FFCP PHASE1:Hg19::chr1:1167327..1167338,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51150 | |EntrezGene=51150 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24188 | |HGNC=24188 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=9bp_to_ENST00000459994_5end | |association_with_transcript=9bp_to_ENST00000459994_5end | ||
|cluster_id=chr1:1167327..1167338,- | |||
|description=CAGE_peak_4_at_SDF4_5end | |description=CAGE_peak_4_at_SDF4_5end | ||
|id=chr1:1167327..1167338,- | |id=chr1:1167327..1167338,- | ||
|ontology_enrichment_celltype=CL:0000222!8.88e-15!119;CL:0000055!4.82e-14!180;CL:0000144!1.94e-11!625;CL:0000548!2.12e-10!679;CL:0000004!2.12e-10!679;CL:0000255!2.12e-10!679;CL:0002371!2.44e-10!591;CL:0000183!4.13e-10!59;CL:0000012!9.22e-10!682;CL:0000680!1.69e-09!57;CL:0000056!1.69e-09!57;CL:0000355!1.69e-09!57;CL:0000192!2.78e-09!42;CL:0000514!2.78e-09!42;CL:0000057!8.24e-09!75;CL:0000048!9.06e-09!430;CL:0000187!9.90e-09!54;CL:0000723!2.78e-08!436;CL:0000359!3.92e-08!32;CL:0000034!1.02e-07!444;CL:0000213!2.11e-07!57;CL:0000215!2.11e-07!57;CL:0000220!2.81e-07!246;CL:0002321!3.20e-07!248;CL:0000393!6.02e-07!60;CL:0000211!6.02e-07!60 | |ontology_enrichment_celltype=CL:0000222!8.88e-15!119;CL:0000055!4.82e-14!180;CL:0000144!1.94e-11!625;CL:0000548!2.12e-10!679;CL:0000004!2.12e-10!679;CL:0000255!2.12e-10!679;CL:0002371!2.44e-10!591;CL:0000183!4.13e-10!59;CL:0000012!9.22e-10!682;CL:0000680!1.69e-09!57;CL:0000056!1.69e-09!57;CL:0000355!1.69e-09!57;CL:0000192!2.78e-09!42;CL:0000514!2.78e-09!42;CL:0000057!8.24e-09!75;CL:0000048!9.06e-09!430;CL:0000187!9.90e-09!54;CL:0000723!2.78e-08!436;CL:0000359!3.92e-08!32;CL:0000034!1.02e-07!444;CL:0000213!2.11e-07!57;CL:0000215!2.11e-07!57;CL:0000220!2.81e-07!246;CL:0002321!3.20e-07!248;CL:0000393!6.02e-07!60;CL:0000211!6.02e-07!60 | ||
|ontology_enrichment_celltype_v019=CL:0000359;2.13e-08;32!CL:0000192;2.46e-07;43 | |ontology_enrichment_celltype_v019=CL:0000359;2.13e-08;32!CL:0000192;2.46e-07;43 | ||
|ontology_enrichment_celltype_v019_2=CL:0000222,2.66e-15,121;CL:0000680,2.50e-09,58;CL:0000056,2.50e-09,58;CL:0000355,2.50e-09,58;CL:0000057,4.29e-09,76;CL:0000192,4.69e-09,43;CL:0000514,4.69e-09,43;CL:0000048,5.27e-09,427;CL:0000187,1.46e-08,55;CL:0000723,1.51e-08,433;CL:0000359,3.56e-08,32;CL:0000034,4.93e-08,441;CL:0000213,6.16e-08,58;CL:0000215,6.16e-08,58;CL:0002321,2.43e-07,250;CL:0000393,6.74e-07,61;CL:0000211,6.74e-07,61 | |||
|ontology_enrichment_development_v019=CL:0000514;2.46e-07;43 | |ontology_enrichment_development_v019=CL:0000514;2.46e-07;43 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003914!2.12e-15!118;UBERON:0000926!9.47e-15!448;UBERON:0004120!9.47e-15!448;UBERON:0006603!9.47e-15!448;UBERON:0000055!1.06e-13!69;UBERON:0001981!1.25e-13!60;UBERON:0007500!1.25e-13!60;UBERON:0004537!1.25e-13!60;UBERON:0006965!1.25e-13!60;UBERON:0002049!2.86e-13!79;UBERON:0007798!2.86e-13!79;UBERON:0005256!1.36e-12!143;UBERON:0001637!5.81e-12!42;UBERON:0003509!5.81e-12!42;UBERON:0004572!5.81e-12!42;UBERON:0004872!1.69e-11!84;UBERON:0001009!2.53e-10!113;UBERON:0004535!2.84e-10!110;UBERON:0002100!5.09e-10!216;UBERON:0004290!1.57e-09!70;UBERON:0004573!1.73e-09!33;UBERON:0004571!1.73e-09!33;UBERON:0000468!2.69e-09!659;UBERON:0000914!3.00e-09!83;UBERON:0002329!3.00e-09!83;UBERON:0003077!3.00e-09!83;UBERON:0003059!3.00e-09!83;UBERON:0007282!3.00e-09!83;UBERON:0009618!3.00e-09!83;UBERON:0007285!3.00e-09!83;UBERON:0003081!9.05e-09!216;UBERON:0000490!1.99e-08!138;UBERON:0001134!2.67e-08!61;UBERON:0002036!2.67e-08!61;UBERON:0003082!2.67e-08!61;UBERON:0000467!2.94e-08!625;UBERON:0003104!4.16e-08!238;UBERON:0009142!4.16e-08!238;UBERON:0000486!4.85e-08!82;UBERON:0000480!4.97e-08!626;UBERON:0002385!5.82e-08!63;UBERON:0001015!5.82e-08!63;UBERON:0000383!5.82e-08!63;UBERON:0002204!8.26e-08!167 | |ontology_enrichment_uberon=UBERON:0003914!2.12e-15!118;UBERON:0000926!9.47e-15!448;UBERON:0004120!9.47e-15!448;UBERON:0006603!9.47e-15!448;UBERON:0000055!1.06e-13!69;UBERON:0001981!1.25e-13!60;UBERON:0007500!1.25e-13!60;UBERON:0004537!1.25e-13!60;UBERON:0006965!1.25e-13!60;UBERON:0002049!2.86e-13!79;UBERON:0007798!2.86e-13!79;UBERON:0005256!1.36e-12!143;UBERON:0001637!5.81e-12!42;UBERON:0003509!5.81e-12!42;UBERON:0004572!5.81e-12!42;UBERON:0004872!1.69e-11!84;UBERON:0001009!2.53e-10!113;UBERON:0004535!2.84e-10!110;UBERON:0002100!5.09e-10!216;UBERON:0004290!1.57e-09!70;UBERON:0004573!1.73e-09!33;UBERON:0004571!1.73e-09!33;UBERON:0000468!2.69e-09!659;UBERON:0000914!3.00e-09!83;UBERON:0002329!3.00e-09!83;UBERON:0003077!3.00e-09!83;UBERON:0003059!3.00e-09!83;UBERON:0007282!3.00e-09!83;UBERON:0009618!3.00e-09!83;UBERON:0007285!3.00e-09!83;UBERON:0003081!9.05e-09!216;UBERON:0000490!1.99e-08!138;UBERON:0001134!2.67e-08!61;UBERON:0002036!2.67e-08!61;UBERON:0003082!2.67e-08!61;UBERON:0000467!2.94e-08!625;UBERON:0003104!4.16e-08!238;UBERON:0009142!4.16e-08!238;UBERON:0000486!4.85e-08!82;UBERON:0000480!4.97e-08!626;UBERON:0002385!5.82e-08!63;UBERON:0001015!5.82e-08!63;UBERON:0000383!5.82e-08!63;UBERON:0002204!8.26e-08!167 | ||
|ontology_enrichment_uberon_v019=UBERON:0001637;1.96e-09;42!UBERON:0003509;1.96e-09;42!UBERON:0004572;1.96e-09;42!UBERON:0004573;5.88e-09;33!UBERON:0004571;5.88e-09;33!UBERON:0007500;7.99e-08;56!UBERON:0001981;7.99e-08;56!UBERON:0004537;7.99e-08;56!UBERON:0003914;5.44e-07;74!UBERON:0000055;9.27e-07;65 | |ontology_enrichment_uberon_v019=UBERON:0001637;1.96e-09;42!UBERON:0003509;1.96e-09;42!UBERON:0004572;1.96e-09;42!UBERON:0004573;5.88e-09;33!UBERON:0004571;5.88e-09;33!UBERON:0007500;7.99e-08;56!UBERON:0001981;7.99e-08;56!UBERON:0004537;7.99e-08;56!UBERON:0003914;5.44e-07;74!UBERON:0000055;9.27e-07;65 | ||
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| ||
|short_description=p4@SDF4 | |short_description=p4@SDF4 | ||
}} | }} |
Latest revision as of 08:33, 16 September 2015
Short description: | p4@SDF4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SDF4_5end |
Coexpression cluster: | NA |
Association with transcript: | 9bp_to_ENST00000459994_5end |
EntrezGene: | SDF4 |
HGNC: | 24188 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 2.66e-15 | 121 |
muscle precursor cell | 2.50e-09 | 58 |
myoblast | 2.50e-09 | 58 |
multi-potent skeletal muscle stem cell | 2.50e-09 | 58 |
fibroblast | 4.29e-09 | 76 |
smooth muscle cell | 4.69e-09 | 43 |
smooth muscle myoblast | 4.69e-09 | 43 |
multi fate stem cell | 5.27e-09 | 427 |
muscle cell | 1.46e-08 | 55 |
somatic stem cell | 1.51e-08 | 433 |
vascular associated smooth muscle cell | 3.56e-08 | 32 |
stem cell | 4.93e-08 | 441 |
lining cell | 6.16e-08 | 58 |
barrier cell | 6.16e-08 | 58 |
embryonic cell | 2.43e-07 | 250 |
electrically responsive cell | 6.74e-07 | 61 |
electrically active cell | 6.74e-07 | 61 |