FFCP PHASE1:Mm9::chr10:77815068..77815204,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=28169 | |EntrezGene=28169 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=346 | |MCL_coexpression_id=346 | ||
|TSSclassifier=NA | |||
|UniProt=Q9D517 | |UniProt=Q9D517 | ||
|association_with_transcript=0bp_to_ENSMUST00000001240,uc007fxr.1_5end | |association_with_transcript=0bp_to_ENSMUST00000001240,uc007fxr.1_5end | ||
|cluster_id=chr10:77815068..77815204,- | |||
|description=CAGE_peak_1_at_Agpat3_5end | |description=CAGE_peak_1_at_Agpat3_5end | ||
|id=chr10:77815068..77815204,- | |id=chr10:77815068..77815204,- | ||
|ontology_enrichment_celltype=CL:0002321!7.95e-08!70;CL:0000220!7.95e-08!70 | |ontology_enrichment_celltype=CL:0002321!7.95e-08!70;CL:0000220!7.95e-08!70 | ||
|ontology_enrichment_celltype_v019_2=CL:0002321,7.94e-08,70 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!6.50e-12!75;UBERON:0001016!6.50e-12!75;UBERON:0001017!1.31e-11!73;UBERON:0005743!1.31e-11!73;UBERON:0001049!1.76e-10!52;UBERON:0005068!1.76e-10!52;UBERON:0006241!1.76e-10!52;UBERON:0007135!1.76e-10!52;UBERON:0000955!4.26e-10!50;UBERON:0006238!4.26e-10!50;UBERON:0004111!4.36e-10!122;UBERON:0002616!9.82e-10!49;UBERON:0004121!1.68e-09!102;UBERON:0000924!1.68e-09!102;UBERON:0006601!1.68e-09!102;UBERON:0000025!2.19e-09!114;UBERON:0000033!9.62e-09!63;UBERON:0002346!7.49e-08!71;UBERON:0003075!7.49e-08!71;UBERON:0007284!7.49e-08!71;UBERON:0002020!1.10e-07!34 | |ontology_enrichment_uberon=UBERON:0000073!6.50e-12!75;UBERON:0001016!6.50e-12!75;UBERON:0001017!1.31e-11!73;UBERON:0005743!1.31e-11!73;UBERON:0001049!1.76e-10!52;UBERON:0005068!1.76e-10!52;UBERON:0006241!1.76e-10!52;UBERON:0007135!1.76e-10!52;UBERON:0000955!4.26e-10!50;UBERON:0006238!4.26e-10!50;UBERON:0004111!4.36e-10!122;UBERON:0002616!9.82e-10!49;UBERON:0004121!1.68e-09!102;UBERON:0000924!1.68e-09!102;UBERON:0006601!1.68e-09!102;UBERON:0000025!2.19e-09!114;UBERON:0000033!9.62e-09!63;UBERON:0002346!7.49e-08!71;UBERON:0003075!7.49e-08!71;UBERON:0007284!7.49e-08!71;UBERON:0002020!1.10e-07!34 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,6.50e-12,75;UBERON:0001017,1.31e-11,73;UBERON:0000073,1.83e-11,54;UBERON:0001049,1.76e-10,52;UBERON:0005068,1.76e-10,52;UBERON:0006241,1.76e-10,52;UBERON:0007135,1.76e-10,52;UBERON:0004111,4.36e-10,122;UBERON:0004121,5.31e-10,95;UBERON:0000924,5.31e-10,95;UBERON:0006601,5.31e-10,95;UBERON:0000025,2.19e-09,114;UBERON:0000955,1.23e-08,47;UBERON:0006238,1.23e-08,47;UBERON:0002346,1.64e-08,64;UBERON:0003075,1.64e-08,64;UBERON:0007284,1.64e-08,64;UBERON:0002616,2.73e-08,46;UBERON:0002020,1.10e-07,34;UBERON:0010371,3.76e-07,73 | |||
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|phase1_expression=28.3463459375485,123.886269711973,119.209800720058,191.76230996853,237.424575994569,43.6486106970913,34.1074455269467,13.1705789910408,6.05391505252167,6.08567768437183,11.8140398075598,9.89174771542172,11.1280474455284,8.65461983948074,25.9825614216217,15.9955461237963,29.3815988813822,8.3597473819933,11.1062691220648,10.6097412949508,113.277662481225,0.595745707205312,0.783599367416806,27.8386815660528,27.2997044469932,95.3225060430934,71.9372533585655,59.6855314539913,19.1923653650938,27.2192540140725,26.6076612786366,10.7955214488137,12.916360539276,15.8481681015439,24.8412392986096,23.2728503501889,27.9712018079446,0,0,0.523523743973798,0,1.36609096991689,0,40.5387753881359,45.9237498424401,50.1082633401391,90.7573959443725,137.355848519681,153.78032791413,140.378387131633,75.8726405209465,106.376897630079,8.22134769682908,18.859415692295,16.1325023588383,47.8502551026861,48.1376179097111,49.5045208586345,32.168317276676,21.6886301501533,34.2268957893337,42.0167219765724,64.029225320002,93.1396207386248,78.120442642791,113.676818391376,176.764065205859,298.921841540169,26.4408511386618,31.7263955079473,29.0248446664907,141.96853924869,97.4030265596616,29.397791811589,26.0699681169603,31.2534387447407,120.026310289334,125.388965999654,104.606049147502,38.115137154026,36.7780327281687,32.2966289745191,126.469898547626,83.2888662846886,95.9572996038367,81.0228610052586,69.0502651875649,41.567076419042,38.7718109865902,56.6030985199824,28.9864488701678,99.8091697298408,118.994983398856,123.052327693422,126.706401402295,114.694883096918,71.9075431074569,34.4269251607677,27.5373164879041,34.9806178765237,42.6755561923342,23.0987659345772,35.6727335589304,106.660005473,29.4427815775251,24.3225470856095,20.2209778005913,99.2257914758631,18.9024655