FFCP PHASE1:Hg19::chr21:47531422..47531446,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr21:47531422..47531446,+
|short_description=p14@COL6A2
|description=CAGE_peak_14_at_COL6A2_5end
|association_with_transcript=31bp_to_EU832113,EU832207_5end
|...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1292 | |EntrezGene=1292 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2212 | |HGNC=2212 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=31bp_to_EU832113,EU832207_5end | |||
|cluster_id=chr21:47531422..47531446,+ | |||
|coexpression_cluster_id=C198 | |||
|description=CAGE_peak_14_at_COL6A2_5end | |||
|id=chr21:47531422..47531446,+ | |||
|ontology_enrichment_celltype=CL:0000055!3.82e-41!180;CL:0000057!6.98e-26!75;CL:0000680!1.62e-17!57;CL:0000056!1.62e-17!57;CL:0000355!1.62e-17!57;CL:0000187!1.41e-16!54;CL:0000183!1.11e-15!59;CL:0000393!8.10e-15!60;CL:0000211!8.10e-15!60;CL:0000192!4.31e-14!42;CL:0000514!4.31e-14!42;CL:0000048!5.61e-12!430;CL:0000723!6.22e-11!436;CL:0000359!7.23e-11!32;CL:0000034!8.63e-11!444;CL:0002620!2.25e-10!23;CL:0000222!3.98e-08!119;CL:0000499!5.64e-07!27;CL:0002570!9.91e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0002620;3.07e-13;23!CL:0000723;2.58e-12;61!CL:0000057;3.11e-12;73!CL:0000134;1.15e-11;55!CL:0000048;6.72e-11;58!CL:0002320;5.60e-10;188!CL:0000192;5.81e-10;43!CL:0000359;2.86e-09;32!CL:0000187;3.93e-09;55!CL:0000034;2.19e-08;69!CL:0002570;2.74e-08;8!CL:0000393;3.46e-08;61!CL:0000211;3.46e-08;61!CL:0002334;7.25e-08;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,4.16e-31,76;CL:0000048,1.38e-21,427;CL:0000723,1.59e-20,433;CL:0000034,3.63e-19,441;CL:0000680,5.10e-17,58;CL:0000056,5.10e-17,58;CL:0000355,5.10e-17,58;CL:0000187,7.63e-16,55;CL:0000393,1.31e-13,61;CL:0000211,1.31e-13,61;CL:0000192,1.94e-13,43;CL:0000514,1.94e-13,43;CL:0002620,2.78e-13,23;CL:0002320,1.00e-11,361;CL:0000359,9.97e-10,32;CL:0000134,1.81e-09,354;CL:0002570,2.68e-08,8;CL:0002334,6.61e-08,12;CL:0000136,4.78e-07,15;CL:0000219,4.80e-07,386 | |||
|ontology_enrichment_development_v019=CL:0000514;5.81e-10;43!CL:0000355;2.46e-09;58 | |||
|ontology_enrichment_disease=DOID:2394!7.58e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;5.11e-09;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,4.80e-09,14 | |||
|ontology_enrichment_uberon=UBERON:0000914!2.29e-23!83;UBERON:0002329!2.29e-23!83;UBERON:0003077!2.29e-23!83;UBERON:0003059!2.29e-23!83;UBERON:0007282!2.29e-23!83;UBERON:0009618!2.29e-23!83;UBERON:0007285!2.29e-23!83;UBERON:0004290!2.80e-22!70;UBERON:0002385!3.58e-18!63;UBERON:0001015!3.58e-18!63;UBERON:0000383!3.58e-18!63;UBERON:0000486!5.66e-18!82;UBERON:0001134!1.10e-17!61;UBERON:0002036!1.10e-17!61;UBERON:0003082!1.10e-17!61;UBERON:0005256!7.61e-16!143;UBERON:0003102!1.40e-11!95;UBERON:0002199!2.08e-11!45;UBERON:0002416!2.08e-11!45;UBERON:0002100!6.20e-11!216;UBERON:0001013!2.37e-09!14;UBERON:0002097!7.02e-09!40;UBERON:0004872!6.86e-08!84;UBERON:0000475!1.10e-07!365;UBERON:0003104!1.78e-07!238;UBERON:0009142!1.78e-07!238;UBERON:0004573!3.09e-07!33;UBERON:0004571!3.09e-07!33;UBERON:0001637!3.51e-07!42;UBERON:0003509!3.51e-07!42;UBERON:0004572!3.51e-07!42 | |||
