FFCP PHASE1:Hg19::chr2:216284024..216284054,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr2:216284024..216284054,+
|short_description=p@chr2:216284024..216284054,+
|description=CAGE_peak_at_chr2:216284024..216284054,+
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr2:216284024..216284054,+ | |||
|coexpression_cluster_id=C79 | |||
|description=CAGE_peak_at_chr2:216284024..216284054,+ | |||
|id=chr2:216284024..216284054,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.16e-35!180;CL:0000057!4.79e-27!75;CL:0002371!2.36e-20!591;CL:0000144!1.64e-19!625;CL:0000680!1.58e-15!57;CL:0000056!1.58e-15!57;CL:0000355!1.58e-15!57;CL:0000183!3.06e-15!59;CL:0000187!3.23e-14!54;CL:0000548!9.96e-14!679;CL:0000004!9.96e-14!679;CL:0000255!9.96e-14!679;CL:0000048!1.60e-13!430;CL:0000723!3.01e-13!436;CL:0000012!3.17e-13!682;CL:0000034!7.63e-13!444;CL:0002620!2.00e-12!23;CL:0000393!1.27e-11!60;CL:0000211!1.27e-11!60;CL:0000222!4.09e-11!119;CL:0002334!2.01e-09!12;CL:0000192!2.25e-09!42;CL:0000514!2.25e-09!42;CL:0000220!2.35e-09!246;CL:0002321!5.26e-09!248;CL:0000003!9.18e-08!722;CL:0000359!1.72e-07!32 | |||
|ontology_enrichment_celltype_v019=CL:0000134;1.09e-13;55!CL:0002620;9.94e-13;23!CL:0000723;5.39e-12;61!CL:0002334;6.27e-12;12!CL:0000048;4.88e-11;58!CL:0000057;2.05e-10;73!CL:0000034;2.28e-10;69!CL:0002320;1.09e-08;188!CL:0000349;1.17e-08;19!CL:0002570;4.02e-08;8!CL:0000187;8.02e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.85e-27,76;CL:0000048,9.40e-21,427;CL:0000723,1.01e-20,433;CL:0000034,7.12e-20,441;CL:0002620,6.10e-13,23;CL:0000680,2.89e-12,58;CL:0000056,2.89e-12,58;CL:0000355,2.89e-12,58;CL:0002320,3.04e-12,361;CL:0002334,5.75e-12,12;CL:0000187,8.53e-11,55;CL:0000134,2.09e-10,354;CL:0000219,2.65e-09,386;CL:0000393,9.93e-09,61;CL:0000211,9.93e-09,61;CL:0000349,1.24e-08,19;CL:0002570,3.22e-08,8 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2394;3.01e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,3.71e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0000914!4.75e-16!83;UBERON:0002329!4.75e-16!83;UBERON:0003077!4.75e-16!83;UBERON:0003059!4.75e-16!83;UBERON:0007282!4.75e-16!83;UBERON:0009618!4.75e-16!83;UBERON:0007285!4.75e-16!83;UBERON:0004290!3.73e-15!70;UBERON:0000486!3.30e-14!82;UBERON:0005256!6.67e-14!143;UBERON:0001134!2.82e-13!61;UBERON:0002036!2.82e-13!61;UBERON:0003082!2.82e-13!61;UBERON:0002385!7.02e-13!63;UBERON:0001015!7.02e-13!63;UBERON:0000383!7.02e-13!63;UBERON:0003914!1.18e-09!118;UBERON:0004872!2.26e-09!84;UBERON:0000490!2.37e-09!138;UBERON:0002049!6.30e-09!79;UBERON:0007798!6.30e-09!79;UBERON:0002100!1.05e-08!216;UBERON:0002199!2.25e-08!45;UBERON:0002416!2.25e-08!45;UBERON:0004535!3.57e-08!110;UBERON:0003102!8.75e-08!95;UBERON:0001009!9.71e-08!113;UBERON:0002097!1.25e-07!40;UBERON:0001637!2.98e-07!42;UBERON:0003509!2.98e-07!42;UBERON:0004572!2.98e-07!42;UBERON:0000055!6.38e-07!