FFCP PHASE1:Mm9::chr8:36558541..36558599,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(3 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=67276 | |EntrezGene=67276 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1134 | |MCL_coexpression_id=1134 | ||
|TSSclassifier=NA | |||
|UniProt=Q7TMF2,Q8BV98 | |UniProt=Q7TMF2,Q8BV98 | ||
|association_with_transcript=0bp_to_ENSMUST00000033927,NM_026067,uc009lky.2_5end | |association_with_transcript=0bp_to_ENSMUST00000033927,NM_026067,uc009lky.2_5end | ||
|cluster_id=chr8:36558541..36558599,- | |||
|description=CAGE_peak_1_at_Eri1_5end | |description=CAGE_peak_1_at_Eri1_5end | ||
|id=chr8:36558541..36558599,- | |id=chr8:36558541..36558599,- | ||
|ontology_enrichment_celltype=CL:0000988!8.76e-09!32;CL:0002032!8.76e-09!32;CL:0000037!8.76e-09!32;CL:0000566!8.76e-09!32;CL:0000837!8.76e-09!32;CL:0000838!4.63e-07!12;CL:0000542!5.14e-07!13;CL:0000051!5.14e-07!13;CL:0000084!9.99e-07!11;CL:0000827!9.99e-07!11 | |ontology_enrichment_celltype=CL:0000988!8.76e-09!32;CL:0002032!8.76e-09!32;CL:0000037!8.76e-09!32;CL:0000566!8.76e-09!32;CL:0000837!8.76e-09!32;CL:0000838!4.63e-07!12;CL:0000542!5.14e-07!13;CL:0000051!5.14e-07!13;CL:0000084!9.99e-07!11;CL:0000827!9.99e-07!11 | ||
|ontology_enrichment_celltype_v019_2=CL:0000988,8.76e-09,32;CL:0002032,8.76e-09,32;CL:0000037,8.76e-09,32;CL:0000837,8.76e-09,32;CL:0000838,4.63e-07,12;CL:0000542,5.14e-07,13;CL:0000051,5.14e-07,13;CL:0000084,9.99e-07,11;CL:0000827,9.99e-07,11 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!2.26e-15!29;UBERON:0002390!1.62e-13!45;UBERON:0003061!1.62e-13!45;UBERON:0002193!5.99e-13!48;UBERON:0002370!3.29e-12!23;UBERON:0000974!3.29e-12!23;UBERON:0004807!3.29e-12!23;UBERON:0005058!3.29e-12!23;UBERON:0003351!3.29e-12!23;UBERON:0009113!3.29e-12!23;UBERON:0003295!3.29e-12!23;UBERON:0009722!3.29e-12!23;UBERON:0005562!3.29e-12!23;UBERON:0007690!3.29e-12!23;UBERON:0005057!3.16e-11!51;UBERON:0006562!3.24e-11!24;UBERON:0001557!3.24e-11!24;UBERON:0001042!3.24e-11!24;UBERON:0008814!3.24e-11!24;UBERON:0009145!3.24e-11!24;UBERON:0002405!5.05e-11!70;UBERON:0003408!5.81e-11!24;UBERON:0000072!3.61e-10!27;UBERON:0000065!2.82e-08!41;UBERON:0003929!1.01e-07!55;UBERON:0001004!1.30e-07!42;UBERON:0005911!2.77e-07!69 | |ontology_enrichment_uberon=UBERON:0004177!2.26e-15!29;UBERON:0002390!1.62e-13!45;UBERON:0003061!1.62e-13!45;UBERON:0002193!5.99e-13!48;UBERON:0002370!3.29e-12!23;UBERON:0000974!3.29e-12!23;UBERON:0004807!3.29e-12!23;UBERON:0005058!3.29e-12!23;UBERON:0003351!3.29e-12!23;UBERON:0009113!3.29e-12!23;UBERON:0003295!3.29e-12!23;UBERON:0009722!3.29e-12!23;UBERON:0005562!3.29e-12!23;UBERON:0007690!3.29e-12!23;UBERON:0005057!3.16e-11!51;UBERON:0006562!3.24e-11!24;UBERON:0001557!3.24e-11!24;UBERON:0001042!3.24e-11!24;UBERON:0008814!3.24e-11!24;UBERON:0009145!3.24e-11!24;UBERON:0002405!5.05e-11!70;UBERON:0003408!5.81e-11!24;UBERON:0000072!3.61e-10!27;UBERON:0000065!2.82e-08!41;UBERON:0003929!1.01e-07!55;UBERON:0001004!1.30e-07!42;UBERON:0005911!2.77e-07!69 