FFCP PHASE1:Hg19::chr8:65492520..65492554,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=27319 | |EntrezGene=27319 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11963 | |HGNC=11963 | ||
|TSSclassifier=strong | |||
|UniProt=B4DF88,Q8NFJ8 | |UniProt=B4DF88,Q8NFJ8 | ||
|association_with_transcript=-240bp_to_NM_152414_5end | |association_with_transcript=-240bp_to_NM_152414_5end | ||
|cluster_id=chr8:65492520..65492554,+ | |||
|coexpression_cluster_id=C10 | |coexpression_cluster_id=C10 | ||
|description=CAGE_peak_3_at_BHLHE22_5end | |description=CAGE_peak_3_at_BHLHE22_5end | ||
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|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000540;2.35e-10;6!CL:0000404;2.35e-10;6!CL:0000860;8.28e-08;33!CL:0002057;8.28e-08;33 | |ontology_enrichment_celltype_v019=CL:0000540;2.35e-10;6!CL:0000404;2.35e-10;6!CL:0000860;8.28e-08;33!CL:0002057;8.28e-08;33 | ||
|ontology_enrichment_celltype_v019_2=CL:0000047,5.36e-13,8;CL:0000540,2.32e-10,6;CL:0000031,2.32e-10,6;CL:0000404,2.32e-10,6 | |||
|ontology_enrichment_development_v019=CL:0000031;2.35e-10;6!UBERON:0006215;3.54e-09;3!UBERON:0001045;2.31e-07;1 | |ontology_enrichment_development_v019=CL:0000031;2.35e-10;6!UBERON:0006215;3.54e-09;3!UBERON:0001045;2.31e-07;1 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!3.57e-30!94;UBERON:0001016!3.57e-30!94;UBERON:0001017!4.21e-30!82;UBERON:0005743!9.35e-30!86;UBERON:0007023!4.99e-29!115;UBERON:0001049!9.33e-29!57;UBERON:0005068!9.33e-29!57;UBERON:0006241!9.33e-29!57;UBERON:0007135!9.33e-29!57;UBERON:0002619!1.24e-28!22;UBERON:0002616!1.25e-25!59;UBERON:0001950!2.66e-25!20;UBERON:0000955!5.72e-25!69;UBERON:0006238!5.72e-25!69;UBERON:0001893!1.27e-24!34;UBERON:0000956!1.40e-24!25;UBERON:0000203!1.40e-24!25;UBERON:0002020!1.87e-24!34;UBERON:0003528!1.87e-24!34;UBERON:0001869!2.36e-24!32;UBERON:0003080!3.79e-24!42;UBERON:0002791!2.83e-23!33;UBERON:0002780!7.89e-23!41;UBERON:0001890!7.89e-23!41;UBERON:0006240!7.89e-23!41;UBERON:0002346!3.89e-20!90;UBERON:0000924!2.46e-18!173;UBERON:0006601!2.46e-18!173;UBERON:0003075!6.60e-18!86;UBERON:0007284!6.60e-18!86;UBERON:0004121!1.66e-16!169;UBERON:0003056!1.41e-15!61;UBERON:0000033!5.54e-12!123;UBERON:0000153!6.04e-11!129;UBERON:0007811!6.04e-11!129;UBERON:0002021!1.77e-10!5;UBERON:0001872!4.52e-09!5;UBERON:0001871!4.00e-08!7;UBERON:0000200!1.80e-07!6 | |ontology_enrichment_uberon=UBERON:0000073!3.57e-30!94;UBERON:0001016!3.57e-30!94;UBERON:0001017!4.21e-30!82;UBERON:0005743!9.35e-30!86;UBERON:0007023!4.99e-29!115;UBERON:0001049!9.33e-29!57;UBERON:0005068!9.33e-29!57;UBERON:0006241!9.33e-29!57;UBERON:0007135!9.33e-29!57;UBERON:0002619!1.24e-28!22;UBERON:0002616!1.25e-25!59;UBERON:0001950!2.66e-25!20;UBERON:0000955!5.72e-25!69;UBERON:0006238!5.72e-25!69;UBERON:0001893!1.27e-24!34;UBERON:0000956!1.40e-24!25;UBERON:0000203!1.40e-24!25;UBERON:0002020!1.87e-24!34;UBERON:0003528!1.87e-24!34;UBERON:0001869!2.36e-24!32;UBERON:0003080!3.79e-24!42;UBERON:0002791!2.83e-23!33;UBERON:0002780!7.89e-23!41;UBERON:0001890!7.89e-23!41;UBERON:0006240!7.89e-23!41;UBERON:0002346!3.89e-20!90;UBERON:0000924!2.46e-18!173;UBERON:0006601!2.46e-18!173;UBERON:0003075!6.60e-18!86;UBERON:0007284!6.60e-18!86;UBERON:0004121!1.66e-16!169;UBERON:0003056!1.41e-15!61;UBERON:0000033!5.54e-12!123;UBERON:0000153!6.04e-11!129;UBERON:0007811!6.04e-11!129;UBERON:0002021!1.77e-10!5;UBERON:0001872!4.52e-09!5;UBERON:0001871!4.00e-08!7;UBERON:0000200!1.80e-07!6 | ||
