FFCP PHASE1:Mm9::chr1:172787584..172787594,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2 | |MCL_coexpression_id=2 | ||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:172787584..172787594,- | |||
|description=CAGE_peak_at_chr1:172787584..172787594,- | |description=CAGE_peak_at_chr1:172787584..172787594,- | ||
|id=chr1:172787584..172787594,- | |id=chr1:172787584..172787594,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002021!3.12e-26!10;UBERON:0000411!3.12e-26!10;UBERON:0001950!3.12e-26!10;UBERON:0002619!4.98e-19!17;UBERON:0000956!8.16e-19!21;UBERON:0001869!8.16e-19!21;UBERON:0000203!8.16e-19!21;UBERON:0002616!1.64e-16!49;UBERON:0000955!3.95e-16!50;UBERON:0006238!3.95e-16!50;UBERON:0002780!4.66e-16!39;UBERON:0001890!4.66e-16!39;UBERON:0006240!4.66e-16!39;UBERON:0002791!6.00e-16!29;UBERON:0003528!6.00e-16!29;UBERON:0001893!6.00e-16!29;UBERON:0003080!1.34e-15!40;UBERON:0002020!2.50e-13!34;UBERON:0003056!2.60e-12!49;UBERON:0000033!2.97e-12!63;UBERON:0001049!1.81e-11!52;UBERON:0005068!1.81e-11!52;UBERON:0006241!1.81e-11!52;UBERON:0007135!1.81e-11!52;UBERON:0001017!3.30e-10!73;UBERON:0005743!3.30e-10!73;UBERON:0000073!7.28e-10!75;UBERON:0001016!7.28e-10!75;UBERON:0007811!2.94e-08!86;UBERON:0002346!8.88e-08!71;UBERON:0003075!8.88e-08!71;UBERON:0007284!8.88e-08!71;UBERON:0000153!2.52e-07!94 | |ontology_enrichment_uberon=UBERON:0002021!3.12e-26!10;UBERON:0000411!3.12e-26!10;UBERON:0001950!3.12e-26!10;UBERON:0002619!4.98e-19!17;UBERON:0000956!8.16e-19!21;UBERON:0001869!8.16e-19!21;UBERON:0000203!8.16e-19!21;UBERON:0002616!1.64e-16!49;UBERON:0000955!3.95e-16!50;UBERON:0006238!3.95e-16!50;UBERON:0002780!4.66e-16!39;UBERON:0001890!4.66e-16!39;UBERON:0006240!4.66e-16!39;UBERON:0002791!6.00e-16!29;UBERON:0003528!6.00e-16!29;UBERON:0001893!6.00e-16!29;UBERON:0003080!1.34e-15!40;UBERON:0002020!2.50e-13!34;UBERON:0003056!2.60e-12!49;UBERON:0000033!2.97e-12!63;UBERON:0001049!1.81e-11!52;UBERON:0005068!1.81e-11!52;UBERON:0006241!1.81e-11!52;UBERON:0007135!1.81e-11!52;UBERON:0001017!3.30e-10!73;UBERON:0005743!3.30e-10!73;UBERON:0000073!7.28e-10!75;UBERON:0001016!7.28e-10!75;UBERON:0007811!2.94e-08!86;UBERON:0002346!8.88e-08!71;UBERON:0003075!8.88e-08!71;UBERON:0007284!8.88e-08!71;UBERON:0000153!2.52e-07!94 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,1.11e-34,10;UBERON:0000411,1.11e-34,10;UBERON:0001950,1.11e-34,10;UBERON:0000956,2.81e-29,21;UBERON:0001869,2.81e-29,21;UBERON:0000203,2.81e-29,21;UBERON:0002619,1.04e-27,17;UBERON:0003528,3.48e-21,29;UBERON:0002791,3.48e-21,29;UBERON:0001893,3.48e-21,29;UBERON:0002020,4.72e-18,34;UBERON:0002780,1.02e-15,39;UBERON:0001890,1.02e-15,39;UBERON:0006240,1.02e-15,39;UBERON:0003080,2.55e-15,40;UBERON:0002616,2.69e-13,46;UBERON:0000955,5.22e-13,47;UBERON:0006238,5.22e-13,47;UBERON:0003056,1.81e-12,49;UBERON:0001049,9.80e-12,52;UBERON:0005068,9.80e-12,52;UBERON:0006241,9.80e-12,52;UBERON:0007135,9.80e-12,52;UBERON:0001851,2.31e-11,1;UBERON:0005889,2.31e-11,1;UBERON:0000073,2.72e-11,54;UBERON:0002346,1.75e-09,64;UBERON:0003075,1.75e-09,64;UBERON:0007284,1.75e-09,64;UBERON:0010371,2.84e-08,73;UBERON:0001017,2.84e-08,73;UBERON:0001016,4.83e-08,75 | |||
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|short_description=p@chr1:172787584..172787594,- | |short_description=p@chr1:172787584..172787594,- | ||
}} | }} |
Latest revision as of 05:23, 5 August 2015
Short description: | p@chr1:172787584..172787594, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:172787584..172787594, - |
Coexpression cluster: | MCL_coexpression_mm9:2 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
occipital lobe | 1.11e-34 | 10 |
visual cortex | 1.11e-34 | 10 |
neocortex | 1.11e-34 | 10 |
cerebral cortex | 2.81e-29 | 21 |
cerebral hemisphere | 2.81e-29 | 21 |
pallium | 2.81e-29 | 21 |
regional part of cerebral cortex | 1.04e-27 | 17 |
brain grey matter | 3.48e-21 | 29 |
regional part of telencephalon | 3.48e-21 | 29 |
telencephalon | 3.48e-21 | 29 |
gray matter | 4.72e-18 | 34 |
regional part of forebrain | 1.02e-15 | 39 |
forebrain | 1.02e-15 | 39 |
future forebrain | 1.02e-15 | 39 |
anterior neural tube | 2.55e-15 | 40 |
regional part of brain | 2.69e-13 | 46 |
brain | 5.22e-13 | 47 |
future brain | 5.22e-13 | 47 |
pre-chordal neural plate | 1.81e-12 | 49 |
neural tube | 9.80e-12 | 52 |
neural rod | 9.80e-12 | 52 |
future spinal cord | 9.80e-12 | 52 |
neural keel | 9.80e-12 | 52 |
cortex | 2.31e-11 | 1 |
zygote cortex | 2.31e-11 | 1 |
regional part of nervous system | 2.72e-11 | 54 |
neurectoderm | 1.75e-09 | 64 |
neural plate | 1.75e-09 | 64 |
presumptive neural plate | 1.75e-09 | 64 |
ecto-epithelium | 2.84e-08 | 73 |
central nervous system | 2.84e-08 | 73 |
nervous system | 4.83e-08 | 75 |