FFCP PHASE1:Mm9::chr2:179777201..179777267,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=269397 | |EntrezGene=269397 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=13 | |MCL_coexpression_id=13 | ||
|TSSclassifier=NA | |||
|UniProt=Q8BW22 | |UniProt=Q8BW22 | ||
|association_with_transcript=0bp_to_ENSMUST00000041126_5end | |association_with_transcript=0bp_to_ENSMUST00000041126_5end | ||
|cluster_id=chr2:179777201..179777267,+ | |||
|description=CAGE_peak_2_at_Ss18l1_5end | |description=CAGE_peak_2_at_Ss18l1_5end | ||
|id=chr2:179777201..179777267,+ | |id=chr2:179777201..179777267,+ | ||
|ontology_enrichment_celltype=CL:0000117!3.16e-15!23;CL:0000337!3.16e-15!23;CL:0000540!6.07e-12!33;CL:0000047!6.07e-12!33;CL:0000031!6.07e-12!33;CL:0000404!6.07e-12!33;CL:0000393!1.83e-08!39;CL:0000211!1.83e-08!39;CL:0002319!2.57e-07!43;CL:0000221!6.45e-07!44;CL:0000133!6.45e-07!44 | |ontology_enrichment_celltype=CL:0000117!3.16e-15!23;CL:0000337!3.16e-15!23;CL:0000540!6.07e-12!33;CL:0000047!6.07e-12!33;CL:0000031!6.07e-12!33;CL:0000404!6.07e-12!33;CL:0000393!1.83e-08!39;CL:0000211!1.83e-08!39;CL:0002319!2.57e-07!43;CL:0000221!6.45e-07!44;CL:0000133!6.45e-07!44 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.96e-15,23;CL:0000337,2.96e-15,23;CL:0000540,5.78e-12,33;CL:0000047,5.78e-12,33;CL:0000031,5.78e-12,33;CL:0000404,5.78e-12,33;CL:0000393,2.29e-08,39;CL:0000211,2.29e-08,39;CL:0002319,1.79e-07,43;CL:0000221,4.57e-07,44;CL:0000133,4.57e-07,44 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!3.09e-18!34;UBERON:0001049!1.58e-17!52;UBERON:0005068!1.58e-17!52;UBERON:0006241!1.58e-17!52;UBERON:0007135!1.58e-17!52;UBERON:0001017!1.64e-17!73;UBERON:0005743!1.64e-17!73;UBERON:0000073!2.24e-17!75;UBERON:0001016!2.24e-17!75;UBERON:0002346!4.76e-17!71;UBERON:0003075!4.76e-17!71;UBERON:0007284!4.76e-17!71;UBERON:0000955!2.20e-16!50;UBERON:0006238!2.20e-16!50;UBERON:0000033!2.74e-16!63;UBERON:0002616!7.23e-16!49;UBERON:0004121!8.79e-16!102;UBERON:0000924!8.79e-16!102;UBERON:0006601!8.79e-16!102;UBERON:0003056!2.10e-15!49;UBERON:0002791!3.54e-15!29;UBERON:0003528!3.54e-15!29;UBERON:0001893!3.54e-15!29;UBERON:0003080!3.88e-14!40;UBERON:0002780!1.50e-13!39;UBERON:0001890!1.50e-13!39;UBERON:0006240!1.50e-13!39;UBERON:0007811!6.80e-12!86;UBERON:0000956!1.73e-10!21;UBERON:0001869!1.73e-10!21;UBERON:0000203!1.73e-10!21;UBERON:0000153!6.25e-10!94;UBERON:0002619!2.90e-08!17 | |ontology_enrichment_uberon=UBERON:0002020!3.09e-18!34;UBERON:0001049!1.58e-17!52;UBERON:0005068!1.58e-17!52;UBERON:0006241!1.58e-17!52;UBERON:0007135!1.58e-17!52;UBERON:0001017!1.64e-17!73;UBERON:0005743!1.64e-17!73;UBERON:0000073!2.24e-17!75;UBERON:0001016!2.24e-17!75;UBERON:0002346!4.76e-17!71;UBERON:0003075!4.76e-17!71;UBERON:0007284!4.76e-17!71;UBERON:0000955!2.20e-16!50;UBERON:0006238!2.20e-16!50;UBERON:0000033!2.74e-16!63;UBERON:0002616!7.23e-16!49;UBERON:0004121!8.79e-16!102;UBERON:0000924!8.79e-16!102;UBERON:0006601!8.79e-16!102;UBERON:0003056!2.10e-15!49;UBERON:0002791!3.54e-15!29;UBERON:0003528!3.54e-15!29;UBERON:0001893!3.54e-15!29;UBERON:0003080!3.88e-14!40;UBERON:0002780!1.50e-13!39;UBERON:0001890!1.50e-13!39;UBERON:0006240!1.50e-13!39;UBERON:0007811!6.80e-12!86;UBERON:0000956!1.73e-10!21;UBERON:0001869!1.73e-10!21;UBERON:0000203!1.73e-10!21;UBERON:0000153!6.25e-10!94;UBERON:0002619!2.90e-08!17 