FFCP PHASE1:Hg19::chr9:116263811..116263822,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5998 | |EntrezGene=5998 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9999 | |HGNC=9999 | ||
|TSSclassifier=strong | |||
|UniProt=B3KUB2 | |UniProt=B3KUB2 | ||
|association_with_transcript=24bp_to_ENST00000394646_5end | |association_with_transcript=24bp_to_ENST00000394646_5end | ||
|cluster_id=chr9:116263811..116263822,+ | |||
|coexpression_cluster_id=C140 | |coexpression_cluster_id=C140 | ||
|description=CAGE_peak_14_at_RGS3_5end | |description=CAGE_peak_14_at_RGS3_5end | ||
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|ontology_enrichment_celltype=CL:0002139!2.87e-37!24;CL:0000115!4.84e-35!35;CL:0000071!2.60e-28!18;CL:0002546!2.60e-28!18;CL:0002078!1.27e-25!44;CL:0000213!2.11e-17!57;CL:0000215!2.11e-17!57;CL:1000413!5.63e-15!9;CL:0002543!1.27e-10!6;CL:0002544!1.51e-10!6;CL:0005020!1.82e-10!6;CL:0002138!1.82e-10!6;CL:0005022!1.82e-10!6 | |ontology_enrichment_celltype=CL:0002139!2.87e-37!24;CL:0000115!4.84e-35!35;CL:0000071!2.60e-28!18;CL:0002546!2.60e-28!18;CL:0002078!1.27e-25!44;CL:0000213!2.11e-17!57;CL:0000215!2.11e-17!57;CL:1000413!5.63e-15!9;CL:0002543!1.27e-10!6;CL:0002544!1.51e-10!6;CL:0005020!1.82e-10!6;CL:0002138!1.82e-10!6;CL:0005022!1.82e-10!6 | ||
|ontology_enrichment_celltype_v019=CL:0002139;4.91e-87;24!CL:0000115;1.54e-74;36!CL:0000071;1.64e-65;18!CL:0002078;4.09e-44;45!CL:1000413;1.49e-33;9!CL:0000213;2.06e-31;58!CL:0000215;2.06e-31;58!CL:0002543;4.62e-23;6!CL:0002544;6.01e-23;6!CL:0002138;1.05e-22;6!CL:0002618;2.91e-12;3!CL:0002188;4.14e-12;5!CL:0002144;4.92e-12;3!CL:0000076;7.07e-10;63!CL:0002545;7.57e-09;2!CL:0002262;1.15e-08;2!CL:1000398;1.15e-08;2!CL:1000746;1.17e-08;7!CL:1000612;1.17e-08;7 | |ontology_enrichment_celltype_v019=CL:0002139;4.91e-87;24!CL:0000115;1.54e-74;36!CL:0000071;1.64e-65;18!CL:0002078;4.09e-44;45!CL:1000413;1.49e-33;9!CL:0000213;2.06e-31;58!CL:0000215;2.06e-31;58!CL:0002543;4.62e-23;6!CL:0002544;6.01e-23;6!CL:0002138;1.05e-22;6!CL:0002618;2.91e-12;3!CL:0002188;4.14e-12;5!CL:0002144;4.92e-12;3!CL:0000076;7.07e-10;63!CL:0002545;7.57e-09;2!CL:0002262;1.15e-08;2!CL:1000398;1.15e-08;2!CL:1000746;1.17e-08;7!CL:1000612;1.17e-08;7 | ||
|ontology_enrichment_celltype_v019_2=CL:0000115,9.53e-89,36;CL:0002139,5.68e-87,24;CL:0002078,2.04e-69,45;CL:0000071,1.92e-65,18;CL:0002546,1.92e-65,18;CL:0000213,4.36e-52,58;CL:0000215,4.36e-52,58;CL:1000413,1.80e-33,9;CL:0002543,4.38e-23,6;CL:0002544,6.62e-23,6;CL:0005020,1.04e-22,6;CL:0002138,1.04e-22,6;CL:0005022,1.04e-22,6;CL:0000222,6.49e-21,121;CL:0000076,2.39e-15,63;CL:0002618,2.76e-12,3;CL:0002188,4.66e-12,5;CL:0002144,5.02e-12,3;CL:0002545,8.18e-09,2;CL:0002262,1.07e-08,2;CL:1000398,1.07e-08,2;CL:1000746,1.27e-08,7;CL:1000612,1.27e-08,7 | |||
