FFCP PHASE1:Mm9::chr1:137482065..137482093,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=215690 | |EntrezGene=215690 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=13 | |MCL_coexpression_id=13 | ||
|TSSclassifier=NA | |||
|UniProt=Q8CH77 | |UniProt=Q8CH77 | ||
|association_with_transcript=-133bp_to_ENSMUST00000040599,ENSMUST00000067414,NM_173437,uc007ctg.2_5end | |association_with_transcript=-133bp_to_ENSMUST00000040599,ENSMUST00000067414,NM_173437,uc007ctg.2_5end | ||
|cluster_id=chr1:137482065..137482093,- | |||
|description=CAGE_peak_4_at_Nav1_5end | |description=CAGE_peak_4_at_Nav1_5end | ||
|id=chr1:137482065..137482093,- | |id=chr1:137482065..137482093,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.11e-07,23;CL:0000337,1.11e-07,23 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!3.49e-13!71;UBERON:0003075!3.49e-13!71;UBERON:0007284!3.49e-13!71;UBERON:0001049!3.02e-12!52;UBERON:0005068!3.02e-12!52;UBERON:0006241!3.02e-12!52;UBERON:0007135!3.02e-12!52;UBERON:0004121!9.27e-11!102;UBERON:0000924!9.27e-11!102;UBERON:0006601!9.27e-11!102;UBERON:0001017!1.59e-10!73;UBERON:0005743!1.59e-10!73;UBERON:0000955!2.76e-10!50;UBERON:0006238!2.76e-10!50;UBERON:0000073!3.35e-10!75;UBERON:0001016!3.35e-10!75;UBERON:0002020!8.62e-10!34;UBERON:0002616!9.21e-10!49;UBERON:0000468!2.02e-09!333;UBERON:0003080!6.54e-09!40;UBERON:0003056!6.75e-09!49;UBERON:0000033!1.19e-08!63;UBERON:0002780!1.54e-08!39;UBERON:0001890!1.54e-08!39;UBERON:0006240!1.54e-08!39;UBERON:0002791!6.47e-08!29;UBERON:0003528!6.47e-08!29;UBERON:0001893!6.47e-08!29;UBERON:0000956!9.89e-07!21;UBERON:0001869!9.89e-07!21;UBERON:0000203!9.89e-07!21 | |ontology_enrichment_uberon=UBERON:0002346!3.49e-13!71;UBERON:0003075!3.49e-13!71;UBERON:0007284!3.49e-13!71;UBERON:0001049!3.02e-12!52;UBERON:0005068!3.02e-12!52;UBERON:0006241!3.02e-12!52;UBERON:0007135!3.02e-12!52;UBERON:0004121!9.27e-11!102;UBERON:0000924!9.27e-11!102;UBERON:0006601!9.27e-11!102;UBERON:0001017!1.59e-10!73;UBERON:0005743!1.59e-10!73;UBERON:0000955!2.76e-10!50;UBERON:0006238!2.76e-10!50;UBERON:0000073!3.35e-10!75;UBERON:0001016!3.35e-10!75;UBERON:0002020!8.62e-10!34;UBERON:0002616!9.21e-10!49;UBERON:0000468!2.02e-09!333;UBERON:0003080!6.54e-09!40;UBERON:0003056!6.75e-09!49;UBERON:0000033!1.19e-08!63;UBERON:0002780!1.54e-08!39;UBERON:0001890!1.54e-08!39;UBERON:0006240!1.54e-08!39;UBERON:0002791!6.47e-08!29;UBERON:0003528!6.47e-08!29;UBERON:0001893!6.47e-08!29;UBERON:0000956!9.89e-07!21;UBERON:0001869!9.89e-07!21;UBERON:0000203!9.89e-07!21 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,3.64e-13,52;UBERON:0005068,3.64e-13,52;UBERON:0006241,3.64e-13,52;UBERON:0007135,3.64e-13,52;UBERON:0000073,8.19e-13,54;UBERON:0002020,1.66e-12,34;UBERON:0002346,3.58e-11,64;UBERON:0003075,3.58e-11,64;UBERON:0007284,3.58e-11,64;UBERON:0000955,7.44e-11,47;UBERON:0006238,7.44e-11,47;UBERON:0002616,3.38e-10,46;UBERON:0003528,5.51e-10,29;UBERON:0002791,5.51e-10,29;UBERON:0001893,5.51e-10,29;UBERON:0001017,6.50e-10,73;UBERON:0010371,7.20e-10,73;UBERON:0000956,2.20e-09,21;UBERON:0001869,2.20e-09,21;UBERON:0000203,2.20e-09,21;UBERON:0003080,2.57e-09,40;UBERON:0001016,2.87e-09,75;UBERON:0002780,7.54e-09,39;UBERON:0001890,7.54e-09,39;UBERON:0006240,7.54e-09,39;UBERON:0010314,1.67e-08,92;UBERON:0003056,4.13e-08,49;UBERON:0004121,2.02e-07,95;UBERON:0000924,2.02e-07,95;UBERON:0006601,2.02e-07,95;UBERON:0002619,4.21e-07,17 