FFCP PHASE1:Hg19::chr2:230786446..230786514,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9320 | |EntrezGene=9320 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12306 | |HGNC=12306 | ||
|TSSclassifier=strong | |||
|UniProt=C9JLD7 | |UniProt=C9JLD7 | ||
|association_with_transcript=-68bp_to_ENST00000430954_5end | |association_with_transcript=-68bp_to_ENST00000430954_5end | ||
|cluster_id=chr2:230786446..230786514,- | |||
|description=CAGE_peak_2_at_TRIP12_5end | |description=CAGE_peak_2_at_TRIP12_5end | ||
|id=chr2:230786446..230786514,- | |id=chr2:230786446..230786514,- | ||
|ontology_enrichment_celltype=CL:0000738!5.07e-30!140;CL:0000037!1.37e-29!172;CL:0000566!1.37e-29!172;CL:0002032!1.97e-28!165;CL:0000837!1.97e-28!165;CL:0000988!5.18e-26!182;CL:0002087!3.11e-24!119;CL:0000763!9.45e-24!112;CL:0000049!9.45e-24!112;CL:0002031!1.07e-23!124;CL:0000766!1.40e-23!76;CL:0000557!8.26e-23!71;CL:0002009!7.96e-21!65;CL:0002194!4.28e-20!63;CL:0000576!4.28e-20!63;CL:0000040!4.28e-20!63;CL:0000559!4.28e-20!63;CL:0000839!2.06e-19!70;CL:0002057!8.65e-17!42;CL:0000134!3.29e-14!358;CL:0000860!4.44e-14!45;CL:0002320!6.74e-13!365;CL:0000048!2.08e-09!430;CL:0000219!1.60e-08!390;CL:0000723!1.82e-08!436;CL:0000034!1.88e-07!444 | |ontology_enrichment_celltype=CL:0000738!5.07e-30!140;CL:0000037!1.37e-29!172;CL:0000566!1.37e-29!172;CL:0002032!1.97e-28!165;CL:0000837!1.97e-28!165;CL:0000988!5.18e-26!182;CL:0002087!3.11e-24!119;CL:0000763!9.45e-24!112;CL:0000049!9.45e-24!112;CL:0002031!1.07e-23!124;CL:0000766!1.40e-23!76;CL:0000557!8.26e-23!71;CL:0002009!7.96e-21!65;CL:0002194!4.28e-20!63;CL:0000576!4.28e-20!63;CL:0000040!4.28e-20!63;CL:0000559!4.28e-20!63;CL:0000839!2.06e-19!70;CL:0002057!8.65e-17!42;CL:0000134!3.29e-14!358;CL:0000860!4.44e-14!45;CL:0002320!6.74e-13!365;CL:0000048!2.08e-09!430;CL:0000219!1.60e-08!390;CL:0000723!1.82e-08!436;CL:0000034!1.88e-07!444 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.60e-18;33!CL:0002057;1.60e-18;33!CL:0000473;4.47e-17;39!CL:0000234;4.47e-17;39!CL:0000576;3.60e-12;48!CL:0000766;2.39e-10;69!CL:0002087;7.32e-08;104!CL:0000738;9.56e-08;136!CL:0000763;1.00e-07;100 | |ontology_enrichment_celltype_v019=CL:0000860;1.60e-18;33!CL:0002057;1.60e-18;33!CL:0000473;4.47e-17;39!CL:0000234;4.47e-17;39!CL:0000576;3.60e-12;48!CL:0000766;2.39e-10;69!CL:0002087;7.32e-08;104!CL:0000738;9.56e-08;136!CL:0000763;1.00e-07;100 | ||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.50e-31,136;CL:0000037,7.14e-31,168;CL:0002032,1.02e-29,161;CL:0000837,1.02e-29,161;CL:0000988,9.05e-28,177;CL:0002087,1.03e-25,115;CL:0000766,1.15e-25,72;CL:0000763,2.80e-25,108;CL:0000049,2.80e-25,108;CL:0002031,4.19e-25,120;CL:0000557,5.82e-25,67;CL:0002009,5.61e-23,61;CL:0002194,3.06e-22,59;CL:0000576,3.06e-22,59;CL:0000040,3.06e-22,59;CL:0000559,3.06e-22,59;CL:0000839,2.54e-21,66;CL:0000473,9.86e-19,48;CL:0000234,9.86e-19,48;CL:0000860,8.65e-17,42;CL:0002057,8.65e-17,42;CL:0000134,2.36e-15,354;CL:0002320,5.66e-14,361;CL:0000048,3.34e-10,427;CL:0000219,2.36e-09,386;CL:0000723,3.25e-09,433;CL:0000034,3.81e-08,441 | |||