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,5.07e-19,54;UBERON:0002020,2.86e-18,34;UBERON:0002346,6.17e-18,64;UBERON:0003075,6.17e-18,64;UBERON:0007284,6.17e-18,64;UBERON:0001017,9.81e-18,73;UBERON:0001049,1.14e-17,52;UBERON:0005068,1.14e-17,52;UBERON:0006241,1.14e-17,52;UBERON:0007135,1.14e-17,52;UBERON:0001016,1.35e-17,75;UBERON:0004121,3.34e-16,95;UBERON:0000924,3.34e-16,95;UBERON:0006601,3.34e-16,95;UBERON:0003056,1.96e-15,49;UBERON:0003528,3.32e-15,29;UBERON:0002791,3.32e-15,29;UBERON:0001893,3.32e-15,29;UBERON:0000955,9.87e-15,47;UBERON:0006238,9.87e-15,47;UBERON:0002616,3.16e-14,46;UBERON:0010371,3.37e-14,73;UBERON:0003080,3.65e-14,40;UBERON:0002780,1.42e-13,39;UBERON:0001890,1.42e-13,39;UBERON:0006240,1.42e-13,39;UBERON:0000956,1.66e-10,21;UBERON:0001869,1.66e-10,21;UBERON:0000203,1.66e-10,21;UBERON:0010314,6.05e-09,92;UBERON:0002619,2.80e-08,17 | |||
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| ||
|short_description=p2@Ss18l1 | |short_description=p2@Ss18l1 | ||
}} | }} |
Latest revision as of 07:17, 26 September 2015
Short description: | p2@Ss18l1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Ss18l1_5end |
Coexpression cluster: | MCL_coexpression_mm9:13 |
Association with transcript: | 0bp_to_ENSMUST00000041126_5end |
EntrezGene: | Ss18l1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.96e-15 | 23 |
neuroblast (sensu Vertebrata) | 2.96e-15 | 23 |
neuron | 5.78e-12 | 33 |
neuronal stem cell | 5.78e-12 | 33 |
neuroblast | 5.78e-12 | 33 |
electrically signaling cell | 5.78e-12 | 33 |
electrically responsive cell | 2.29e-08 | 39 |
electrically active cell | 2.29e-08 | 39 |
neural cell | 1.79e-07 | 43 |
ectodermal cell | 4.57e-07 | 44 |
neurectodermal cell | 4.57e-07 | 44 |
Ontology term | p-value | n |
---|---|---|
regional part of nervous system | 5.07e-19 | 54 |
gray matter | 2.86e-18 | 34 |
neurectoderm | 6.17e-18 | 64 |
neural plate | 6.17e-18 | 64 |
presumptive neural plate | 6.17e-18 | 64 |
central nervous system | 9.81e-18 | 73 |
neural tube | 1.14e-17 | 52 |
neural rod | 1.14e-17 | 52 |
future spinal cord | 1.14e-17 | 52 |
neural keel | 1.14e-17 | 52 |
nervous system | 1.35e-17 | 75 |
ectoderm-derived structure | 3.34e-16 | 95 |
ectoderm | 3.34e-16 | 95 |
presumptive ectoderm | 3.34e-16 | 95 |
pre-chordal neural plate | 1.96e-15 | 49 |
brain grey matter | 3.32e-15 | 29 |
regional part of telencephalon | 3.32e-15 | 29 |
telencephalon | 3.32e-15 | 29 |
brain | 9.87e-15 | 47 |
future brain | 9.87e-15 | 47 |
regional part of brain | 3.16e-14 | 46 |
ecto-epithelium | 3.37e-14 | 73 |
anterior neural tube | 3.65e-14 | 40 |
regional part of forebrain | 1.42e-13 | 39 |
forebrain | 1.42e-13 | 39 |
future forebrain | 1.42e-13 | 39 |
cerebral cortex | 1.66e-10 | 21 |
cerebral hemisphere | 1.66e-10 | 21 |
pallium | 1.66e-10 | 21 |
structure with developmental contribution from neural crest | 6.05e-09 | 92 |
regional part of cerebral cortex | 2.80e-08 | 17 |