FFCP PHASE1:Hg19::chr12:117287313..117287326,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:117287313..117287326,+ | |||
|description=CAGE_peak_at_chr12:117287313..117287326,+ | |description=CAGE_peak_at_chr12:117287313..117287326,+ | ||
|id=chr12:117287313..117287326,+ | |id=chr12:117287313..117287326,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000785;1.01e-11;1!CL:0000819;1.01e-11;1!CL:0002322;6.69e-09;5!CL:0000147;4.96e-07;14 | |ontology_enrichment_celltype_v019=CL:0000785;1.01e-11;1!CL:0000819;1.01e-11;1!CL:0002322;6.69e-09;5!CL:0000147;4.96e-07;14 | ||
|ontology_enrichment_celltype_v019_2=CL:0000819,1.06e-11,1;CL:0002322,8.17e-09,5;CL:0000147,5.45e-07,14 | |||
|ontology_enrichment_development_v019=UBERON:0005425;2.67e-11;1 | |ontology_enrichment_development_v019=UBERON:0005425;2.67e-11;1 | ||
|ontology_enrichment_disease=DOID:0050687!8.65e-11!143;DOID:305!2.78e-09!106;DOID:162!1.54e-07!235;DOID:14566!1.61e-07!239;DOID:3095!1.83e-07!22;DOID:2994!1.83e-07!22 | |ontology_enrichment_disease=DOID:0050687!8.65e-11!143;DOID:305!2.78e-09!106;DOID:162!1.54e-07!235;DOID:14566!1.61e-07!239;DOID:3095!1.83e-07!22;DOID:2994!1.83e-07!22 | ||
|ontology_enrichment_disease_v019=DOID:0060073;1.01e-11;1!DOID:8675;1.01e-11;1 | |ontology_enrichment_disease_v019=DOID:0060073;1.01e-11;1!DOID:8675;1.01e-11;1 | ||
|ontology_enrichment_disease_v019_2=DOID:0060073,1.06e-11,1;DOID:8675,1.06e-11,1 | |||
|ontology_enrichment_uberon=UBERON:0000073!6.56e-19!94;UBERON:0001016!6.56e-19!94;UBERON:0005743!2.62e-16!86;UBERON:0001017!3.31e-15!82;UBERON:0000955!9.54e-14!69;UBERON:0006238!9.54e-14!69;UBERON:0001893!2.01e-13!34;UBERON:0002020!2.10e-13!34;UBERON:0003528!2.10e-13!34;UBERON:0002780!4.47e-13!41;UBERON:0001890!4.47e-13!41;UBERON:0006240!4.47e-13!41;UBERON:0001049!4.95e-13!57;UBERON:0005068!4.95e-13!57;UBERON:0006241!4.95e-13!57;UBERON:0007135!4.95e-13!57;UBERON:0001869!7.93e-13!32;UBERON:0002791!1.01e-12!33;UBERON:0003080!1.62e-12!42;UBERON:0002616!2.88e-12!59;UBERON:0000956!6.69e-12!25;UBERON:0000203!6.69e-12!25;UBERON:0000924!9.24e-12!173;UBERON:0006601!9.24e-12!173;UBERON:0003056!1.76e-11!61;UBERON:0002346!3.47e-11!90;UBERON:0004121!3.78e-11!169;UBERON:0003075!1.50e-10!86;UBERON:0007284!1.50e-10!86;UBERON:0002619!2.52e-10!22;UBERON:0001950!2.83e-10!20;UBERON:0000033!1.34e-09!123;UBERON:0000153!1.99e-09!129;UBERON:0007811!1.99e-09!129;UBERON:0000064!4.93e-07!219 | |ontology_enrichment_uberon=UBERON:0000073!6.56e-19!94;UBERON:0001016!6.56e-19!94;UBERON:0005743!2.62e-16!86;UBERON:0001017!3.31e-15!82;UBERON:0000955!9.54e-14!69;UBERON:0006238!9.54e-14!69;UBERON:0001893!2.01e-13!34;UBERON:0002020!2.10e-13!34;UBERON:0003528!2.10e-13!34;UBERON:0002780!4.47e-13!41;UBERON:0001890!4.47e-13!41;UBERON:0006240!4.47e-13!41;UBERON:0001049!4.95e-13!57;UBERON:0005068!4.95e-13!57;UBERON:0006241!4.95e-13!57;UBERON:0007135!4.95e-13!57;UBERON:0001869!7.93e-13!32;UBERON:0002791!1.01e-12!33;UBERON:0003080!1.62e-12!42;UBERON:0002616!2.88e-12!59;UBERON:0000956!6.69e-12!25;UBERON:0000203!6.69e-12!25;UBERON:0000924!9.24e-12!173;UBERON:0006601!9.24e-12!173;UBERON:0003056!1.76e-11!61;UBERON:0002346!3.47e-11!90;UBERON:0004121!3.78e-11!169;UBERON:0003075!1.50e-10!86;UBERON:0007284!1.50e-10!86;UBERON:0002619!2.52e-10!22;UBERON:0001950!2.83e-10!20;UBERON:0000033!1.34e-09!123;UBERON:0000153!1.99e-09!129;UBERON:0007811!1.99e-09!129;UBERON:0000064!4.93e-07!219 | ||