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0.16787927191189,0.233612640595526,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,1.10556277196391,0.297872853602656,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0.218025156380447,0,0,0.55994568650145,0,0,0,0,0,0.573066879877513,0.515672092277442,1.21389876515759,0.528990979272033,1.26766280701236,0.338844532069132,0,0.899899717281399,0.988866362566974,0,0.898800331555214,0.384218305321555,2.48855069540346,3.51015439662396,1.47227472945967,2.57085885963423,1.32521124570968,2.08234358665422,2.87536413054709,4.5960939330501,0,1.0214987046815,2.4577045320999,1.18697658957174,1.46380229763855,0.52091337055676,1.3959149950069,1.12552522006336,1.22238598221448,2.06240009831567,2.42031857358475,1.4911955666024,0.37863096666592,0.529000920747499,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0.517875767294343,0.890652834388949,1.21439728736295,1.52232739156071,0.922461989024234,1.3565037649736,3.64524992120685,0.251333182659351,0.988779870937496,1.44599356919912,0,0.808834249737046,0.441683036920787,0.969750506270444,0,1.46390398505774,1.67557365450764,0,0,0,0,1.9472783122627,0.915001205637253,8.04187853522332,2.08589184230732,2.81287003063364,2.70124457927428,1.62241263067758,2.03678727700633,0.622034853050465,0,0.841767423545896,1.30120442962704,0.229902104433473,0.360124259610698,0.90422890701429,1.02054748726992,1.0249097622788,0.843315521037559,1.55222022443409,1.07783996466421,0.378212160335639,0.879755620819744,1.31517439456545,1.11218899690239,2.089512999133,0.411564272815887,3.78165106955137,0,0,0,0.621377317606506,0.938104239924385,0.540186184383045,0.946978942340841,0.393528463494808,1.23413690309903,0.465067889500816,0.804820204198858,0.467061369468678,0.658239399653922,0.32833492815819,1.4592385718254,2.48539978623065,1.75640092232841,2.81833479396781,4.20579897128254,5.9684675179985,0,0.264450566663544,0.639864751605702,2.32236671860439,1.9330119198314,1.21010114774006,1.11189021922435,0.380451252225118,0.474529061544512,0.988193728344065,0.754005626400808,0.795825888164603,0.779856348476481,0,0.216138049874694,0,0.379335801906163,0.799739588268102,3.38123207019241,0,0.581857461502877,0.210407459670956,0.632365371242573,0,0,0,0.296452627087149,0.166845105716094,0.589676985339609,0,0.202860121388503,0.72353147925725,0,0,0.162135226775035,0.549122826376163,0,0,0,0,0,0,0.554259570499814,0.757965647081939,1.46668478797823,0.509235257325564,0,0.167506257441816,0.476087281772027,0.780534591431195,0.630540576424764,0.8858587585951,0.478364305972461,0.163863314715738,0,0.433947175744535,0,0,0.491764273019036,0.275936746304732,2.0871576698413,2.22702204525186,0,1.26235463602186,0.631016438832513,1.17131623288992,0.646270193198397,0,0.222798674082394,0.849229592366497,0.404810701674894,2.04579100537918,0.395287777946524,4.17717711348349,1.27746076687442,3.20518086601059,1.46598263418218,2.14461159864296,0,0.728341908464944,0.906970670894253,0.377210159511796,0.885905678642318,0.614870295887855,0,0.363533729477506,0.356497378384721,1.58018378967908,1.05418608574999,1.03135543248187,4.42571487479924,0.720244376125241,0.517434735131018,0.857348140126369,0.354680467284547,0.891844088010353,0.493647061806363,1.522324745573,0.704015124191131,4.66030555900404,0.441056796109924,1.31909002353184,1.77610869365496,1.08563264870681,0.954978752025092,0.328281799490123,0.582961673259701,2.22510362412612,0,0.619160603889667,1.11116716421827,0,0,0,0,0,0,0.954670618015114,2.21435195506795,1.21991680276109,0.972048067396211,0.836353184057875,0.655087691238533,0.809186078308924,1.65306911450672,0.523511883968059,0.259229946583586,0,0,5.23307911153926,3.64008679005615,7.77804753376191,6.97463046779748,7.43406952159424,8.68443565978579,4.1665403150064,1.78260885523708,0.483168241652012,0,0.316011120628178,0.405450430580328,0.308132871494482,0.25984164595559,0.358053391334963,0.198681354781265,0.360586348559907,0.147689527174577,0.100966449948148,0.0762068066549998,0.100826185136841,0.0974578807397524,0.192423683280659,0.116876902181569,0.226730383615211,0.443971906748129,0.986852422704233,0.167884616364078,1.15913756419314,0.93841237725591,2.01466786693992,1.