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004177,2.26e-15,29;UBERON:0005057,2.26e-15,29;UBERON:0002390,1.62e-13,45;UBERON:0003061,1.62e-13,45;UBERON:0002193,5.99e-13,48;UBERON:0002405,5.99e-13,48;UBERON:0000077,1.59e-12,35;UBERON:0002370,3.29e-12,23;UBERON:0000974,3.29e-12,23;UBERON:0004807,3.29e-12,23;UBERON:0005058,3.29e-12,23;UBERON:0003351,3.29e-12,23;UBERON:0009113,3.29e-12,23;UBERON:0003295,3.29e-12,23;UBERON:0009722,3.29e-12,23;UBERON:0005562,3.29e-12,23;UBERON:0007690,3.29e-12,23;UBERON:0006562,3.24e-11,24;UBERON:0001557,3.24e-11,24;UBERON:0001042,3.24e-11,24;UBERON:0008814,3.24e-11,24;UBERON:0009145,3.24e-11,24;UBERON:0003408,5.81e-11,24;UBERON:0000072,3.61e-10,27;UBERON:0000065,2.82e-08,41;UBERON:0001041,3.23e-08,80;UBERON:0003929,1.01e-07,55;UBERON:0001004,1.30e-07,42;UBERON:0005911,2.77e-07,69;UBERON:0000153,8.91e-07,43 | |||
|phase1_expression=12.9720566154883,17.0997949743287,26.8449551239826,6.95667686005709,4.50806156951712,30.7219067598758,28.2671295120586,39.3826136496808,66.5930655777384,54.7710991593465,42.6332740881507,39.9658516566635,45.8817956215631,36.1920466014649,67.6212816485795,71.8787199233882,82.5483016191213,39.4327706697797,40.5858723472987,47.5316410013794,14.8825757764372,37.8298524075373,47.0159620450084,17.1191892388945,17.4351053611049,22.9692785646008,20.6765758156356,18.5305260109865,13.8717096203153,17.1380488236753,19.2905544270115,19.0509202037889,23.9875267157982,15.8481681015439,38.1284138071682,37.7352644963778,40.8338712524738,39.3419732892693,53.9121387721422,49.7347556775108,26.4704169613956,38.9335926426314,33.0147040061184,13.3450627054112,12.4693625400003,14.1330999164495,10.9534788208725,11.1192829754028,6.37089929929968,9.13820525649132,16.6583841734181,4.31257693094915,37.0799559387597,45.6978149467147,63.5217280379257,17.4936416504444,16.6189395164479,10.8291139378263,16.9945827122062,17.9856932952491,15.8457850876545,11.5207140903505,6.22506357277798,11.6986963246582,4.94433181283487,11.3676818391376,5.99200221036809,3.84218305321555,22.0858874217057,23.0860154547191,23.5563956713548,12.5686433137674,11.9269012113871,24.3756690437759,30.0954778997262,16.5459381589804,4.40463523997555,8.93811366596314,11.5204899942183,15.8263545276233,15.0039735507952,14.0646610050325,8.37548997004143,4.50210088025344,7.63991238884051,14.7314292736834,14.2371680799103,16.4031512326265,25.2168223799503,28.7171928405785,24.0587525622393,12.9063581547208,9.51959867190851,9.17495425784289,18.8435161059824,12.5447528387254,10.9546647702766,22.3263722577256,17.9252343175979,26.5004680882755,12.3942209403479,26.9485602570067,43.3168907501298,78.2173373468664,24.246996593256,23.8158273546593,16.1767822404731,16.0999270403875,43.5015644527248,17.3677302705845,24.287945747259,18.8768596553528,22.8309342283498,18.6896074285252,16.2272415847273,17.2163230121655,22.494742063828,12.2909453381925,52.1920225650426,27.1768307911647,37.9847411751877,38.7900202508178,24.2309289583559,12.8823550685081,11.3101221679266,15.3274233125155,51.5205035375457,50.9917321344397,45.7452817463033,9.43681028250383,12.3525162761029,19.9790419859454,11.298580812498,12.5300574091862,6.44142938134636,8.4365456795234,21.895463227818,30.2308938582526,12.3834151632501,13.0473950649614,21.079511759958,25.0593293832485,25.0286360429435,22.6057226753573,22.7241907165435