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0002384;2.18e-09;198!UBERON:0000478;1.16e-07;24!UBERON:0002385;2.28e-07;31!UBERON:0001015;2.28e-07;31!UBERON:0000383;2.28e-07;31!UBERON:0002199;3.14e-07;46!UBERON:0002416;3.14e-07;46!UBERON:0002204;3.22e-07;70!UBERON:0002097;3.27e-07;41!UBERON:0004457;4.99e-07;9!UBERON:0000042;4.99e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007503,3.70e-13,78;UBERON:0007524,5.60e-13,73;UBERON:0002329,9.32e-13,71;UBERON:0003059,9.32e-13,71;UBERON:0007282,9.32e-13,71;UBERON:0004290,9.32e-13,71;UBERON:0009618,9.32e-13,71;UBERON:0002384,1.58e-12,371;UBERON:0000486,1.69e-12,83;UBERON:0003077,2.16e-12,72;UBERON:0007285,2.16e-12,72;UBERON:0001134,9.91e-11,62;UBERON:0002036,9.91e-11,62;UBERON:0003082,9.91e-11,62;UBERON:0002385,4.79e-10,64;UBERON:0001015,4.79e-10,64;UBERON:0000383,4.79e-10,64;UBERON:0005256,1.03e-09,122;UBERON:0002199,1.34e-09,46;UBERON:0002416,1.34e-09,46;UBERON:0002097,1.49e-09,41;UBERON:0000926,4.43e-09,315;UBERON:0004120,4.43e-09,315;UBERON:0006603,4.43e-09,315;UBERON:0003104,6.39e-09,160;UBERON:0009142,6.39e-09,160;UBERON:0000478,1.16e-07,24;UBERON:0004923,1.94e-07,66;UBERON:0003102,6.94e-07,99;UBERON:0000490,8.38e-07,148;UBERON:0004872,9.86e-07,83 | |||
|phase1_expression=7.08545679155171,4.92431204949261,4.79244973926302,10.007329835313,3.5756887554183,11.3404008133048,0,0.631719873426831,0.261185628199839,0.245733936501509,1.39560233594486,1.74753097704138,4.48403862988371,1.11389717664042,3.31397375727916,3.36162573225888,3.61616716814386,2.92124036154949,2.92759679274304,0.123121058076788,1.02000345622126,1.56727360739044,0,0.136874425072884,1.38096903554283,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209658645508376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34362744548263,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,12.0726154746655,4.73091478821062,4.69870898099936,2.00535164254356,2.75208386025565,0,52.5565659926847,0.0945348171640679,0.665188192387692,1.22968699970376,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0.347140501607594,0,0.419499436209906,2.20094433552054,0,0.258416759169329,0.71153252537342,1.00416183829401,0,0,0.24406205754817,0,8.91156142669936,0.267899184852239,0,0.112611480483322,0,0,0.732806975721629,0,0,0.436094052142534,24.3516256330706,5.19185097824777,17.7428302289713,28.9704986956302,2.4826786753885,2.80338800071154,2.1349799145941,8.38669664618344,2.48968828319813,5.52313755485721,5.06731899651722,1.96764655938411,6.33793516927999,0.234321431833797,11.8620829195522,0.570471821544449,11.8064457635923,1.996386476944,2.5899671098901,1.54495887372473,1.63323337003915,2.7023549808589,0.826606249406124,0,3.4617370098998,0.910161361938026,2.87447256726495,1.5150250255866,0.875829639103749,0,0.438977620880838,3.37136575378922,2.10333282469236,2.38207584636044,18.8359117473305,4.69826255400848,5.72216133130817,19.2058301494017,2.88547081867629,20.6112432036503,2.60563598864226,10.126579934476,2.63079913935236,30.5444866835379,3.68199594569197,2.26304479546337,19.8805371809304,1.0075209822764,2.7129694769678,1.15956511897978,2.18196896472668,0.286804595389004,0,0,0.580969714347592,0.310983165046111,1.00928340350251,0,0,9.64861407289328,0,13.0023019848954,7.94067429836544,0,0,0,0,0,0,0,0,0,0,2.80483547606892,0.8231480226628,2.94017422771084,0,0,0,0,0.245976877086227,0.343135620597051,1.42675371031213,1.1240175325762,0,0,0.325808305310325,0,0,0,1.76113041353732,1.01056513432752,0.462985512576611,1.33177906564219,0,0,0,0,0,0,2.35174979478403,0,5.73174545298229,2.3250715081117,0.383382679165211,0,0,0,0,0,0.063497894292169,0,0,0,1.02827492703324,0,0,0.224262168690721,0.87192013766656