062435,48.3921373351329,22.2061218260654,22.8349108734106,33.9004780966406,25.7735715344985,32.9248379979973,72.3839566058931,52.1581381919529,107.437322191494,18.5768215909474,43.0299820860108,30.6969710659947,17.9403843660032,27.9587641827183,89.2981430885219,112.891774972452,43.9386134958777,0.958520996047362,0,0.635351135365324,102.456797352899,83.26510971299,47.1203820423242,87.9551060172919,93.591857382901,92.4656798290042,88.0970058457924,30.7554878827955,29.2356380933719,67.9824220186585,70.0771380101958,14.8337304977482,21.6107978167465,21.0672691872259,26.0719334855787,38.4406220205002,34.2063633160549,43.9461088185128,56.9147415625834,10.3472636607764,18.3432897762785,20.9381837755099,24.3307262994608,18.6291656981151,27.8601733217733,23.2533814140976,12.7381930763836,0,0,0,19.0555710732662,11.7263029990548,14.0448407939592,20.8335367314985,15.9379027715397,18.0492522078233,22.78832658554,29.2418007525585,34.7960720254165,37.8487654801005,41.0418660197738,59.4234373971123,55.4097952342009,51.813827208688,56.5009022981165,68.5545232319055,50.3203554534701,71.7008759074842,57.6502235326527,9.17139477301506,12.3085436086032,18.0414445850931,24.2020229548011,30.0210359190575,41.2789608664253,73.0774754778548,79.2201972222492,71.8818697168771,78.9857194003369,79.7403116317201,80.8937467788799,48.1987851220568,75.2754012901508,20.2944654019797,19.8792411940928,25.9227792048085,34.0097717501675,30.6444929724849,49.7262963022359,61.4659140847781,92.1087323392717,82.8953283002459,113.278596480213,99.9045353283692,8.3422552858047,11.4004217165658,9.89393294493356,15.4173692255262,23.153007336232,26.4810885852677,31.3588789821384,54.3153009696369,40.9096505650241,46.0058260887535,77.0331761673802,72.7047778356926,100.778972300898,97.5921929559202,108.549792306758,38.0591571743206,14.2118558827864,16.9483575499707,14.428332290891,19.4792906079457,25.2934448737142,36.4206770555601,52.1006839780323,33.1033802623001,28.568944964692,45.4446090673838,35.5583392933151,43.5166154302057,40.6463854614048,15.0791283939272,43.5124547054968,16.7199852826472,26.2139908989496,99.8624669724066,106.545423112313,23.1148272981112,54.5337202761446,31.8663301610419,21.8645696806118,31.4518160689886,35.3673820969777,32.9742037641943,37.0830255333371,31.5752347306418,29.8100975069538,28.4607200121497,82.2582570039826,36.6205419837333,28.1343653794263,26.2248004559257,32.4991142255895,58.4078608695836,22.5785991624133,29.3253850255809,28.8565772026524,35.4362271456927,35.3550420135517,54.7867981516629,37.0804404067056,36.0062352168569,43.9291093530784,41.1132573442495,44.3482835967203,38.1292358444243,17.1058039329745,27.2946822781612,31.9362182197073,30.3251799528288,37.4574516964348,29.947921749586,37.1447237919811,20.6511103096065,34.9522916925303,46.090435193487,28.0306630000516,32.9387430459647,32.9308570107731,27.097522088712,34.4695889464629,74.3276133406119,130.353987313388,19.9918930533488,19.6067524565061,12.7784223885101,16.9531611304222,15.0363650493128,19.2173665493479,10.538662659619,6.57771825921193,10.9177979305495,36.2774834845743,12.3371037496643,22.5684608510802,16.6328224865574,14.0089158329694,19.8709933009022,25.8939545058856,41.6573416855693,36.12231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| ||
|short_description=p1@Agpat3 | |short_description=p1@Agpat3 | ||
}} | }} |
Latest revision as of 08:31, 26 September 2015
Short description: | p1@Agpat3 |
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Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Agpat3_5end |
Coexpression cluster: | MCL_coexpression_mm9:346 |
Association with transcript: | 0bp_to_ENSMUST00000001240, uc007fxr.1_5end |
EntrezGene: | Agpat3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 7.94e-08 | 70 |
Ontology term | p-value | n |
---|---|---|
nervous system | 6.50e-12 | 75 |
central nervous system | 1.31e-11 | 73 |
regional part of nervous system | 1.83e-11 | 54 |
neural tube | 1.76e-10 | 52 |
neural rod | 1.76e-10 | 52 |
future spinal cord | 1.76e-10 | 52 |
neural keel | 1.76e-10 | 52 |
anatomical conduit | 4.36e-10 | 122 |
ectoderm-derived structure | 5.31e-10 | 95 |
ectoderm | 5.31e-10 | 95 |
presumptive ectoderm | 5.31e-10 | 95 |
tube | 2.19e-09 | 114 |
brain | 1.23e-08 | 47 |
future brain | 1.23e-08 | 47 |
neurectoderm | 1.64e-08 | 64 |
neural plate | 1.64e-08 | 64 |
presumptive neural plate | 1.64e-08 | 64 |
regional part of brain | 2.73e-08 | 46 |
gray matter | 1.10e-07 | 34 |
ecto-epithelium | 3.76e-07 | 73 |