|ontology_enrichment_uberon_v019=UBERON:0000941;2.67e-11;1!UBERON:0001785;2.67e-11;1!UBERON:0002464;2.67e-11;1!UBERON:0004904;2.67e-11;1!UBERON:0001021;2.67e-11;1!UBERON:0001950;7.00e-08;20!UBERON:0000200;1.02e-07;6!UBERON:0002619;3.30e-07;22 | |ontology_enrichment_uberon_v019=UBERON:0000941;2.67e-11;1!UBERON:0001785;2.67e-11;1!UBERON:0002464;2.67e-11;1!UBERON:0004904;2.67e-11;1!UBERON:0001021;2.67e-11;1!UBERON:0001950;7.00e-08;20!UBERON:0000200;1.02e-07;6!UBERON:0002619;3.30e-07;22 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,1.97e-11,1;UBERON:0001785,1.97e-11,1;UBERON:0002464,1.97e-11,1;UBERON:0004904,1.97e-11,1;UBERON:0001021,1.97e-11,1;UBERON:0003902,1.97e-11,1;UBERON:0005425,1.97e-11,1;UBERON:0001781,3.46e-11,4;UBERON:0001950,5.13e-08,20;UBERON:0000200,8.10e-08,6;UBERON:0000966,9.58e-08,6;UBERON:0005388,9.58e-08,6;UBERON:0001802,9.58e-08,6;UBERON:0002619,2.49e-07,22 | |||
|phase1_expression=0,0,0,0,0.446961094427288,0,0,0,0,0,0,0.218441372130172,0.263766978228454,0.123766352960047,0,0.672325146451775,0,0,0,0,0,0.313454721478088,0.85870796139317,0.273748850145768,0.125542639594803,0.382067028739756,0.57470412614962,0.0787107813136792,0,0,0,0,0,0,0.542270404062111,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0.541607727530031,0.25618263945135,0,0.328875809207352,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0,0,0,0,0.289693037921647,0,0,0.283604451492204,0,0.263504357079378,0.261958150995425,0,0,0,0.174129737299267,0,0,0,0,0,0,0,0,0.419499436209906,0,0,0,0,0,0,1.52054421143703,0,0,0,0.17859945656816,0,0,0,0,0,0,0,0,0,0,0,0.286836620748814,0,0,1.06748995729705,0,0,0.134710672069688,0,0,0,0,0,0,0,0.117434498643765,0,0,0.204154171254893,0.491337269247072,0.103325781175765,0,0,0,0,0.336672227908132,0.125118519871964,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0.18611685633159,0,0,0,0,0,0,0,0,0,0,0,0,0,1.16193942869518,0.725627385107593,1.26160425437814,0.72995471815166,0,0,0,0,0,0.354920400119532,0.842923450390509,0.482022059766964,0.441175890929576,0,0.237270619111097,0,0.392442930250692,0.769494313892781,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231860809950154,0,0.144366447761074,0,0,0,0,0,0.234004265139238,0.148631162288728,0,0,0,0.179117045405697,0,0,0,0.088048434013226,0,0,0,0.253991577168676,0,0,0,0.308482478109971,0.600686115687835,0.285826432630578,0.112131084345361,0.43596006883328,0.2933531432838,0,0,0,0,0,0.514414748524284,0,0.266422179016099,0,0.542621605391443,0,0,0,0.791951872933429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.508189248444927,0,0,0.335032530668698,1.27587750330633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0.391602314925481,0,0,0,0,0,0,0,0.248107807818777,0,0,0,0,0,0,0,0,0.0821271560138091,0,0.116210378459959,0.120859449591622,0,0,0.114814448164607,0,0,0.902399225814824,0.231046011313244,0,0,0.316654886678627,0,0.170093705276516,0,0,0.541892875087706,0,0,0,0,0,0,2.82095137628028,0,0.325378394664303,0,0.0915694648183434,0,0,0,0,0.193341436584244,0.154048617114644,0,0,0,0.145016693914229,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0.359744915166629,0,0.235624804691373,0,0,0,0,0,0,0.136499911407986,0,0,0,0.66343897524122,0,0,0,0,0,0,0,0.196498082026242,0,0,0,0,0.379473173765715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.427296284509893,0,0,0.185803175125719,0.28853842595289,0,0.159426272728822,0,0,0,0,0,0,0,0,0,0.1605880751037,0,0,0,0,0,0.166849141711909,0.390776190804081,0.278406173895242