FFCP PHASE1:Hg19::chr15:49715431..49715448,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2252 | |EntrezGene=2252 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3685 | |HGNC=3685 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000560270_5end | |association_with_transcript=0bp_to_ENST00000560270_5end | ||
|cluster_id=chr15:49715431..49715448,+ | |||
|coexpression_cluster_id=C1741 | |coexpression_cluster_id=C1741 | ||
|description=CAGE_peak_2_at_FGF7_5end | |description=CAGE_peak_2_at_FGF7_5end | ||
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|ontology_enrichment_celltype=CL:0000055!2.24e-24!180;CL:0000057!1.63e-18!75;CL:0000680!5.19e-15!57;CL:0000056!5.19e-15!57;CL:0000355!5.19e-15!57;CL:0000187!3.59e-14!54;CL:0000183!6.60e-13!59;CL:0000393!9.17e-12!60;CL:0000211!9.17e-12!60;CL:0002620!1.08e-10!23;CL:0000192!1.76e-10!42;CL:0000514!1.76e-10!42;CL:0000136!1.80e-09!15;CL:0002334!2.05e-08!12;CL:0000359!8.48e-07!32 | |ontology_enrichment_celltype=CL:0000055!2.24e-24!180;CL:0000057!1.63e-18!75;CL:0000680!5.19e-15!57;CL:0000056!5.19e-15!57;CL:0000355!5.19e-15!57;CL:0000187!3.59e-14!54;CL:0000183!6.60e-13!59;CL:0000393!9.17e-12!60;CL:0000211!9.17e-12!60;CL:0002620!1.08e-10!23;CL:0000192!1.76e-10!42;CL:0000514!1.76e-10!42;CL:0000136!1.80e-09!15;CL:0002334!2.05e-08!12;CL:0000359!8.48e-07!32 | ||
|ontology_enrichment_celltype_v019=CL:0002620;4.25e-12;23!CL:0002334;2.38e-09;12!CL:0000136;3.95e-09;13!CL:0000187;1.74e-08;55!CL:0000723;3.07e-08;61!CL:0000192;4.09e-08;43!CL:0000057;7.63e-08;73!CL:0000134;8.21e-08;55!CL:0000048;9.92e-08;58!CL:0000393;4.19e-07;61!CL:0000211;4.19e-07;61!CL:0002320;5.97e-07;188 | |ontology_enrichment_celltype_v019=CL:0002620;4.25e-12;23!CL:0002334;2.38e-09;12!CL:0000136;3.95e-09;13!CL:0000187;1.74e-08;55!CL:0000723;3.07e-08;61!CL:0000192;4.09e-08;43!CL:0000057;7.63e-08;73!CL:0000134;8.21e-08;55!CL:0000048;9.92e-08;58!CL:0000393;4.19e-07;61!CL:0000211;4.19e-07;61!CL:0002320;5.97e-07;188 | ||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.98e-20,76;CL:0000680,8.01e-16,58;CL:0000056,8.01e-16,58;CL:0000355,8.01e-16,58;CL:0000187,7.08e-15,55;CL:0002620,4.63e-12,23;CL:0000393,7.17e-12,61;CL:0000211,7.17e-12,61;CL:0000192,9.46e-11,43;CL:0000514,9.46e-11,43;CL:0000136,1.52e-10,15;CL:0002334,2.40e-09,12;CL:0000048,5.55e-09,427;CL:0000723,1.61e-08,433;CL:0000034,8.53e-08,441;CL:0000359,8.55e-07,32 | |||
|ontology_enrichment_development_v019=CL:0000355;4.95e-09;58!CL:0000514;4.09e-08;43 | |ontology_enrichment_development_v019=CL:0000355;4.95e-09;58!CL:0000514;4.09e-08;43 | ||
|ontology_enrichment_disease=DOID:2394!6.44e-08!14 | |ontology_enrichment_disease=DOID:2394!6.44e-08!14 | ||
|ontology_enrichment_disease_v019=DOID:2394;6.36e-09;14 | |ontology_enrichment_disease_v019=DOID:2394;6.36e-09;14 | ||