|ontology_enrichment_development_v019=CL:0002546;1.64e-65;18!CL:0005022;1.05e-22;6!CL:0000222;1.88e-09;121 | |ontology_enrichment_development_v019=CL:0002546;1.64e-65;18!CL:0005022;1.05e-22;6!CL:0000222;1.88e-09;121 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.64e-58!115;UBERON:0001986!2.60e-28!18;UBERON:0004638!2.60e-28!18;UBERON:0004852!2.60e-28!18;UBERON:0004111!3.63e-27!241;UBERON:0000477!1.02e-24!286;UBERON:0000025!1.77e-24!194;UBERON:0000487!5.93e-22!22;UBERON:0001049!9.00e-21!57;UBERON:0005068!9.00e-21!57;UBERON:0006241!9.00e-21!57;UBERON:0007135!9.00e-21!57;UBERON:0006914!1.53e-18!25;UBERON:0002616!4.05e-17!59;UBERON:0003075!5.11e-17!86;UBERON:0007284!5.11e-17!86;UBERON:0000055!1.57e-16!69;UBERON:0001017!7.87e-16!82;UBERON:0002346!1.02e-15!90;UBERON:0005743!1.13e-15!86;UBERON:0000955!4.06e-15!69;UBERON:0006238!4.06e-15!69;UBERON:0003915!5.63e-15!9;UBERON:0004700!5.63e-15!9;UBERON:0001917!5.63e-15!9;UBERON:0000483!9.02e-15!309;UBERON:0000119!2.14e-14!312;UBERON:0003080!2.56e-14!42;UBERON:0002780!2.87e-13!41;UBERON:0001890!2.87e-13!41;UBERON:0006240!2.87e-13!41;UBERON:0000073!4.13e-13!94;UBERON:0001016!4.13e-13!94;UBERON:0002049!4.31e-13!79;UBERON:0007798!4.31e-13!79;UBERON:0004872!8.98e-13!84;UBERON:0001009!2.98e-12!113;UBERON:0002465!7.12e-12!10;UBERON:0001981!4.56e-11!60;UBERON:0007500!4.56e-11!60;UBERON:0004537!4.56e-11!60;UBERON:0006965!4.56e-11!60;UBERON:0004535!1.36e-10!110;UBERON:0001893!2.16e-10!34;UBERON:0002020!3.46e-10!34;UBERON:0003528!3.46e-10!34;UBERON:0001473!5.82e-10!8;UBERON:0004536!5.82e-10!8;UBERON:0006558!5.82e-10!8;UBERON:0000467!9.10e-10!625;UBERON:0002298!1.04e-09!8;UBERON:0000480!1.07e-09!626;UBERON:0002791!1.28e-09!33;UBERON:0000468!1.29e-09!659;UBERON:0001869!6.84e-09!32;UBERON:0003914!7.40e-09!118;UBERON:0000153!7.41e-09!129;UBERON:0007811!7.41e-09!129;UBERON:0003056!1.12e-08!61;UBERON:0001638!1.20e-08!9;UBERON:0003920!1.20e-08!9;UBERON:0004582!1.20e-08!9;UBERON:0003076!8.06e-08!15;UBERON:0003057!8.06e-08!15;UBERON:0000064!1.11e-07!219;UBERON:0000033!1.75e-07!123;UBERON:0003103!4.97e-07!69;UBERON:0004121!5.84e-07!169;UBERON:0004733!9.51e-07!12;UBERON:0002028!9.51e-07!12;UBERON:0007277!9.51e-07!12 | |ontology_enrichment_uberon=UBERON:0007023!1.64e-58!115;UBERON:0001986!2.60e-28!18;UBERON:0004638!2.60e-28!18;UBERON:0004852!2.60e-28!18;UBERON:0004111!3.63e-27!241;UBERON:0000477!1.02e-24!286;UBERON:0000025!1.77e-24!194;UBERON:0000487!5.93e-22!22;UBERON:0001049!9.00e-21!57;UBERON:0005068!9.00e-21!57;UBERON:0006241!9.00e-21!57;UBERON:0007135!9.00e-21!57;UBERON:0006914!1.53e-18!25;UBERON:0002616!4.05e-17!59;UBERON:0003075!5.11e-17!86;UBERON:0007284!5.11e-17!86;UBERON:0000055!1.57e-16!69;UBERON:0001017!7.87e-16!82;UBERON:0002346!1.02e-15!90;UBERON:0005743!1.13e-15!86;UBERON:0000955!4.06e-15!69;UBERON:0006238!4.06e-15!69;UBERON:0003915!5.63e-15!9