,20.1138540847214,22.8632207925738,13.1938719076898,28.0238390812695,24.2055782614809,23.929352886297,23.4539433697505,24.7462051810782,26.1189124891625,25.9285491874009,23.2870092177637,63.1991868581911,50.6975377015989,37.5095819202182,22.3695834338342,18.0585066185444,17.4660199617184,22.9642393517654,20.46348010173,18.5120535464854,20.2304531932855,18.5108646965737,12.0268302638185,20.899100939012,16.7450813360677,13.4574223846121,10.8187990694746,16.2467085315377,12.3469905259542,10.9350773253346,18.8315440654091,9.91256348951394,12.9580777665137,25.8078783147633,27.4039272795317,27.8353716455722,20.9750865608276,21.3482922091076,13.5060194539917,19.9302205848695,13.6700132420929,13.8234364840148,17.3092130675801,17.7417319278399,17.9763881730844,15.1296634912286,14.9355954940775,24.4671592229475,30.5043528667976,19.1603150644237,26.4746726198908,21.1408211012712,19.6380295692892,19.4768534342712,16.3847264257358,12.4028994994686,10.8589504251184,13.3403682189217,49.5529963976799,40.0980350030934,45.8718709265102,45.8463874338017,35.2118653238529,30.300476361989,33.9481442191957,25.1309601501305,29.3780712111247,31.629005436018,21.2120340171047,16.8500343481863,19.9537313578218,21.3482922091076,15.4381926836277,18.2905658264939,28.4237117655727,37.1560146287819,30.0448801822083,26.5199980566007,29.983620082085,17.853273066451,22.6355031515047,23.4876364718225,17.717175171902,19.7723913135284,19.4997344511728,20.7221978239075,16.9239398540369,19.6028669121054,20.1245103012923,27.538799289066,24.2824336748165,8.83028244932856,11.0178985396671,26.8853310417748,11.8661335786055,22.7165917979705,21.4741309363151,22.8348801596767,22.2240982095873,18.7150886229211,32.8368775715046,27.5271277138928,21.3346776275258,23.7172666767914,7.71171159412337,18.5941511622832,20.2994788180671,26.2248004559257,18.476653772924,9.2921596837974,22.5785991624133,19.6510312027088,16.7858520982749,11.5167738223501,10.7602301780375,22.4832615056352,22.9026249570828,24.9548164869305,17.0659849285341,20.0295356292498,17.5330423521918,16.000661470428,25.7487364464774,13.5826617971892,19.9333442579381,22.1675292052842,18.5503570306153,16.1258040190079,8.52501857520878,24.6405293466896,22.6660315824288,9.70324951441832,34.2963406118279,25.5113794179531,30.3374012388624,32.4692775688531,37.588266041619,14.2825609948627,13.3506217447567,52.2864895241429,35.4985412896743,35.7425437823544,62.161590811548,66.7067831278603,50.1024199322285,33.3157722787956,40.3060182692135,40.0779924032829,15.2747298882418,25.3068794864908,29.0746837991394,25.1652444114797,24.0451540416639,19.652630737156,23.0618032318043,19.8368293740806,17.53764811293,18.146096260851,11.1841076355647,20.2929457926309,20.932316446157,20.6823113071372,25.2786544847262,20.5364119329592,20.7816034353657,19.3639443765494,22.9159717325352,22.5447590515278,20.7762343910365,13.5374102941197,65.0982908494047,25.1379266959804,24.3424968480641,35.5983054959158,59.9739430486063,49.8690200500975,53.6071704859061,57.8942946524343,67.9504208151034,65.2330264966799,50.2114401981466,55.1611604986999,58.8816470838816,51.6595907642535,14.7374749349887,32.4099491926134,47.1894885765842,42.1390387