|ontology_enrichment_uberon_v019=UBERON:0001013;1.39e-11;14!UBERON:0002384;4.30e-10;198!UBERON:0002199;4.59e-10;46!UBERON:0002416;4.59e-10;46!UBERON:0003102;1.95e-09;50!UBERON:0002385;2.24e-09;31!UBERON:0001015;2.24e-09;31!UBERON:0000383;2.24e-09;31!UBERON:0002097;4.07e-09;41!UBERON:0004573;3.56e-08;33!UBERON:0004571;3.56e-08;33!UBERON:0002067;9.25e-08;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007524,7.03e-23,73;UBERON:0002329,1.00e-22,71;UBERON:0003059,1.00e-22,71;UBERON:0007282,1.00e-22,71;UBERON:0004290,1.00e-22,71;UBERON:0009618,1.00e-22,71;UBERON:0003077,3.94e-22,72;UBERON:0007285,3.94e-22,72;UBERON:0007503,1.78e-20,78;UBERON:0000486,1.01e-18,83;UBERON:0005256,1.05e-17,122;UBERON:0002385,2.99e-17,64;UBERON:0001015,2.99e-17,64;UBERON:0000383,2.99e-17,64;UBERON:0001134,3.66e-17,62;UBERON:0002036,3.66e-17,62;UBERON:0003082,3.66e-17,62;UBERON:0003104,9.52e-17,160;UBERON:0009142,9.52e-17,160;UBERON:0002199,5.31e-15,46;UBERON:0002416,5.31e-15,46;UBERON:0003102,3.05e-14,99;UBERON:0001013,1.05e-11,14;UBERON:0002097,1.12e-11,41;UBERON:0002384,1.44e-11,371;UBERON:0000926,8.45e-11,315;UBERON:0004120,8.45e-11,315;UBERON:0006603,8.45e-11,315;UBERON:0002100,2.03e-09,199;UBERON:0004573,5.31e-09,33;UBERON:0004571,5.31e-09,33;UBERON:0001637,5.73e-09,42;UBERON:0003509,5.73e-09,42;UBERON:0004572,5.73e-09,42;UBERON:0000490,4.76e-08,148;UBERON:0002067,1.28e-07,9;UBERON:0004016,1.28e-07,9;UBERON:0010083,1.28e-07,9;UBERON:0000479,2.52e-07,773 | |||
|phase1_expression=2.54349730978779,6.63711624062048,3.94672331468719,3.00219895059391,7.59833860526389,4.36169262050184,12.6649939084155,3.79031924056099,6.00726944859629,0,0,0,0,1.8564952944007,6.95934489028623,6.05092631806598,5.42425075221579,2.92124036154949,4.39139518911456,0.61560529038394,5.91602004608334,2.19418305034661,0.286235987131057,0.684372125364421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217010870715852,0,0,0,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318565414324097,0,0,0.150575119077773,0,0,0,0,0,0.802320587350522,0,0,0.670700859703636,0.383587685530591,2.89151321907653,3.50936537445123,3.33146993609895,3.9764297352555,7.29952305453954,0,0,0.351339142772504,0.196468613246569,0,0,0,0,0.26591592103773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0.22452937262617,0,0,0,0.183201743930407,0,0,0,3.97577561356255,1.77282716330412,3.17782033951725,8.60509862246441,3.54668382198357,1.68203280042692,2.1349799145941,2.96001058100592,1.24484414159907,2.02066008104532,1.79808093424805,2.8757911252537,5.76175924479999,0.468642863667593,3.43376084513353,1.1409436430889,4.78235777765763,3.05329696473789,4.37056949793955,5.75848307479219,2.65400422631361,6.63305313483547,4.54633437173368,2.37600571456411,14.3414818981563,0,10.0606539854273,1.17835279767846,4.00379263590285,1.10825646193673,1.31693286264251,9.19463387397059,6.61047459189026,0.226864366320042,6.09924761342131,4.91181994282705,4.87443372666992,6.60200411385685,2.98852334791473,2.83404594050192,2.41951913231067,5.73839529620305,3.21542117031955,3.28163906517349,4.97069452668416,7.75901072730297,6.39017266529906,2.31729825923573,1.86516651541536,0,0,0,0.243947412259191,0.132529768321485,0.116193942869518,0.621966330092223,0.504641701751257,0,7.8224766164908,19.2972281457866,8.28809528114883,1.39310378409594,4.33127689001751,0,0,0,0,0,0,0,0,0,0,4.20725321410337,3.2925920906512,11.7606969108434,0,0,0,0,0,0,0,0,0,0,1.62904152655162,6.23960871167747,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383382679165211,0,0,0.207328115540772,0.144119953416961,0,0.063497894292169,0,0,0,0.719792448923265,0,0.285826432630578,0.224262168690721,0.87192013766656,0.95339771567235,1.42198887333556,10.7296933755565,6.762422020448,1.59562869950922,1.04007436911366,0.257207374262142,0,2.66422179016099,1.42977993658148,5.96883765930587,0,1.30294473717494,2.84313558994037,1.58390374586686,0,0.871533458600294,0.399891964728228,0,0,0,2.15662369942424,3.44585807502342,0,2.02693829334611,3.6985738059069,1.25342674267927,0,0,0.862510299438069,0.256686072559497,0.