;UBERON:0004700!5.63e-15!9;UBERON:0001917!5.63e-15!9;UBERON:0000483!9.02e-15!309;UBERON:0000119!2.14e-14!312;UBERON:0003080!2.56e-14!42;UBERON:0002780!2.87e-13!41;UBERON:0001890!2.87e-13!41;UBERON:0006240!2.87e-13!41;UBERON:0000073!4.13e-13!94;UBERON:0001016!4.13e-13!94;UBERON:0002049!4.31e-13!79;UBERON:0007798!4.31e-13!79;UBERON:0004872!8.98e-13!84;UBERON:0001009!2.98e-12!113;UBERON:0002465!7.12e-12!10;UBERON:0001981!4.56e-11!60;UBERON:0007500!4.56e-11!60;UBERON:0004537!4.56e-11!60;UBERON:0006965!4.56e-11!60;UBERON:0004535!1.36e-10!110;UBERON:0001893!2.16e-10!34;UBERON:0002020!3.46e-10!34;UBERON:0003528!3.46e-10!34;UBERON:0001473!5.82e-10!8;UBERON:0004536!5.82e-10!8;UBERON:0006558!5.82e-10!8;UBERON:0000467!9.10e-10!625;UBERON:0002298!1.04e-09!8;UBERON:0000480!1.07e-09!626;UBERON:0002791!1.28e-09!33;UBERON:0000468!1.29e-09!659;UBERON:0001869!6.84e-09!32;UBERON:0003914!7.40e-09!118;UBERON:0000153!7.41e-09!129;UBERON:0007811!7.41e-09!129;UBERON:0003056!1.12e-08!61;UBERON:0001638!1.20e-08!9;UBERON:0003920!1.20e-08!9;UBERON:0004582!1.20e-08!9;UBERON:0003076!8.06e-08!15;UBERON:0003057!8.06e-08!15;UBERON:0000064!1.11e-07!219;UBERON:0000033!1.75e-07!123;UBERON:0003103!4.97e-07!69;UBERON:0004121!5.84e-07!169;UBERON:0004733!9.51e-07!12;UBERON:0002028!9.51e-07!12;UBERON:0007277!9.51e-07!12 | ||
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|short_description=p14@RGS3 | |short_description=p14@RGS3 | ||
}} | }} |
Latest revision as of 07:06, 20 September 2015
Short description: | p14@RGS3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_14_at_RGS3_5end |
Coexpression cluster: | C140_Renal_Endothelial_Hepatic_Lymphatic_heart_lung_spleen |
Association with transcript: | 24bp_to_ENST00000394646_5end |
EntrezGene: | RGS3 |
HGNC: | 9999 |
UniProt: | B3KUB2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 9.53e-89 | 36 |
endothelial cell of vascular tree | 5.68e-87 | 24 |
meso-epithelial cell | 2.04e-69 | 45 |
blood vessel endothelial cell | 1.92e-65 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.92e-65 | 18 |
lining cell | 4.36e-52 | 58 |
barrier cell | 4.36e-52 | 58 |
endothelial cell of artery | 1.80e-33 | 9 |
vein endothelial cell | 4.38e-23 | 6 |
aortic endothelial cell | 6.62e-23 | 6 |
lymphangioblast | 1.04e-22 | 6 |
endothelial cell of lymphatic vessel | 1.04e-22 | 6 |
vascular lymphangioblast | 1.04e-22 | 6 |
mesodermal cell | 6.49e-21 | 121 |
squamous epithelial cell | 2.39e-15 | 63 |
endothelial cell of umbilical vein | 2.76e-12 | 3 |
glomerular endothelial cell | 4.66e-12 | 5 |
capillary endothelial cell | 5.02e-12 | 3 |
thoracic aorta endothelial cell | 8.18e-09 | 2 |
endothelial cell of sinusoid | 1.07e-08 | 2 |
endothelial cell of hepatic sinusoid | 1.07e-08 | 2 |
glomerular cell | 1.27e-08 | 7 |
kidney corpuscule cell | 1.27e-08 | 7 |