,0,0,0,0,0.18714054040822,0,0.36408156524854,0,0.568272293612826,0.23874448473769,0,0,0,0.140669416410513,0.445234820091624,0,0,0,0,0.251932747854276,0,0.123084805461069,0,0,0.716084698702437,0,0,0,0,0.969332746095218,0.556608588971108,1.99613798001194,0,0.0874599999961957,0,1.365521379426,0.762760950878299,0,0,0.291604613383254,0.173624994933292,0,0.120596438625408,0,0.110579259931225,0.295547618953547,0,0.10893846351899,0,0,0,1.38338342632836,0.807818799687949,0.434589487688032,0,0,0.533034776018635,0,0,0,0,0,0,0.569261198172555,0.158936578980379,0.421996129056054,0.163232808159148,0.141353071433941,0,0,0,0,0,0.247127877893006,0.104421949505455,0.134802265961354,0,0,2.37191225980366,0.19566461893209,0,0,0,0.91821828489147,0,0,0.414752765588989,0,0,0,0,0.284609546029793,0.416024019039416,0,0,0,0,0,0.290268993867255,0.292357268344742,0.492692742319255,0,0,0.90392296312213,0,0,0.696418755514666,0,0,0,0.999048047910651,0.144090417154106,0.229073192331831,0,0,0.248505071130865,0,0.135904206073614,0,0,0,0,0.136905378891993,0,0,0.525774708558629,0,0,0,0,0,0,0,0,0,0,0.247247575143499,0.0674035438541849,0,0,0.795229689809303,0,0.321506296930038,0.687697182986169,0.83088067605837,0,0,0.364497339948148,0,0,0.0524545881349981,0,0.35857467866569,0,0,0,0,0,0,0,0,0,0.170388021785422,0.113312091520126,0,0,0.258565912723101,0.26446520348538,0.171086837884329,0,0,0,0,0,0,0.121792598380896,0,0,0,0,0,0,1.77213635993397,3.05065662254908,0.250381861413,0,0.110929051536852,0.124192805882767,1.10678907948985,0,0,0,0.235265819698172,0,1.1593682288866,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0,0,0,0,0,0.226705925512272,0,0,0,0,0.219284049578707,0.176689145945881,0.192914038270915,0,0.512483037175893,0,0,0.414775308455192,0,0.132864840313363,0,0,0,0,0.19998739585493,0.640150378164845,0.172214979660816,0.567515953566836,0.184105950251841,0,0,0.127894371303652,0.539124056983409,0.471797825567689,0.655257829152084,0.169732529954025,0.212574920101683,0,0,0,0.0788617450012534,0,0,0.3062454773532,0.321146125482298,0,0.159633859057151,1.43581454968528,0.756215088665154,0.345786262321089,0.161475645631851,1.42769420259154,0.294443155503077,0.353909170043221,0,0.115525666150338,0,0,0,0,0,0,0,0,0,0.540300676947157,1.56215619722769,0,0.507326481551255,0.546974809018219,0,0.4962111783892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| ||
|short_description=p@chr12:117287313..117287326,+ | |short_description=p@chr12:117287313..117287326,+ | ||
}} | }} |
Latest revision as of 05:26, 24 July 2015
Short description: | p@chr12:117287313..117287326, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:117287313..117287326, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B-1 B cell | 1.06e-11 | 1 |
embryonic stem cell | 8.17e-09 | 5 |
pigment cell | 5.45e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 1.97e-11 | 1 |
cranial nerve | 1.97e-11 | 1 |
nerve trunk | 1.97e-11 | 1 |
nerve connecting eye with brain | 1.97e-11 | 1 |
nerve | 1.97e-11 | 1 |
retinal neural layer | 1.97e-11 | 1 |
presumptive neural retina | 1.97e-11 | 1 |
layer of retina | 3.46e-11 | 4 |
neocortex | 5.13e-08 | 20 |
gyrus | 8.10e-08 | 6 |
retina | 9.58e-08 | 6 |
photoreceptor array | 9.58e-08 | 6 |
posterior segment of eyeball | 9.58e-08 | 6 |
regional part of cerebral cortex | 2.49e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
lymphatic system cancer | 1.06e-11 | 1 |
lymphosarcoma | 1.06e-11 | 1 |