073837,13.7164611762855,20.2697073487277,20.5129819179337,23.7948900777763,11.034586288778,9.60078132449013,9.66682996665071,8.02053718815155,8.42080593484069,14.3867329151835,15.107877947794,8.77529250301348,12.158672487054,9.9691329976525,12.4262474820437,34.4573993979467,26.3356416444681,22.1953687480374,25.0399918580343,36.6823034598969,29.9664918773523,20.6689456855502,28.4328378989674,28.5618096536716,26.0278128116711,27.6292436880361,32.8209834011773,26.1259805840972,28.6832682773814,25.5013482162923,24.2909782554368,28.6234285083793,29.5151107309469,30.906442560248,28.7037894262075,31.8868404718436,26.2664193115819,27.8970342238365,23.6914659110695,32.4677362432891,29.8689565857618,27.2562679580431,27.0961802780978,25.2595651753303,23.567975409625,24.4388137335799,28.3692909241623,33.9661765830842,29.9028103488914,23.3416999287181,16.2376875659665,21.2877763685322,17.1896843238639,13.5814715768879,15.8825821766051,16.6944841646703 | |phase1_expression=12.9720566154883,17.0997949743287,26.8449551239826,6.95667686005709,4.50806156951712,30.7219067598758,28.2671295120586,39.3826136496808,66.5930655777384,54.7710991593465,42.6332740881507,39.9658516566635,45.8817956215631,36.1920466014649,67.6212816485795,71.8787199233882,82.5483016191213,39.4327706697797,40.5858723472987,47.5316410013794,14.8825757764372,37.8298524075373,47.0159620450084,17.1191892388945,17.4351053611049,22.9692785646008,20.6765758156356,18.5305260109865,13.8717096203153,17.1380488236753,19.2905544270115,19.0509202037889,23.9875267157982,15.8481681015439,38.1284138071682,37.7352644963778,40.8338712524738,39.3419732892693,53.9121387721422,49.7347556775108,26.4704169613956,38.9335926426314,33.0147040061184,13.3450627054112,12.4693625400003,14.1330999164495,10.9534788208725,11.1192829754028,6.37089929929968,9.13820525649132,16.6583841734181,4.31257693094915,37.0799559387597,45.6978149467147,63.5217280379257,17.4936416504444,16.6189395164479,10.8291139378263,16.9945827122062,17.9856932952491,15.8457850876545,11.5207140903505,6.22506357277798,11.6986963246582,4.94433181283487,11.3676818391376,5.99200221036809,3.84218305321555,22.0858874217057,23.0860154547191,23.5563956713548,12.5686433137674,11.9269012113871,24.3756690437759,30.0954778997262,16.5459381589804,4.40463523997555,8.93811366596314,11.5204899942183,15.8263545276233,15.0039735507952,14.0646610050325,8.37548997004143,4.50210088025344,7.63991238884051,14.7314292736834,14.2371680799103,16.4031512326265,25.2168223799503,28.7171928405785,24.0587525622393,12.9063581547208,9.51959867190851,9.17495425784289,18.8435161059824,12.5447528387254,10.9546647702766,22.3263722577256,17.9252343175979,26.5004680882755,12.3942209403479,26.9485602570067,43.3168907501298,78.2173373468664,24.246996593256,23.8158273546593,16.1767822404731,16.0999270403875,43.5015644527248,17.3677302705845,24.287945747259,18.8768596553528,22.8309342283498,18.6896074285252,16.2272415847273,17.2163230121655,22.494742063828,12.2909453381925,52.1920225650426,27.1768307911647,37.9847411751877,38.7900202508178,24.2309289583559,12.8823550685081,11.3101221679266,15.3274233125155,51.5205035375457,50.9917321344397,45.7452817463033,9.43