,1.54010400223995,2.45616259939778,14.3062578340753,6.762422020448,2.12750493267896,0,2.05765899409714,8.5109479213967,2.93064396917709,1.85871391755592,1.62786481617433,4.11620168390384,2.93162565864362,2.48774364119782,1.58390374586686,2.41151501647669,0,0,0,0,0,3.83399768786532,2.29723871668228,0,3.18518874668674,5.54786070886035,1.79060963239896,0.112085143993527,0,0,0,0,0,0,0.335032530668698,0,0,0,0,2.20844685094452,13.5046040686113,8.13795071099207,17.4695523685878,15.5233220253531,6.93890626149313,4.91993942969395,0.300946099727719,0,3.10419213877515,1.99267679560631,1.47495334833363,1.21637060255316,0.587403472388222,4.80400793335198,0,0,0,0.606255142892519,0,5.44302527993425,10.1724201205699,18.4154367945675,12.9103643439214,5.76626171650654,4.60536524160033,11.5814823223397,11.8734453155993,5.5515489768956,11.3639504200401,4.5169935807595,1.55776328755086,10.1103029260165,0.604297247958111,3.60911646545913,0,0.68888668898764,2.36718518408732,2.75361271414791,0,0.462092022626489,0,0,0.422206515571503,1.13733384070897,0.170093705276516,0.215915916102139,4.62681758070868,0.541892875087706,1.50506932156456,0,0.831076008928724,0.895499018888713,0,0,0,0.328014645699706,0,0.412164046590889,0,0.247528499761764,0,0,6.42735719376638,3.48014585851639,6.47004191881506,4.60511024178389,3.30807773962873,7.62683738564743,8.99103502268217,2.64202544989913,3.73934549716297,2.47927373041467,2.30628080838127,0.382838137483752,0.910420027699949,2.32422774648643,24.8701753996206,0,1.23213432070436,0.532306030317022,0.869932992075073,1.48259375283136,0.143124886741991,1.116475108079,3.48017367190598,1.71567174531442,0.255897791311334,0.855877976067841,0.95460974377781,0.78494864019923,1.43897966066652,2.74537029736055,2.35624804691373,0,0,0.842516912477962,0.975267478179181,3.41198885483798,4.22600587027022,0.9554993798559,1.83827061539827,7.910568163417,0.551365343546124,5.30751180192976,0,1.15755106853338,4.59126326432643,1.01455188481352,0.30982349809975,1.12678241012897,1.72093622644862,3.14396931241988,0.7133421029625,0,4.85547561184627,11.8546161465565,0.379473173765715,0,0,0,0,0.376575203107117,0,0,0,1.1486170010348,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42068073403207,5.01363417949149,1.48482340416319,2.15012491469462,0,0,11.798722732428,0,0,2.19172787076177,0,0,0,0,11.8195043311487,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0.874813840149763,0,0,0,0,0,0,0,0,0,0,1.36730467016401,0,0,0,22.9680835006982,3.66390373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|phase1_expression=7.08545679155171,4.92431204949261,4.79244973926302,10.007329835313,3.5756887554183,11.3404008133048,0,0.631719873426831,0.261185628199839,0.245733936501509,1.39560233594486,1.74753097704138,4.48403862988371,1.11389717664042,3.31397375727916,3.36162573225888,3.61616716814386,2.92124036154949,2.92759679274304,0.123121058076788,1.02000345622126,1.56727360739044,0,0.136874425072884,1.38096903554283,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209658645508376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34362744548263,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,12.0726154746655,4.73091478821062,4.69870898099936,2.00535164254356,2.75208386025565,0,52.5565659926847,0.0945348171640679,0.665