07184189539533,0,6.21227026878773,7.82552902062201,6.30185064783336,4.46818274093588,2.74033007908257,1.5107877947794,0.675022500231806,1.35096360967266,2.26571204492102,0,1.66059756134683,1.19707462020309,1.02440163452481,1.21553358534147,1.88651846365184,1.83843508450014,1.11123363900808,0.824140228955577,0.962757628775446,1.26348605881899,1.2673964994512,1.50901073108861,1.87283014939765,2.4969809437899,1.66562859971278,2.38146845641537,2.54945517078682,1.54327376370964,2.06042950401653,1.76638704161277,0.685738504770831,0.887379030796687,0.953744759789284,1.45346416632329,1.41164070622996,1.4384483341585,1.28049581010941,1.05227884575137,1.90125759384206,1.68342681497322,2.01679530811096,2.06859412988683,1.22769312950907,1.23949472948773,1.92906610981141,0.999242311751784,2.1053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|phase1_expression=0.320297694209588,0,0,0,0,0.16787927191189,0.233612640595526,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,1.10556277196391,0.297872853602656,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0.218025156380447,0,0,0.55994568650145,0,0,0,0,0,0.573066879877513,0.515672092277442,1.21389876515759,0.528990979272033,1.26766280701236,0.338844532069132,0,0.899899717281399,0.988866362566974,0,0.898800331555214,0.384218305321555,2.48855069540346,3.51015439662396,1.47227472945967,2.57085885963423,1.32521124570968,2.08234358665422,2.87536413054709,4.5960939330501,0,1.0214987046815,2.4577045320999,1.18697658957174,1.46380229763855,0.52091337055676,1.3959149950069,1.12552522006336,1.22238598221448,2.06240009831567,2.42031857358475,1.4911955666024,0.37863096666592,0.529000920747499,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0.517875767294343,0.890652834388949,1.21439728736295,1.52232739156071,0.922461989024234,1.3565037649736,3.64524992120685,0.251333182659351,0.988779870937496,1.44599356919912,0,0.808834249737046,0.441683036920787,0.969750506270444,0,1.46390398505774,1.67557365450764,0,0,0,0,1.9472783122627,0.915001205637253,8.04187853522332,2.08589184230732,2.81287003063364,2.70124457927428,1.62241263067758,2.03678727700633,0.622034853050465,0,0.841767423545896,1.30120442962704,0.229902104433473,0.360124259610698,0.90422890701429,1.02054748726992,1.0249097622788,0.843315521037559,1.55222022443409,1.07783996466421,0.378212160335639,0.879755620819744,1.31517439456545,1.11218899690239,2.089512999133,0.411564272815887,3.78165106955137,0,0,0,0.621377317606506,0.938104239924385,0.540186184383045,0.946978942340841,0.393528463494808,1.23413690309903,0.465067889500816,0.804820204198858,0.467061369468678,0.658239399653922,0.32833492815819,1.4592385718254,2.48539978623065,1.75640092232841,2.81833479396781,4.20579897128254,5.9684675179985,0,0.264450566663544,0.639864751605702,2.32236671860439,1.9330119198314,1.21010114774006,1.11189021922435,0.380451252225118,0.474529061544512,0.988193728344065,0.754005626400808,0.795825888164603,0.779856348476481,0,0.216138049874694,0,0.379335801906163,0.799739588268102,3.38123207019241,0,0.581857461502877,0.210407459670956,0.632365371242573,0,0,0,0.296452627087149,0.166845105716094,0.589676985339609,0,0.202860121388503,0.72353147925725,0,0,0.162135226775035,0.549122826376163,0,0,0,0,0,0,0.554259570499814,0.757965647081939,1.46668478797823,0.509235257325564,0,0.167506257441816,0.476087281772027,0.780534591431195,0.630540576424764,0.8858587585951,0.478364305972461,0.163863314715738,0,0.433947175744535,0,0,0.491764273019036,0.275936746304732,2.0871576698413,2.22702204525186,0,1.26235463602186,0.631016438832513,1.17131623288992,0.646270193198397,0,0.222798674082394,0.849229592366497,0.404810701674894,2.04579100537918,0.395287777946524,4.17717711348349,1.27746076687442,3.20518086601059,1.46598263418218,2.14461159864296,0,0.728341908464944,0.906970