681028250383,12.3525162761029,19.9790419859454,11.298580812498,12.5300574091862,6.44142938134636,8.4365456795234,21.895463227818,30.2308938582526,12.3834151632501,13.0473950649614,21.079511759958,25.0593293832485,25.0286360429435,22.6057226753573,22.7241907165435,20.1138540847214,22.8632207925738,13.1938719076898,28.0238390812695,24.2055782614809,23.929352886297,23.4539433697505,24.7462051810782,26.1189124891625,25.9285491874009,23.2870092177637,63.1991868581911,50.6975377015989,37.5095819202182,22.3695834338342,18.0585066185444,17.4660199617184,22.9642393517654,20.46348010173,18.5120535464854,20.2304531932855,18.5108646965737,12.0268302638185,20.899100939012,16.7450813360677,13.4574223846121,10.8187990694746,16.2467085315377,12.3469905259542,10.9350773253346,18.8315440654091,9.91256348951394,12.9580777665137,25.8078783147633,27.4039272795317,27.8353716455722,20.9750865608276,21.3482922091076,13.5060194539917,19.9302205848695,13.6700132420929,13.8234364840148,17.3092130675801,17.7417319278399,17.9763881730844,15.1296634912286,14.9355954940775,24.4671592229475,30.5043528667976,19.1603150644237,26.4746726198908,21.1408211012712,19.6380295692892,19.4768534342712,16.3847264257358,12.4028994994686,10.8589504251184,13.3403682189217,49.5529963976799,40.0980350030934,45.8718709265102,45.8463874338017,35.2118653238529,30.300476361989,33.9481442191957,25.1309601501305,29.3780712111247,31.629005436018,21.2120340171047,16.8500343481863,19.9537313578218,21.3482922091076,15.4381926836277,18.2905658264939,28.4237117655727,37.1560146287819,30.0448801822083,26.5199980566007,29.983620082085,17.853273066451,22.6355031515047,23.4876364718225,17.717175171902,19.7723913135284,19.4997344511728,20.7221978239075,16.9239398540369,19.6028669121054,20.1245103012923,27.538799289066,24.2824336748165,8.83028244932856,11.0178985396671,26.8853310417748,11.8661335786055,22.7165917979705,21.4741309363151,22.8348801596767,22.2240982095873,18.7150886229211,32.8368775715046,27.5271277138928,21.3346776275258,23.7172666767914,7.71171159412337,18.5941511622832,20.2994788180671,26.2248004559257,18.476653772924,9.2921596837974,22.5785991624133,19.6510312027088,16.7858520982749,11.5167738223501,10.7602301780375,22.4832615056352,22.9026249570828,24.9548164869305,17.0659849285341,20.0295356292498,17.5330423521918,16.000661470428,25.7487364464774,13.5826617971892,19.9333442579381,22.1675292052842,18.5503570306153,16.1258040190079,8.52501857520878,24.6405293466896,22.6660315824288,9.70324951441832,34.2963406118279,25.5113794179531,30.3374012388624,32.4692775688531,37.588266041619,14.2825609948627,13.3506217447567,52.2864895241429,35.4985412896743,35.7425437823544,62.161590811548,66.7067831278603,50.1024199322285,33.3157722787956,40.3060182692135,40.0779924032829,15.2747298882418,25.3068794864908,29.0746837991394,25.1652444114797,24.0451540416639,19.652630737156,23.0618032318043,19.8368293740806,17.53764811293,18.146096260851,11.1841076355647,20.2929457926309,20.932316446157,20.6823113071372,25.2786544847262,20.5364119329592,20.7816034353657,19.3639443765494,22.9159717325352,22.5447590515278,20.7762343910365,13.5374102941197,65.0982908494047,25.1379266959804,24.