|ontology_enrichment_uberon_v019=UBERON:0002021;1.82e-20;5!UBERON:0002619;1.25e-16;22!UBERON:0000956;1.41e-14;25!UBERON:0000203;1.41e-14;25!UBERON:0001950;4.04e-14;20!UBERON:0002791;8.48e-11;32!UBERON:0001869;8.52e-11;32!UBERON:0001893;3.89e-09;34!UBERON:0003528;1.64e-08;34!UBERON:0002020;1.64e-08;34!UBERON:0002780;4.56e-08;41!UBERON:0001890;4.56e-08;41!UBERON:0002902;2.31e-07;1!UBERON:0000029;2.31e-07;1!UBERON:0001154;2.31e-07;1!UBERON:0001153;2.31e-07;1!UBERON:0009854;2.31e-07;1!UBERON:0009899;2.31e-07;1!UBERON:0001016;8.79e-07;83 | |ontology_enrichment_uberon_v019=UBERON:0002021;1.82e-20;5!UBERON:0002619;1.25e-16;22!UBERON:0000956;1.41e-14;25!UBERON:0000203;1.41e-14;25!UBERON:0001950;4.04e-14;20!UBERON:0002791;8.48e-11;32!UBERON:0001869;8.52e-11;32!UBERON:0001893;3.89e-09;34!UBERON:0003528;1.64e-08;34!UBERON:0002020;1.64e-08;34!UBERON:0002780;4.56e-08;41!UBERON:0001890;4.56e-08;41!UBERON:0002902;2.31e-07;1!UBERON:0000029;2.31e-07;1!UBERON:0001154;2.31e-07;1!UBERON:0001153;2.31e-07;1!UBERON:0009854;2.31e-07;1!UBERON:0009899;2.31e-07;1!UBERON:0001016;8.79e-07;83 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,1.83e-20,5;UBERON:0002619,1.25e-16,22;UBERON:0000956,1.41e-14,25;UBERON:0000203,1.41e-14,25;UBERON:0001016,2.04e-14,89;UBERON:0001017,3.58e-14,81;UBERON:0001950,4.21e-14,20;UBERON:0002791,3.09e-11,32;UBERON:0001869,3.09e-11,32;UBERON:0003528,1.58e-10,34;UBERON:0002020,1.58e-10,34;UBERON:0001893,1.58e-10,34;UBERON:0000073,5.44e-10,53;UBERON:0002616,5.44e-10,53;UBERON:0001049,2.25e-09,56;UBERON:0005068,2.25e-09,56;UBERON:0006241,2.25e-09,56;UBERON:0007135,2.25e-09,56;UBERON:0000955,5.71e-09,68;UBERON:0006238,5.71e-09,68;UBERON:0002780,1.41e-08,41;UBERON:0001890,1.41e-08,41;UBERON:0003080,1.41e-08,41;UBERON:0006240,1.41e-08,41;UBERON:0000029,1.69e-07,1;UBERON:0002902,2.17e-07,1;UBERON:0009899,2.17e-07,1;UBERON:0001154,2.80e-07,1;UBERON:0001153,2.80e-07,1;UBERON:0001045,2.80e-07,1;UBERON:0004121,4.55e-07,171;UBERON:0000924,4.55e-07,171;UBERON:0006601,4.55e-07,171 | |||
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| ||
|short_description=p3@BHLHE22 | |short_description=p3@BHLHE22 | ||
}} | }} |
Latest revision as of 19:20, 18 September 2015
Short description: | p3@BHLHE22 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_BHLHE22_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | -240bp_to_NM_152414_5end |
EntrezGene: | BHLHE22 |
HGNC: | 11963 |
UniProt: | B4DF88Q8NFJ8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 5.36e-13 | 8 |
neuron | 2.32e-10 | 6 |
neuroblast | 2.32e-10 | 6 |
electrically signaling cell | 2.32e-10 | 6 |
Ontology term | p-value | n |
---|---|---|
occipital lobe | 1.83e-20 | 5 |
regional part of cerebral cortex | 1.25e-16 | 22 |
cerebral cortex | 1.41e-14 | 25 |
pallium | 1.41e-14 | 25 |
nervous system | 2.04e-14 | 89 |
central nervous system | 3.58e-14 | 81 |
neocortex | 4.21e-14 | 20 |
regional part of telencephalon | 3.09e-11 | 32 |
cerebral hemisphere | 3.09e-11 | 32 |
brain grey matter | 1.58e-10 | 34 |
gray matter | 1.58e-10 | 34 |
telencephalon | 1.58e-10 | 34 |
regional part of nervous system | 5.44e-10 | 53 |
regional part of brain | 5.44e-10 | 53 |
neural tube | 2.25e-09 | 56 |
neural rod | 2.25e-09 | 56 |
future spinal cord | 2.25e-09 | 56 |
neural keel | 2.25e-09 | 56 |
brain | 5.71e-09 | 68 |
future brain | 5.71e-09 | 68 |
regional part of forebrain | 1.41e-08 | 41 |
forebrain | 1.41e-08 | 41 |
anterior neural tube | 1.41e-08 | 41 |
future forebrain | 1.41e-08 | 41 |
lymph node | 1.69e-07 | 1 |
occipital pole | 2.17e-07 | 1 |
pole of cerebral hemisphere | 2.17e-07 | 1 |
vermiform appendix | 2.80e-07 | 1 |
caecum | 2.80e-07 | 1 |
midgut | 2.80e-07 | 1 |
ectoderm-derived structure | 4.55e-07 | 171 |
ectoderm | 4.55e-07 | 171 |
presumptive ectoderm | 4.55e-07 | 171 |