERON:0001950,1.55e-11,20;UBERON:0000956,1.31e-10,25;UBERON:0000203,1.31e-10,25;UBERON:0002780,2.63e-09,41;UBERON:0001890,2.63e-09,41;UBERON:0003080,2.63e-09,41;UBERON:0006240,2.63e-09,41;UBERON:0001049,4.44e-09,56;UBERON:0005068,4.44e-09,56;UBERON:0006241,4.44e-09,56;UBERON:0007135,4.44e-09,56;UBERON:0003528,1.38e-08,34;UBERON:0002020,1.38e-08,34;UBERON:0000073,1.42e-08,53;UBERON:0002616,1.42e-08,53;UBERON:0001017,4.37e-08,81;UBERON:0002791,9.11e-08,32;UBERON:0001869,9.11e-08,32;UBERON:0001872,9.44e-08,5;UBERON:0001016,1.37e-07,89;UBERON:0000955,1.96e-07,68;UBERON:0006238,1.96e-07,68;UBERON:0003075,3.11e-07,82;UBERON:0007284,3.11e-07,82;UBERON:0007023,3.37e-07,114;UBERON:0001893,3.60e-07,34;UBERON:0003056,6.89e-07,61 | |||
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| ||
|short_description=p28@GNAS | |||
}} | }} |
Latest revision as of 06:39, 17 September 2015
Short description: | p28@GNAS |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_28_at_GNAS_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000475610_5end |
EntrezGene: | GNAS |
HGNC: | 4392 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatic stellate cell | 8.09e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
regional part of cerebral cortex | 2.26e-12 | 22 |
neocortex | 1.55e-11 | 20 |
cerebral cortex | 1.31e-10 | 25 |
pallium | 1.31e-10 | 25 |
regional part of forebrain | 2.63e-09 | 41 |
forebrain | 2.63e-09 | 41 |
anterior neural tube | 2.63e-09 | 41 |
future forebrain | 2.63e-09 | 41 |
neural tube | 4.44e-09 | 56 |
neural rod | 4.44e-09 | 56 |
future spinal cord | 4.44e-09 | 56 |
neural keel | 4.44e-09 | 56 |
brain grey matter | 1.38e-08 | 34 |
gray matter | 1.38e-08 | 34 |
regional part of nervous system | 1.42e-08 | 53 |
regional part of brain | 1.42e-08 | 53 |
central nervous system | 4.37e-08 | 81 |
regional part of telencephalon | 9.11e-08 | 32 |
cerebral hemisphere | 9.11e-08 | 32 |
parietal lobe | 9.44e-08 | 5 |
nervous system | 1.37e-07 | 89 |
brain | 1.96e-07 | 68 |
future brain | 1.96e-07 | 68 |
neural plate | 3.11e-07 | 82 |
presumptive neural plate | 3.11e-07 | 82 |
adult organism | 3.37e-07 | 114 |
telencephalon | 3.60e-07 | 34 |
pre-chordal neural plate | 6.89e-07 | 61 |