3424968480641,35.5983054959158,59.9739430486063,49.8690200500975,53.6071704859061,57.8942946524343,67.9504208151034,65.2330264966799,50.2114401981466,55.1611604986999,58.8816470838816,51.6595907642535,14.7374749349887,32.4099491926134,47.1894885765842,42.1390387073837,13.7164611762855,20.2697073487277,20.5129819179337,23.7948900777763,11.034586288778,9.60078132449013,9.66682996665071,8.02053718815155,8.42080593484069,14.3867329151835,15.107877947794,8.77529250301348,12.158672487054,9.9691329976525,12.4262474820437,34.4573993979467,26.3356416444681,22.1953687480374,25.0399918580343,36.6823034598969,29.9664918773523,20.6689456855502,28.4328378989674,28.5618096536716,26.0278128116711,27.6292436880361,32.8209834011773,26.1259805840972,28.6832682773814,25.5013482162923,24.2909782554368,28.6234285083793,29.5151107309469,30.906442560248,28.7037894262075,31.8868404718436,26.2664193115819,27.8970342238365,23.6914659110695,32.4677362432891,29.8689565857618,27.2562679580431,27.0961802780978,25.2595651753303,23.567975409625,24.4388137335799,28.3692909241623,33.9661765830842,29.9028103488914,23.3416999287181,16.2376875659665,21.2877763685322,17.1896843238639,13.5814715768879,15.8825821766051,16.6944841646703 | ||
|short_description=p1@Eri1 | |short_description=p1@Eri1 | ||
}} | }} |
Latest revision as of 22:59, 1 October 2015
Short description: | p1@Eri1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Eri1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1134 |
Association with transcript: | 0bp_to_ENSMUST00000033927, NM_026067, uc009lky.2_5end |
EntrezGene: | Eri1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 8.76e-09 | 32 |
hematopoietic oligopotent progenitor cell | 8.76e-09 | 32 |
hematopoietic stem cell | 8.76e-09 | 32 |
hematopoietic multipotent progenitor cell | 8.76e-09 | 32 |
lymphoid lineage restricted progenitor cell | 4.63e-07 | 12 |
lymphocyte | 5.14e-07 | 13 |
common lymphoid progenitor | 5.14e-07 | 13 |
T cell | 9.99e-07 | 11 |
pro-T cell | 9.99e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
hemopoietic organ | 2.26e-15 | 29 |
immune organ | 2.26e-15 | 29 |
hematopoietic system | 1.62e-13 | 45 |
blood island | 1.62e-13 | 45 |
hemolymphoid system | 5.99e-13 | 48 |
immune system | 5.99e-13 | 48 |
mixed endoderm/mesoderm-derived structure | 1.59e-12 | 35 |
thymus | 3.29e-12 | 23 |
neck | 3.29e-12 | 23 |
respiratory system epithelium | 3.29e-12 | 23 |
hemolymphoid system gland | 3.29e-12 | 23 |
pharyngeal epithelium | 3.29e-12 | 23 |
thymic region | 3.29e-12 | 23 |
pharyngeal gland | 3.29e-12 | 23 |
entire pharyngeal arch endoderm | 3.29e-12 | 23 |
thymus primordium | 3.29e-12 | 23 |
early pharyngeal endoderm | 3.29e-12 | 23 |
pharynx | 3.24e-11 | 24 |
upper respiratory tract | 3.24e-11 | 24 |
chordate pharynx | 3.24e-11 | 24 |
pharyngeal arch system | 3.24e-11 | 24 |
pharyngeal region of foregut | 3.24e-11 | 24 |
gland of gut | 5.81e-11 | 24 |
segment of respiratory tract | 3.61e-10 | 27 |
respiratory tract | 2.82e-08 | 41 |
foregut | 3.23e-08 | 80 |
gut epithelium | 1.01e-07 | 55 |
respiratory system | 1.30e-07 | 42 |
endo-epithelium | 2.77e-07 | 69 |
anterior region of body | 8.91e-07 | 43 |