188192387692,1.22968699970376,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0.347140501607594,0,0.419499436209906,2.20094433552054,0,0.258416759169329,0.71153252537342,1.00416183829401,0,0,0.24406205754817,0,8.91156142669936,0.267899184852239,0,0.112611480483322,0,0,0.732806975721629,0,0,0.436094052142534,24.3516256330706,5.19185097824777,17.7428302289713,28.9704986956302,2.4826786753885,2.80338800071154,2.1349799145941,8.38669664618344,2.48968828319813,5.52313755485721,5.06731899651722,1.96764655938411,6.33793516927999,0.234321431833797,11.8620829195522,0.570471821544449,11.8064457635923,1.996386476944,2.5899671098901,1.54495887372473,1.63323337003915,2.7023549808589,0.826606249406124,0,3.4617370098998,0.910161361938026,2.87447256726495,1.5150250255866,0.875829639103749,0,0.438977620880838,3.37136575378922,2.10333282469236,2.38207584636044,18.8359117473305,4.69826255400848,5.72216133130817,19.2058301494017,2.88547081867629,20.6112432036503,2.60563598864226,10.126579934476,2.63079913935236,30.5444866835379,3.68199594569197,2.26304479546337,19.8805371809304,1.0075209822764,2.7129694769678,1.15956511897978,2.18196896472668,0.286804595389004,0,0,0.580969714347592,0.310983165046111,1.00928340350251,0,0,9.64861407289328,0,13.0023019848954,7.94067429836544,0,0,0,0,0,0,0,0,0,0,2.80483547606892,0.8231480226628,2.94017422771084,0,0,0,0,0.245976877086227,0.343135620597051,1.42675371031213,1.1240175325762,0,0,0.325808305310325,0,0,0,1.76113041353732,1.01056513432752,0.462985512576611,1.33177906564219,0,0,0,0,0,0,2.35174979478403,0,5.73174545298229,2.3250715081117,0.383382679165211,0,0,0,0,0,0.063497894292169,0,0,0,1.02827492703324,0,0,0.224262168690721,0.87192013766656,1.54010400223995,2.45616259939778,14.3062578340753,6.762422020448,2.12750493267896,0,2.05765899409714,8.5109479213967,2.93064396917709,1.85871391755592,1.62786481617433,4.11620168390384,2.93162565864362,2.48774364119782,1.58390374586686,2.41151501647669,0,0,0,0,0,3.83399768786532,2.29723871668228,0,3.18518874668674,5.54786070886035,1.79060963239896,0.112085143993527,0,0,0,0,0,0,0.335032530668698,0,0,0,0,2.20844685094452,13.5046040686113,8.13795071099207,17.4695523685878,15.5233220253531,6.93890626149313,4.91993942969395,0.300946099727719,0,3.10419213877515,1.99267679560631,1.47495334833363,1.21637060255316,0.587403472388222,4.80400793335198,0,0,0,0.606255142892519,0,5.44302527993425,10.1724201205699,18.4154367945675,12.9103643439214,5.76626171650654,4.60536524160033,11.5814823223397,11.8734453155993,5.5515489768956,11.3639504200401,4.5169935807595,1.55776328755086,10.1103029260165,0.604297247958111,3.60911646545913,0,0.68888668898764,2.36718518408732,2.75361271414791,0,0.462092022626489,0,0,0.422206515571503,1.13733384070897,0.170093705276516,0.215915916102139,4.62681758070868,0.541892875087706,1.50506932156456,0,0.831076008928724,0.895499018888713,0,0,0,0.328014645699706,0,0.412164046590889,0,0.247528499761764,0,0,6.42735719376638,3.48014585851639,6.47004191881506,4.60511024178389,3.30807773962873,7.62683738564743,8.99103502268217,2.64202544989913,3.73934549716297,2.47927373041467,2.30628080838127,0.382838137483752,0.910420027699949,2.32422774648643,24.8701753996206,0,1.23213432070436,0.532306030317022,0.869932992075073,1.48259375283136,0.143124