508189248444927,1.30139853857622,0,0,0,0,0,0,3.80343624329334,6.00204625271613,4.88277042659524,2.70362119990049,2.49800584316026,1.26161932027148,1.28855556491985,2.40756879782175,31.8370505678379,6.2083842775503,0,2.58116835958384,3.5622281931914,3.72022199179207,10.6374461381365,0,0,0,0,0,1.5119514666484,2.72918588600655,1.68808170616869,7.85848264412606,3.07533958213682,2.55853624533352,1.28683136914886,1.48418066444991,5.70575867069826,5.50441348470694,1.31403449622095,7.2695620085707,7.66988497835731,0,0.200506470303285,0,2.06666006696292,7.64782905628212,7.0807184078089,0,0.231046011313244,0,0,0,1.13733384070897,0,0.215915916102139,1.54227252690289,0,0,0,0,1.11937377361089,0,0,0,0,0,0.721287081534056,0.27470839445503,0.247528499761764,1.14853107599234,0,1.6068392984416,3.38347514022427,6.932187770159,5.06562126596228,4.41077031950498,3.54486808065303,6.67076792005451,4.94314439013385,1.60257664164127,0,0,0,0,0,10.3888074454111,0.6970372701606,0.308033580176089,1.06461206063404,4.34966496037536,3.52116016297448,3.72124705529177,0.372158369359667,0.949138274156178,2.85945290885737,2.303080121802,2.56763392820352,4.45484547096312,9.41938368239076,0.899362287916574,6.58888871366531,2.82749765629647,1.61745985258653,1.58510321173008,5.05510147486777,1.95053495635836,3.1682753652067,3.16950440270266,1.09199929126389,4.94919011837995,2.26016233240486,2.75682671773062,1.99031692572366,6.13831239355268,4.05142873986681,1.31178950409327,1.21746226177622,3.0982349809975,4.7888252430481,0.286822704408103,0.982490410131212,1.07001315444375,1.77380532035299,4.43326034125095,5.92730807327823,0.75894634753143,4.89908608342976,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75809815126273,0,0,0,2.86493381685228,0.296964680832639,0.307160702099232,0,0,0.556543525114529,0,0.211125408127993,4.5827037297746,1.10513566212459,0,0,0,9.02014804219242,0.179736702294654,0,0,1.87422470710174,0,0,0,0,0,0,0,2.17499872630438,0,0,0,0,0,0.347249989866585,0,0.120596438625408,0,0,0,0,0,0,2.07765697960252,0.683652335082007,0,0,0,0.957003479195758,1.09917112082235,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,2.98578579323551,0.796118080530053,2.4441205797345,0,0,0,0,4.01288823649394,0,0,0,0,2.36750641709634,0,0,0.505492637027904,0,0,0,0.330991955875499,0,0,0.2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| ||
|short_description=p14@COL6A2 | |||
}} | }} |
Latest revision as of 22:47, 18 September 2015
Short description: | p14@COL6A2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_14_at_COL6A2_5end |
Coexpression cluster: | C198_Mesenchymal_Hair_Hepatic_Fibroblast_Smooth_tenocyte_Pericytes |
Association with transcript: | 31bp_to_EU832113, EU832207_5end |
EntrezGene: | COL6A2 |
HGNC: | 2212 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 4.16e-31 | 76 |
multi fate stem cell | 1.38e-21 | 427 |
somatic stem cell | 1.59e-20 | 433 |
stem cell | 3.63e-19 | 441 |
muscle precursor cell | 5.10e-17 | 58 |
myoblast | 5.10e-17 | 58 |
multi-potent skeletal muscle stem cell | 5.10e-17 | 58 |
muscle cell | 7.63e-16 | 55 |
electrically responsive cell | 1.31e-13 | 61 |
electrically active cell | 1.31e-13 | 61 |
smooth muscle cell | 1.94e-13 | 43 |
smooth muscle myoblast | 1.94e-13 | 43 |
skin fibroblast | 2.78e-13 | 23 |
connective tissue cell | 1.00e-11 | 361 |
vascular associated smooth muscle cell | 9.97e-10 | 32 |
mesenchymal cell | 1.81e-09 | 354 |
mesenchymal stem cell of adipose | 2.68e-08 | 8 |
preadipocyte | 6.61e-08 | 12 |
fat cell | 4.78e-07 | 15 |
motile cell | 4.80e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 4.80e-09 | 14 |