FFCP PHASE1:Mm9::chr2:116946787..116946885,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=114715 | |EntrezGene=114715 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=361 | |MCL_coexpression_id=361 | ||
|TSSclassifier=NA | |||
|UniProt=Q924S8 | |UniProt=Q924S8 | ||
|association_with_transcript=-224bp_to_ENSMUST00000028829_5end | |association_with_transcript=-224bp_to_ENSMUST00000028829_5end | ||
|cluster_id=chr2:116946787..116946885,+ | |||
|description=CAGE_peak_1_at_Spred1_5end | |description=CAGE_peak_1_at_Spred1_5end | ||
|id=chr2:116946787..116946885,+ | |id=chr2:116946787..116946885,+ | ||
|ontology_enrichment_celltype=CL:0000393!4.18e-07!39;CL:0000211!4.18e-07!39 | |ontology_enrichment_celltype=CL:0000393!4.18e-07!39;CL:0000211!4.18e-07!39 | ||
|ontology_enrichment_celltype_v019_2=CL:0000393,4.18e-07,39;CL:0000211,4.18e-07,39 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!3.16e-17!102;UBERON:0000924!3.16e-17!102;UBERON:0006601!3.16e-17!102;UBERON:0000073!1.26e-14!75;UBERON:0001016!1.26e-14!75;UBERON:0001017!5.24e-14!73;UBERON:0005743!5.24e-14!73;UBERON:0002346!6.70e-13!71;UBERON:0003075!6.70e-13!71;UBERON:0007284!6.70e-13!71;UBERON:0000033!1.33e-09!63;UBERON:0000955!5.81e-09!50;UBERON:0006238!5.81e-09!50;UBERON:0001049!1.01e-08!52;UBERON:0005068!1.01e-08!52;UBERON:0006241!1.01e-08!52;UBERON:0007135!1.01e-08!52;UBERON:0002616!1.74e-08!49;UBERON:0002020!1.18e-07!34;UBERON:0002021!1.36e-07!10;UBERON:0000411!1.36e-07!10;UBERON:0001950!1.36e-07!10;UBERON:0003056!3.27e-07!49;UBERON:0005157!4.42e-07!27 | |ontology_enrichment_uberon=UBERON:0004121!3.16e-17!102;UBERON:0000924!3.16e-17!102;UBERON:0006601!3.16e-17!102;UBERON:0000073!1.26e-14!75;UBERON:0001016!1.26e-14!75;UBERON:0001017!5.24e-14!73;UBERON:0005743!5.24e-14!73;UBERON:0002346!6.70e-13!71;UBERON:0003075!6.70e-13!71;UBERON:0007284!6.70e-13!71;UBERON:0000033!1.33e-09!63;UBERON:0000955!5.81e-09!50;UBERON:0006238!5.81e-09!50;UBERON:0001049!1.01e-08!52;UBERON:0005068!1.01e-08!52;UBERON:0006241!1.01e-08!52;UBERON:0007135!1.01e-08!52;UBERON:0002616!1.74e-08!49;UBERON:0002020!1.18e-07!34;UBERON:0002021!1.36e-07!10;UBERON:0000411!1.36e-07!10;UBERON:0001950!1.36e-07!10;UBERON:0003056!3.27e-07!49;UBERON:0005157!4.42e-07!27 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,6.90e-15,95;UBERON:0000924,6.90e-15,95;UBERON:0006601,6.90e-15,95;UBERON:0001016,1.26e-14,75;UBERON:0001017,5.24e-14,73;UBERON:0010371,6.99e-12,73;UBERON:0002346,8.25e-11,64;UBERON:0003075,8.25e-11,64;UBERON:0007284,8.25e-11,64;UBERON:0010314,1.00e-10,92;UBERON:0000073,1.51e-09,54;UBERON:0001049,1.01e-08,52;UBERON:0005068,1.01e-08,52;UBERON:0006241,1.01e-08,52;UBERON:0007135,1.01e-08,52;UBERON:0000955,1.06e-07,47;UBERON:0006238,1.06e-07,47;UBERON:0002020,1.18e-07,34;UBERON:0002021,1.36e-07,10;UBERON:0000411,1.36e-07,10;UBERON:0001950,1.36e-07,10;UBERON:0002616,2.99e-07,46;UBERON:0003056,3.27e-07,49 | |||
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| ||
|short_description=p1@Spred1 | |short_description=p1@Spred1 | ||
}} | }} |
Latest revision as of 00:24, 2 October 2015
Short description: | p1@Spred1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Spred1_5end |
Coexpression cluster: | MCL_coexpression_mm9:361 |
Association with transcript: | -224bp_to_ENSMUST00000028829_5end |
EntrezGene: | Spred1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
electrically responsive cell | 4.18e-07 | 39 |
electrically active cell | 4.18e-07 | 39 |
Ontology term | p-value | n |
---|---|---|
ectoderm-derived structure | 6.90e-15 | 95 |
ectoderm | 6.90e-15 | 95 |
presumptive ectoderm | 6.90e-15 | 95 |
nervous system | 1.26e-14 | 75 |
central nervous system | 5.24e-14 | 73 |
ecto-epithelium | 6.99e-12 | 73 |
neurectoderm | 8.25e-11 | 64 |
neural plate | 8.25e-11 | 64 |
presumptive neural plate | 8.25e-11 | 64 |
structure with developmental contribution from neural crest | 1.00e-10 | 92 |
regional part of nervous system | 1.51e-09 | 54 |
neural tube | 1.01e-08 | 52 |
neural rod | 1.01e-08 | 52 |
future spinal cord | 1.01e-08 | 52 |
neural keel | 1.01e-08 | 52 |
brain | 1.06e-07 | 47 |
future brain | 1.06e-07 | 47 |
gray matter | 1.18e-07 | 34 |
occipital lobe | 1.36e-07 | 10 |
visual cortex | 1.36e-07 | 10 |
neocortex | 1.36e-07 | 10 |
regional part of brain | 2.99e-07 | 46 |
pre-chordal neural plate | 3.27e-07 | 49 |