|ontology_enrichment_development_v019=CL:0002057;9.70e-13;42!CL:0000049;2.52e-07;108 | |ontology_enrichment_development_v019=CL:0002057;9.70e-13;42!CL:0000049;2.52e-07;108 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.16e-27!102;UBERON:0003061!2.16e-27!102;UBERON:0002193!1.79e-22!112;UBERON:0002371!9.22e-20!80;UBERON:0001474!2.47e-18!86;UBERON:0004765!2.89e-16!101;UBERON:0001434!2.89e-16!101;UBERON:0002384!2.18e-13!375;UBERON:0002405!1.61e-12!115;UBERON:0002204!1.22e-09!167;UBERON:0000178!5.18e-07!15;UBERON:0000179!5.18e-07!15;UBERON:0000463!5.18e-07!15 | |ontology_enrichment_uberon=UBERON:0002390!2.16e-27!102;UBERON:0003061!2.16e-27!102;UBERON:0002193!1.79e-22!112;UBERON:0002371!9.22e-20!80;UBERON:0001474!2.47e-18!86;UBERON:0004765!2.89e-16!101;UBERON:0001434!2.89e-16!101;UBERON:0002384!2.18e-13!375;UBERON:0002405!1.61e-12!115;UBERON:0002204!1.22e-09!167;UBERON:0000178!5.18e-07!15;UBERON:0000179!5.18e-07!15;UBERON:0000463!5.18e-07!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;5.18e-07;15!UBERON:0000179;5.18e-07;15!UBERON:0000463;5.18e-07;15 | |ontology_enrichment_uberon_v019=UBERON:0000178;5.18e-07;15!UBERON:0000179;5.18e-07;15!UBERON:0000463;5.18e-07;15 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.09e-29,98;UBERON:0003061,3.09e-29,98;UBERON:0002193,6.14e-24,108;UBERON:0002371,1.70e-21,76;UBERON:0001474,7.09e-20,82;UBERON:0002405,2.74e-18,93;UBERON:0004765,1.10e-16,90;UBERON:0001434,2.27e-16,100;UBERON:0002384,1.78e-14,371;UBERON:0002204,1.51e-09,167;UBERON:0003081,2.27e-08,203;UBERON:0000178,5.18e-07,15;UBERON:0000179,5.18e-07,15;UBERON:0000463,5.18e-07,15 | |||
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| ||
|short_description=p2@TRIP12 | |short_description=p2@TRIP12 | ||
}} | }} |
Latest revision as of 05:47, 25 September 2015
Short description: | p2@TRIP12 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TRIP12_5end |
Coexpression cluster: | NA |
Association with transcript: | -68bp_to_ENST00000430954_5end |
EntrezGene: | TRIP12 |
HGNC: | 12306 |
UniProt: | C9JLD7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 1.50e-31 | 136 |
hematopoietic stem cell | 7.14e-31 | 168 |
hematopoietic oligopotent progenitor cell | 1.02e-29 | 161 |
hematopoietic multipotent progenitor cell | 1.02e-29 | 161 |
hematopoietic cell | 9.05e-28 | 177 |
nongranular leukocyte | 1.03e-25 | 115 |
myeloid leukocyte | 1.15e-25 | 72 |
myeloid cell | 2.80e-25 | 108 |
common myeloid progenitor | 2.80e-25 | 108 |
hematopoietic lineage restricted progenitor cell | 4.19e-25 | 120 |
granulocyte monocyte progenitor cell | 5.82e-25 | 67 |
macrophage dendritic cell progenitor | 5.61e-23 | 61 |
monopoietic cell | 3.06e-22 | 59 |
monocyte | 3.06e-22 | 59 |
monoblast | 3.06e-22 | 59 |
promonocyte | 3.06e-22 | 59 |
myeloid lineage restricted progenitor cell | 2.54e-21 | 66 |
defensive cell | 9.86e-19 | 48 |
phagocyte | 9.86e-19 | 48 |
classical monocyte | 8.65e-17 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.65e-17 | 42 |
mesenchymal cell | 2.36e-15 | 354 |
connective tissue cell | 5.66e-14 | 361 |
multi fate stem cell | 3.34e-10 | 427 |
motile cell | 2.36e-09 | 386 |
somatic stem cell | 3.25e-09 | 433 |
stem cell | 3.81e-08 | 441 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.09e-29 | 98 |
blood island | 3.09e-29 | 98 |
hemolymphoid system | 6.14e-24 | 108 |
bone marrow | 1.70e-21 | 76 |
bone element | 7.09e-20 | 82 |
immune system | 2.74e-18 | 93 |
skeletal element | 1.10e-16 | 90 |
skeletal system | 2.27e-16 | 100 |
connective tissue | 1.78e-14 | 371 |
musculoskeletal system | 1.51e-09 | 167 |
lateral plate mesoderm | 2.27e-08 | 203 |
blood | 5.18e-07 | 15 |
haemolymphatic fluid | 5.18e-07 | 15 |
organism substance | 5.18e-07 | 15 |