|ontology_enrichment_disease_v019_2=DOID:2394,6.44e-09,14 | |||
|ontology_enrichment_uberon=UBERON:0000914!5.73e-20!83;UBERON:0002329!5.73e-20!83;UBERON:0003077!5.73e-20!83;UBERON:0003059!5.73e-20!83;UBERON:0007282!5.73e-20!83;UBERON:0009618!5.73e-20!83;UBERON:0007285!5.73e-20!83;UBERON:0004290!3.41e-18!70;UBERON:0002385!6.58e-17!63;UBERON:0001015!6.58e-17!63;UBERON:0000383!6.58e-17!63;UBERON:0001134!3.90e-16!61;UBERON:0002036!3.90e-16!61;UBERON:0003082!3.90e-16!61;UBERON:0000486!1.74e-14!82;UBERON:0000475!9.41e-13!365;UBERON:0003102!5.17e-12!95;UBERON:0005256!9.56e-12!143;UBERON:0002199!1.63e-11!45;UBERON:0002416!1.63e-11!45;UBERON:0002100!1.58e-10!216;UBERON:0002097!1.87e-09!40;UBERON:0007023!2.70e-09!115;UBERON:0001013!1.16e-08!14;UBERON:0007100!4.97e-08!27;UBERON:0000468!1.84e-07!659;UBERON:0000481!1.99e-07!347;UBERON:0000948!2.18e-07!24;UBERON:0005498!2.18e-07!24;UBERON:0004140!2.18e-07!24;UBERON:0009881!2.18e-07!24;UBERON:0004141!2.18e-07!24;UBERON:0003084!2.18e-07!24;UBERON:0007005!2.18e-07!24;UBERON:0004139!2.18e-07!24;UBERON:0004291!2.18e-07!24;UBERON:0001135!2.73e-07!15;UBERON:0004872!7.34e-07!84 | |ontology_enrichment_uberon=UBERON:0000914!5.73e-20!83;UBERON:0002329!5.73e-20!83;UBERON:0003077!5.73e-20!83;UBERON:0003059!5.73e-20!83;UBERON:0007282!5.73e-20!83;UBERON:0009618!5.73e-20!83;UBERON:0007285!5.73e-20!83;UBERON:0004290!3.41e-18!70;UBERON:0002385!6.58e-17!63;UBERON:0001015!6.58e-17!63;UBERON:0000383!6.58e-17!63;UBERON:0001134!3.90e-16!61;UBERON:0002036!3.90e-16!61;UBERON:0003082!3.90e-16!61;UBERON:0000486!1.74e-14!82;UBERON:0000475!9.41e-13!365;UBERON:0003102!5.17e-12!95;UBERON:0005256!9.56e-12!143;UBERON:0002199!1.63e-11!45;UBERON:0002416!1.63e-11!45;UBERON:0002100!1.58e-10!216;UBERON:0002097!1.87e-09!40;UBERON:0007023!2.70e-09!115;UBERON:0001013!1.16e-08!14;UBERON:0007100!4.97e-08!27;UBERON:0000468!1.84e-07!659;UBERON:0000481!1.99e-07!347;UBERON:0000948!2.18e-07!24;UBERON:0005498!2.18e-07!24;UBERON:0004140!2.18e-07!24;UBERON:0009881!2.18e-07!24;UBERON:0004141!2.18e-07!24;UBERON:0003084!2.18e-07!24;UBERON:0007005!2.18e-07!24;UBERON:0004139!2.18e-07!24;UBERON:0004291!2.18e-07!24;UBERON:0001135!2.73e-07!15;UBERON:0004872!7.34e-07!84 | ||
|ontology_enrichment_uberon_v019=UBERON:0002385;5.93e-13;31!UBERON:0001015;5.93e-13;31!UBERON:0000383;5.93e-13;31!UBERON:0001013;1.20e-09;14!UBERON:0002199;4.46e-08;46!UBERON:0002416;4.46e-08;46!UBERON:0001135;4.53e-08;15!UBERON:0002097;9.68e-08;41!UBERON:0007100;1.53e-07;25!UBERON:0002384;1.95e-07;198!UBERON:0004457;7.23e-07;9!UBERON:0000042;7.23e-07;9!UBERON:0000948;8.30e-07;22!UBERON:0001134;8.31e-07;16!UBERON:0002036;8.31e-07;16 | |ontology_enrichment_uberon_v019=UBERON:0002385;5.93e-13;31!UBERON:0001015;5.93e-13;31!UBERON:0000383;5.93e-13;31!UBERON:0001013;1.20e-09;14!UBERON:0002199;4.46e-08;46!UBERON:0002416;4.46e-08;46!UBERON:0001135;4.53e-08;15!UBERON:0002097;9.68e-08;41!UBERON:0007100;1.53e-07;25!UBERON:0002384;1.95e-07;198!UBERON:0004457;7.23e-07;9!UBERON:0000042;7.23e-07;9!UBERON:0000948;8.30e-07;22!UBERON:0001134;8.31e-07;16!UBERON:0002036;8.31e-07;16 | ||
