FFCP PHASE1:Hg19::chr19:14629264..14629275,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3337 | |EntrezGene=3337 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5270 | |HGNC=5270 | ||
|TSSclassifier=strong | |||
|UniProt=P25685,Q6FHS4 | |UniProt=P25685,Q6FHS4 | ||
|association_with_transcript=-63bp_to_ENST00000254322,NM_006145,uc002myz.1_5end | |association_with_transcript=-63bp_to_ENST00000254322,NM_006145,uc002myz.1_5end | ||
|cluster_id=chr19:14629264..14629275,- | |||
|description=CAGE_peak_3_at_DNAJB1_5end | |description=CAGE_peak_3_at_DNAJB1_5end | ||
|id=chr19:14629264..14629275,- | |id=chr19:14629264..14629275,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!2.26e-12!94;UBERON:0001016!2.26e-12!94;UBERON:0001017!9.74e-12!82;UBERON:0005743!1.18e-11!86;UBERON:0007023!2.43e-11!115;UBERON:0000955!8.56e-10!69;UBERON:0006238!8.56e-10!69;UBERON:0002616!1.73e-08!59;UBERON:0001049!6.08e-08!57;UBERON:0005068!6.08e-08!57;UBERON:0006241!6.08e-08!57;UBERON:0007135!6.08e-08!57;UBERON:0001869!8.23e-08!32;UBERON:0001950!9.86e-08!20;UBERON:0002780!2.85e-07!41;UBERON:0001890!2.85e-07!41;UBERON:0006240!2.85e-07!41;UBERON:0003075!3.51e-07!86;UBERON:0007284!3.51e-07!86;UBERON:0001893!3.56e-07!34;UBERON:0000956!4.29e-07!25;UBERON:0000203!4.29e-07!25;UBERON:0000153!6.96e-07!129;UBERON:0007811!6.96e-07!129;UBERON:0002346!9.47e-07!90 | |ontology_enrichment_uberon=UBERON:0000073!2.26e-12!94;UBERON:0001016!2.26e-12!94;UBERON:0001017!9.74e-12!82;UBERON:0005743!1.18e-11!86;UBERON:0007023!2.43e-11!115;UBERON:0000955!8.56e-10!69;UBERON:0006238!8.56e-10!69;UBERON:0002616!1.73e-08!59;UBERON:0001049!6.08e-08!57;UBERON:0005068!6.08e-08!57;UBERON:0006241!6.08e-08!57;UBERON:0007135!6.08e-08!57;UBERON:0001869!8.23e-08!32;UBERON:0001950!9.86e-08!20;UBERON:0002780!2.85e-07!41;UBERON:0001890!2.85e-07!41;UBERON:0006240!2.85e-07!41;UBERON:0003075!3.51e-07!86;UBERON:0007284!3.51e-07!86;UBERON:0001893!3.56e-07!34;UBERON:0000956!4.29e-07!25;UBERON:0000203!4.29e-07!25;UBERON:0000153!6.96e-07!129;UBERON:0007811!6.96e-07!129;UBERON:0002346!9.47e-07!90 | ||
|ontology_enrichment_uberon_v019=UBERON:0001950;3.38e-08;20!UBERON:0002619;1.54e-07;22!UBERON:0000956;1.84e-07;25!UBERON:0000203;1.84e-07;25!UBERON:0001869;2.65e-07;32!UBERON:0001893;4.54e-07;34 | |ontology_enrichment_uberon_v019=UBERON:0001950;3.38e-08;20!UBERON:0002619;1.54e-07;22!UBERON:0000956;1.84e-07;25!UBERON:0000203;1.84e-07;25!UBERON:0001869;2.65e-07;32!UBERON:0001893;4.54e-07;34 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.67e-13,89;UBERON:0001017,2.64e-12,81;UBERON:0000955,1.44e-10,68;UBERON:0006238,1.44e-10,68;UBERON:0007023,4.91e-10,114;UBERON:0000073,8.74e-09,53;UBERON:0002616,8.74e-09,53;UBERON:0001049,1.92e-08,56;UBERON:0005068,1.92e-08,56;UBERON:0006241,1.92e-08,56;UBERON:0007135,1.92e-08,56;UBERON:0001950,2.72e-08,20;UBERON:0001869,3.88e-08,32;UBERON:0002780,6.92e-08,41;UBERON:0001890,6.92e-08,41;UBERON:0003080,6.92e-08,41;UBERON:0006240,6.92e-08,41;UBERON:0001893,1.16e-07,34;UBERON:0000956,1.55e-07,25;UBERON:0000203,1.55e-07,25;UBERON:0002619,2.02e-07,22;UBERON:0004121,2.54e-07,171;UBERON:0000924,2.54e-07,171;UBERON:0006601,2.54e-07,171;UBERON:0002791,4.58e-07,32 | |||
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| ||
|short_description=p3@DNAJB1 | |short_description=p3@DNAJB1 | ||
}} | }} |
Latest revision as of 05:16, 16 September 2015
Short description: | p3@DNAJB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_DNAJB1_5end |
Coexpression cluster: | NA |
Association with transcript: | -63bp_to_ENST00000254322, NM_006145, uc002myz.1_5end |
EntrezGene: | DNAJB1 |
HGNC: | 5270 |
UniProt: | P25685Q6FHS4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nervous system | 1.67e-13 | 89 |
central nervous system | 2.64e-12 | 81 |
brain | 1.44e-10 | 68 |
future brain | 1.44e-10 | 68 |
adult organism | 4.91e-10 | 114 |
regional part of nervous system | 8.74e-09 | 53 |
regional part of brain | 8.74e-09 | 53 |
neural tube | 1.92e-08 | 56 |
neural rod | 1.92e-08 | 56 |
future spinal cord | 1.92e-08 | 56 |
neural keel | 1.92e-08 | 56 |
neocortex | 2.72e-08 | 20 |
cerebral hemisphere | 3.88e-08 | 32 |
regional part of forebrain | 6.92e-08 | 41 |
forebrain | 6.92e-08 | 41 |
anterior neural tube | 6.92e-08 | 41 |
future forebrain | 6.92e-08 | 41 |
telencephalon | 1.16e-07 | 34 |
cerebral cortex | 1.55e-07 | 25 |
pallium | 1.55e-07 | 25 |
regional part of cerebral cortex | 2.02e-07 | 22 |
ectoderm-derived structure | 2.54e-07 | 171 |
ectoderm | 2.54e-07 | 171 |
presumptive ectoderm | 2.54e-07 | 171 |
regional part of telencephalon | 4.58e-07 | 32 |