FFCP PHASE1:Hg19::chr11:117668248..117668250,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57453 | |EntrezGene=57453 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14656 | |HGNC=14656 | ||
|TSSclassifier=strong | |||
|UniProt=Q8TD84 | |UniProt=Q8TD84 | ||
|association_with_transcript=-272bp_to_ENST00000321322,NM_020693,uc001prh.1_5end | |association_with_transcript=-272bp_to_ENST00000321322,NM_020693,uc001prh.1_5end | ||
|cluster_id=chr11:117668248..117668250,- | |||
|coexpression_cluster_id=C41 | |coexpression_cluster_id=C41 | ||
|description=CAGE_peak_5_at_DSCAML1_5end | |description=CAGE_peak_5_at_DSCAML1_5end | ||
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|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0003056;1.22e-87;3!UBERON:0005425;1.71e-66;1 | |ontology_enrichment_development_v019=UBERON:0003056;1.22e-87;3!UBERON:0005425;1.71e-66;1 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002619!1.04e-40!22;UBERON:0001893!8.75e-40!34;UBERON:0001950!6.62e-38!20;UBERON:0001869!2.76e-37!32;UBERON:0002791!7.69e-36!33;UBERON:0000956!1.02e-35!25;UBERON:0000203!1.02e-35!25;UBERON:0000073!3.74e-33!94;UBERON:0001016!3.74e-33!94;UBERON:0002780!1.34e-32!41;UBERON:0001890!1.34e-32!41;UBERON:0006240!1.34e-32!41;UBERON:0003080!9.21e-32!42;UBERON:0005743!7.37e-31!86;UBERON:0002020!2.91e-30!34;UBERON:0003528!2.91e-30!34;UBERON:0001017!1.90e-29!82;UBERON:0001049!4.00e-29!57;UBERON:0005068!4.00e-29!57;UBERON:0006241!4.00e-29!57;UBERON:0007135!4.00e-29!57;UBERON:0000955!4.47e-29!69;UBERON:0006238!4.47e-29!69;UBERON:0003056!4.81e-27!61;UBERON:0002616!8.17e-25!59;UBERON:0000200!1.88e-24!6;UBERON:0003075!6.50e-23!86;UBERON:0007284!6.50e-23!86;UBERON:0007023!1.98e-22!115;UBERON:0002346!1.01e-21!90;UBERON:0000033!2.93e-20!123;UBERON:0000153!4.11e-19!129;UBERON:0007811!4.11e-19!129;UBERON:0002771!2.67e-18!3;UBERON:0004121!4.60e-18!169;UBERON:0000924!1.56e-17!173;UBERON:0006601!1.56e-17!173;UBERON:0005162!6.71e-13!2;UBERON:0000122!6.71e-13!2;UBERON:0001871!5.09e-12!7;UBERON:0001872!2.29e-11!5;UBERON:0002021!2.84e-11!5;UBERON:0000941!9.91e-08!1;UBERON:0004904!9.91e-08!1;UBERON:0002464!9.91e-08!1;UBERON:0001021!9.91e-08!1;UBERON:0001785!9.91e-08!1;UBERON:0001882!1.44e-07!1;UBERON:0005403!1.44e-07!1;UBERON:0007190!1.85e-07!1;UBERON:0003112!3.62e-07!1;UBERON:0000032!3.62e-07!1;UBERON:0005253!3.62e-07!1;UBERON:0003128!3.62e-07!1;UBERON:0002241!3.62e-07!1;UBERON:0001703!3.62e-07!1;UBERON:0004761!3.62e-07!1;UBERON:0009617!3.62e-07!1;UBERON:0004913!3.85e-07!1;UBERON:0003703!3.85e-07!1;UBERON:0001174!3.85e-07!1;UBERON:0004914!3.85e-07!1;UBERON:0002902!4.08e-07!1;UBERON:0009899!4.08e-07!1;UBERON:0002581!4.60e-07!1;UBERON:0002022!5.50e-07!1;UBERON:0000025!6.08e-07!194;UBERON:0002336!7.40e-07!1;UBERON:0001018!7.40e-07!1;UBERON:0002473!7.40e-07!1;UBERON:0005340!7.40e-07!1;UBERON:0002316!7.40e-07!1;UBERON:0003544!7.40e-07!1;UBERON:0001020!7.40e-07!1;UBERON:0005970!7.40e-07!1;UBERON:0002437!7.40e-07!1 | |ontology_enrichment_uberon=UBERON:0002619!1.04e-40!22;UBERON:0001893!8.75e-40!34;UBERON:0001950!6.62e-38!20;UBERON:0001869!2.76e-37!32;UBERON:0002791!7.69e-36!33;UBERON:0000956!1.02e-35!25;UBERON:0000203!1.02e-35!25;UBERON:0000073!3.74e-33!94;UBERON:0001016!3.74e-33!94;UBERON:0002780!1.34e-32!41;UBERON:0001890!1.34e-32!41;UBERON:0006240!1.34e-32!41;UBERON:0003080!9.21e-32!42;UBERON:0005743!7.37e-31!86;UBERON:0002020!2.91e-30!34;UBERON:0003528!2.91e-30!34;UBERON:0001017!1.90e-29!82;UBERON:0001049!4.00e-29!57;UBERON:0005068!4.00e-29!57;UBERON:0006241!4.00e-29!57;UBERON:0007135!4.00e-29!57;UBERON:0000955!4.47e-29!69;UBERON:0006238!4.47e-29!69;UBERON:0003056!4.81e-27!61;UBERON:0002616!8.17e-25!59;UBERON:0000200!1.88e-24!6;UBERON:0003075!6.50e-23!86;UBERON:0007284!6.50e-23!86;UBERON:0007023!1.98e-22!115;UBERON:0002346!1.01e-21!90;UBERON:0000033!2.93e-20!123;UBERON:0000153!4.11e-19!129;UBERON:0007811!4.11e-19!129;UBERON:0002771!2.67e-18!3;UBERON:0004121!4.60e-18!169;UBERON:0000924!1.56e-17!173;UBERON:0006601!1.56e-17!173;UBERON:0005162!6.71e-13!2;UBERON:0000122!6.71e-13!2;UBERON:0001871!5.09e-12!7;UBERON:0001872!2.29e-11!5;UBERON:0002021!2.84e-11!5;UBERON:0000941!9.91e-08!1;UBERON:0004904!9.91e-08!1;UBERON:0002464!9.91e-08!1;UBERON:0001021!9.91e-08!1;UBERON:0001785!9.91e-08!1;UBERON:0001882!1.44e-07!1;UBERON:0005403!1.44e-07!1;UBERON:0007190!1.85e-07!1;UBERON:0003112!3.62e-07!1;UBERON:0000032!3.62e-07!1;UBERON:0005253!3.62e-07!1;UBERON:0003128!3.62e-07!1;UBERON:0002241!3.62e-07!1;UBERON:0001703!3.62e-07!1;UBERON:0004761!3.62e-07!1;UBERON:0009617!3.62e-07!1;UBERON:0004913!3.85e-07!1;UBERON:0003703!3.85e-07!1;UBERON:0001174!3.85e-07!1;UBERON:0004914!3.85e-07!1;UBERON:0002902!4.08e-07!1;UBERON:0009899!4.08e-07!1;UBERON:0002581!4.60e-07!1;UBERON:0002022!5.50e-07!1;UBERON:0000025!6.08e-07!194;UBERON:0002336!7.40e-07!1;UBERON:0001018!7.40e-07!1;UBERON:0002473!7.40e-07!1;UBERON:0005340!7.40e-07!1;UBERON:0002316!7.40e-07!1;UBERON:0003544!7.40e-07!1;UBERON:0001020!7.40e-07!1;UBERON:0005970!7.40e-07!1;UBERON:0002437!7.40e-07!1 | ||
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|short_description=p5@DSCAML1 | |short_description=p5@DSCAML1 | ||
}} | }} |
Latest revision as of 21:54, 15 September 2015
Short description: | p5@DSCAML1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_DSCAML1_5end |
Coexpression cluster: | C41_retina_eye_medulla_Retinal_medulloblastoma_kidney_pineal |
Association with transcript: | -272bp_to_ENST00000321322, NM_020693, uc001prh.1_5end |
EntrezGene: | DSCAML1 |
HGNC: | 14656 |
UniProt: | Q8TD84 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 1.23e-66 | 1 |
cranial nerve | 1.23e-66 | 1 |
nerve trunk | 1.23e-66 | 1 |
nerve connecting eye with brain | 1.23e-66 | 1 |
nerve | 1.23e-66 | 1 |
retinal neural layer | 1.23e-66 | 1 |
presumptive neural retina | 1.23e-66 | 1 |
retina | 1.22e-44 | 6 |
photoreceptor array | 1.22e-44 | 6 |
posterior segment of eyeball | 1.22e-44 | 6 |
neural tissue | 3.61e-34 | 2 |
multi cell component structure | 3.61e-34 | 2 |
neuron projection bundle | 3.61e-34 | 2 |
eye | 3.84e-29 | 21 |
visual system | 3.84e-29 | 21 |
sense organ | 1.16e-25 | 24 |
sensory system | 1.16e-25 | 24 |
entire sense organ system | 1.16e-25 | 24 |
layer of retina | 7.35e-18 | 4 |
camera-type eye | 2.58e-14 | 20 |
simple eye | 2.58e-14 | 20 |
immature eye | 2.58e-14 | 20 |
ocular region | 2.58e-14 | 20 |
eyeball of camera-type eye | 2.58e-14 | 20 |
optic cup | 2.58e-14 | 20 |
optic vesicle | 2.58e-14 | 20 |
eye primordium | 2.58e-14 | 20 |
face | 4.01e-13 | 22 |
ectodermal placode | 1.20e-09 | 31 |
peripheral nervous system | 1.04e-08 | 8 |