670894253,0.377210159511796,0.885905678642318,0.614870295887855,0,0.363533729477506,0.356497378384721,1.58018378967908,1.05418608574999,1.03135543248187,4.42571487479924,0.720244376125241,0.517434735131018,0.857348140126369,0.354680467284547,0.891844088010353,0.493647061806363,1.522324745573,0.704015124191131,4.66030555900404,0.441056796109924,1.31909002353184,1.77610869365496,1.08563264870681,0.954978752025092,0.328281799490123,0.582961673259701,2.22510362412612,0,0.619160603889667,1.11116716421827,0,0,0,0,0,0,0.954670618015114,2.21435195506795,1.21991680276109,0.972048067396211,0.836353184057875,0.655087691238533,0.809186078308924,1.65306911450672,0.523511883968059,0.259229946583586,0,0,5.23307911153926,3.64008679005615,7.77804753376191,6.97463046779748,7.43406952159424,8.68443565978579,4.1665403150064,1.78260885523708,0.483168241652012,0,0.316011120628178,0.405450430580328,0.308132871494482,0.25984164595559,0.358053391334963,0.198681354781265,0.360586348559907,0.147689527174577,0.100966449948148,0.0762068066549998,0.100826185136841,0.0974578807397524,0.192423683280659,0.116876902181569,0.226730383615211,0.443971906748129,0.986852422704233,0.167884616364078,1.15913756419314,0.93841237725591,2.01466786693992,1.07184189539533,0,6.21227026878773,7.82552902062201,6.30185064783336,4.46818274093588,2.74033007908257,1.5107877947794,0.675022500231806,1.35096360967266,2.26571204492102,0,1.66059756134683,1.19707462020309,1.02440163452481,1.21553358534147,1.88651846365184,1.83843508450014,1.11123363900808,0.824140228955577,0.962757628775446,1.26348605881899,1.2673964994512,1.50901073108861,1.87283014939765,2.4969809437899,1.66562859971278,2.38146845641537,2.54945517078682,1.54327376370964,2.06042950401653,1.76638704161277,0.685738504770831,0.887379030796687,0.953744759789284,1.45346416632329,1.41164070622996,1.4384483341585,1.28049581010941,1.05227884575137,1.90125759384206,1.68342681497322,2.01679530811096,2.06859412988683,1.22769312950907,1.23949472948773,1.92906610981141,0.999242311751784,2.1053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| ||
|short_description=p4@Nav1 | |short_description=p4@Nav1 | ||
}} | }} |
Latest revision as of 10:46, 26 September 2015
Short description: | p4@Nav1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Nav1_5end |
Coexpression cluster: | MCL_coexpression_mm9:13 |
Association with transcript: | -133bp_to_ENSMUST00000040599, ENSMUST00000067414, NM_173437, uc007ctg.2_5end |
EntrezGene: | Nav1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.11e-07 | 23 |
neuroblast (sensu Vertebrata) | 1.11e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
neural tube | 3.64e-13 | 52 |
neural rod | 3.64e-13 | 52 |
future spinal cord | 3.64e-13 | 52 |
neural keel | 3.64e-13 | 52 |
regional part of nervous system | 8.19e-13 | 54 |
gray matter | 1.66e-12 | 34 |
neurectoderm | 3.58e-11 | 64 |
neural plate | 3.58e-11 | 64 |
presumptive neural plate | 3.58e-11 | 64 |
brain | 7.44e-11 | 47 |
future brain | 7.44e-11 | 47 |
regional part of brain | 3.38e-10 | 46 |
brain grey matter | 5.51e-10 | 29 |
regional part of telencephalon | 5.51e-10 | 29 |
telencephalon | 5.51e-10 | 29 |
central nervous system | 6.50e-10 | 73 |
ecto-epithelium | 7.20e-10 | 73 |
cerebral cortex | 2.20e-09 | 21 |
cerebral hemisphere | 2.20e-09 | 21 |
pallium | 2.20e-09 | 21 |
anterior neural tube | 2.57e-09 | 40 |
nervous system | 2.87e-09 | 75 |
regional part of forebrain | 7.54e-09 | 39 |
forebrain | 7.54e-09 | 39 |
future forebrain | 7.54e-09 | 39 |
structure with developmental contribution from neural crest | 1.67e-08 | 92 |
pre-chordal neural plate | 4.13e-08 | 49 |
ectoderm-derived structure | 2.02e-07 | 95 |
ectoderm | 2.02e-07 | 95 |
presumptive ectoderm | 2.02e-07 | 95 |
regional part of cerebral cortex | 4.21e-07 | 17 |