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| ||
|short_description=p2@FGF7 | |short_description=p2@FGF7 | ||
}} | }} |
Latest revision as of 22:35, 17 September 2015
Short description: | p2@FGF7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_FGF7_5end |
Coexpression cluster: | C1741_Fibroblast_Synoviocyte_sacrococcigeal_Preadipocyte_tenocyte_Adipocyte_mesenchymal |
Association with transcript: | 0bp_to_ENST00000560270_5end |
EntrezGene: | FGF7 |
HGNC: | 3685 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.98e-20 | 76 |
muscle precursor cell | 8.01e-16 | 58 |
myoblast | 8.01e-16 | 58 |
multi-potent skeletal muscle stem cell | 8.01e-16 | 58 |
muscle cell | 7.08e-15 | 55 |
skin fibroblast | 4.63e-12 | 23 |
electrically responsive cell | 7.17e-12 | 61 |
electrically active cell | 7.17e-12 | 61 |
smooth muscle cell | 9.46e-11 | 43 |
smooth muscle myoblast | 9.46e-11 | 43 |
fat cell | 1.52e-10 | 15 |
preadipocyte | 2.40e-09 | 12 |
multi fate stem cell | 5.55e-09 | 427 |
somatic stem cell | 1.61e-08 | 433 |
stem cell | 8.53e-08 | 441 |
vascular associated smooth muscle cell | 8.55e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
somite | 1.98e-19 | 71 |
presomitic mesoderm | 1.98e-19 | 71 |
presumptive segmental plate | 1.98e-19 | 71 |
dermomyotome | 1.98e-19 | 71 |
trunk paraxial mesoderm | 1.98e-19 | 71 |
dense mesenchyme tissue | 5.63e-19 | 73 |
paraxial mesoderm | 7.37e-19 | 72 |
presumptive paraxial mesoderm | 7.37e-19 | 72 |
muscle tissue | 5.91e-18 | 64 |
musculature | 5.91e-18 | 64 |
musculature of body | 5.91e-18 | 64 |
skeletal muscle tissue | 4.33e-17 | 62 |
striated muscle tissue | 4.33e-17 | 62 |
myotome | 4.33e-17 | 62 |
epithelial vesicle | 8.55e-16 | 78 |
multilaminar epithelium | 9.99e-16 | 83 |
surface structure | 7.24e-13 | 99 |
trunk mesenchyme | 1.35e-12 | 122 |
integument | 1.92e-12 | 46 |
integumental system | 1.92e-12 | 46 |
mesenchyme | 2.25e-10 | 160 |
entire embryonic mesenchyme | 2.25e-10 | 160 |
skin of body | 3.85e-10 | 41 |
trunk | 9.90e-10 | 199 |
adipose tissue | 1.26e-09 | 14 |
smooth muscle tissue | 4.52e-08 | 15 |
mesoderm | 9.14e-08 | 315 |
mesoderm-derived structure | 9.14e-08 | 315 |
presumptive mesoderm | 9.14e-08 | 315 |
primary circulatory organ | 2.27e-07 | 27 |
unilaminar epithelium | 6.72e-07 | 148 |
systemic artery | 9.76e-07 | 33 |
systemic arterial system | 9.76e-07 | 33 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 6.44e-09 | 14 |