886741991,1.116475108079,3.48017367190598,1.71567174531442,0.255897791311334,0.855877976067841,0.95460974377781,0.78494864019923,1.43897966066652,2.74537029736055,2.35624804691373,0,0,0.842516912477962,0.975267478179181,3.41198885483798,4.22600587027022,0.9554993798559,1.83827061539827,7.910568163417,0.551365343546124,5.30751180192976,0,1.15755106853338,4.59126326432643,1.01455188481352,0.30982349809975,1.12678241012897,1.72093622644862,3.14396931241988,0.7133421029625,0,4.85547561184627,11.8546161465565,0.379473173765715,0,0,0,0,0.376575203107117,0,0,0,1.1486170010348,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42068073403207,5.01363417949149,1.48482340416319,2.15012491469462,0,0,11.798722732428,0,0,2.19172787076177,0,0,0,0,11.8195043311487,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0.874813840149763,0,0,0,0,0,0,0,0,0,0,1.36730467016401,0,0,0,22.9680835006982,3.66390373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| ||
|short_description=p@chr2:216284024..216284054,+ | |||
}} | }} |
Latest revision as of 06:13, 29 July 2015
Short description: | p@chr2:216284024..216284054, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:216284024..216284054, + |
Coexpression cluster: | C79_chorionic_Chondrocyte_Cardiac_Smooth_Fibroblast_Preadipocyte_Mesenchymal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.85e-27 | 76 |
multi fate stem cell | 9.40e-21 | 427 |
somatic stem cell | 1.01e-20 | 433 |
stem cell | 7.12e-20 | 441 |
skin fibroblast | 6.10e-13 | 23 |
muscle precursor cell | 2.89e-12 | 58 |
myoblast | 2.89e-12 | 58 |
multi-potent skeletal muscle stem cell | 2.89e-12 | 58 |
connective tissue cell | 3.04e-12 | 361 |
preadipocyte | 5.75e-12 | 12 |
muscle cell | 8.53e-11 | 55 |
mesenchymal cell | 2.09e-10 | 354 |
motile cell | 2.65e-09 | 386 |
electrically responsive cell | 9.93e-09 | 61 |
electrically active cell | 9.93e-09 | 61 |
extraembryonic cell | 1.24e-08 | 19 |
mesenchymal stem cell of adipose | 3.22e-08 | 8 |
Ontology term | p-value | n |
---|---|---|
epithelial vesicle | 3.70e-13 | 78 |
dense mesenchyme tissue | 5.60e-13 | 73 |
somite | 9.32e-13 | 71 |
presomitic mesoderm | 9.32e-13 | 71 |
presumptive segmental plate | 9.32e-13 | 71 |
dermomyotome | 9.32e-13 | 71 |
trunk paraxial mesoderm | 9.32e-13 | 71 |
connective tissue | 1.58e-12 | 371 |
multilaminar epithelium | 1.69e-12 | 83 |
paraxial mesoderm | 2.16e-12 | 72 |
presumptive paraxial mesoderm | 2.16e-12 | 72 |
skeletal muscle tissue | 9.91e-11 | 62 |
striated muscle tissue | 9.91e-11 | 62 |
myotome | 9.91e-11 | 62 |
muscle tissue | 4.79e-10 | 64 |
musculature | 4.79e-10 | 64 |
musculature of body | 4.79e-10 | 64 |
trunk mesenchyme | 1.03e-09 | 122 |
integument | 1.34e-09 | 46 |
integumental system | 1.34e-09 | 46 |
skin of body | 1.49e-09 | 41 |
mesoderm | 4.43e-09 | 315 |
mesoderm-derived structure | 4.43e-09 | 315 |
presumptive mesoderm | 4.43e-09 | 315 |
mesenchyme | 6.39e-09 | 160 |
entire embryonic mesenchyme | 6.39e-09 | 160 |
extraembryonic structure | 1.16e-07 | 24 |
organ component layer | 1.94e-07 | 66 |
surface structure | 6.94e-07 | 99 |
unilaminar epithelium | 8.38e-07 | 148 |
splanchnic layer of lateral plate mesoderm | 9.86e-07 | 83 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 3.71e-07 | 14 |