FFCP PHASE1:Hg19::chr2:39117073..39117091,+: Difference between revisions
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|id=chr2:39117073..39117091,+
|short_description=p6@ARHGEF33
|description=CAGE_peak_6_at_ARHGEF33_5end
|association_with_transcript=52bp_to_ENST00000409978_5end
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=100271715 | |EntrezGene=100271715 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=37252 | |HGNC=37252 | ||
|TSSclassifier=strong | |||
|UniProt=A8MVX0 | |UniProt=A8MVX0 | ||
|association_with_transcript=52bp_to_ENST00000409978_5end | |||
|cluster_id=chr2:39117073..39117091,+ | |||
|coexpression_cluster_id=C11 | |||
|description=CAGE_peak_6_at_ARHGEF33_5end | |||
|id=chr2:39117073..39117091,+ | |||
|ontology_enrichment_celltype=CL:0002573!9.64e-07!2 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;3.27e-147;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004733!2.58e-49!12;UBERON:0002028!2.58e-49!12;UBERON:0007277!2.58e-49!12;UBERON:0004732!1.57e-45!13;UBERON:0003076!1.81e-39!15;UBERON:0003057!1.81e-39!15;UBERON:0001897!7.10e-34!2;UBERON:0002680!5.89e-30!9;UBERON:0001895!5.89e-30!9;UBERON:0010092!5.89e-30!9;UBERON:0002037!6.62e-26!6;UBERON:0006215!6.62e-26!6;UBERON:0001896!8.99e-23!3;UBERON:0005290!8.99e-23!3;UBERON:0010096!8.99e-23!3;UBERON:0001049!2.07e-22!57;UBERON:0005068!2.07e-22!57;UBERON:0006241!2.07e-22!57;UBERON:0007135!2.07e-22!57;UBERON:0002616!1.21e-21!59;UBERON:0000073!8.71e-20!94;UBERON:0001016!8.71e-20!94;UBERON:0002298!5.41e-19!8;UBERON:0001017!6.13e-19!82;UBERON:0003075!2.92e-18!86;UBERON:0007284!2.92e-18!86;UBERON:0000955!3.37e-18!69;UBERON:0006238!3.37e-18!69;UBERON:0005743!4.80e-18!86;UBERON:0002346!2.00e-17!90;UBERON:0007023!1.25e-13!115;UBERON:0004121!8.77e-11!169;UBERON:0000924!1.62e-10!173;UBERON:0006601!1.62e-10!173;UBERON:0001894!2.04e-10!7;UBERON:0006222!2.04e-10!7;UBERON:0000033!4.91e-10!123;UBERON:0002360!1.03e-09!2;UBERON:0000094!1.03e-09!2;UBERON:0007645!1.03e-09!2;UBERON:0000153!1.53e-09!129;UBERON:0007811!1.53e-09!129;UBERON:0002771!8.62e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0002037;2.58e-74;6!UBERON:0002680;5.60e-50;9!UBERON:0001895;5.60e-50;9!UBERON:0004733;8.61e-38;12!UBERON:0002028;8.61e-38;12!UBERON:0004732;5.63e-35;13!UBERON:0002360;9.18e-26;2!UBERON:0000094;9.18e-26;2!UBERON:0010743;9.18e-26;2!UBERON:0001016;8.52e-09;83!UBERON:0001017;2.80e-08;75!UBERON:0000073;7.85e-07;53!UBERON:0002616;7.85e-07;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,2.58e-74,6;UBERON:0006215,2.58e-74,6;UBERON:0002680,5.60e-50,9;UBERON:0001895,5.60e-50,9;UBERON:0010092,5.60e-50,9;UBERON:0004733,8.61e-38,12;UBERON:0002028,8.61e-38,12;UBERON:0007277,8.61e-38,12;UBERON:0004732,5.63e-35,13;UBERON:0003076,1.81e-30,15;UBERON:0003057,1.81e-30,15;UBERON:0002360,9.18e-26,2;UBERON:0000094,9.18e-26,2;UBERON:0010743,9.18e-26,2;UBERON:0001017,2.17e-10,81;UBERON:0001016,1.88e-09,89;UBERON:0000073,3.61e-09,53;UBERON:0002616,3.61e-09,53;UBERON:0001049,9.89e-09,56;UBERON:0005068,9.89e-09,56;UBERON:0006241,9.89e-09,56;UBERON:0007135,9.89e-09,56;UBERON:0007023,8.86e-08,114;UBERON:0000955,2.91e-07,68;UBERON:0006238,2.91e-07,68 | |||
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|short_description=p6@ARHGEF33 | |||
}} | }} |
Latest revision as of 04:26, 17 September 2015
Short description: | p6@ARHGEF33 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_ARHGEF33_5end |
Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
Association with transcript: | 52bp_to_ENST00000409978_5end |
EntrezGene: | ARHGEF33 |
HGNC: | 37252 |
UniProt: | A8MVX0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cerebellum | 2.58e-74 | 6 |
rhombic lip | 2.58e-74 | 6 |
regional part of metencephalon | 5.60e-50 | 9 |
metencephalon | 5.60e-50 | 9 |
future metencephalon | 5.60e-50 | 9 |
segmental subdivision of hindbrain | 8.61e-38 | 12 |
hindbrain | 8.61e-38 | 12 |
presumptive hindbrain | 8.61e-38 | 12 |
segmental subdivision of nervous system | 5.63e-35 | 13 |
posterior neural tube | 1.81e-30 | 15 |
chordal neural plate | 1.81e-30 | 15 |
meninx | 9.18e-26 | 2 |
membrane organ | 9.18e-26 | 2 |
meningeal cluster | 9.18e-26 | 2 |
central nervous system | 2.17e-10 | 81 |
nervous system | 1.88e-09 | 89 |
regional part of nervous system | 3.61e-09 | 53 |
regional part of brain | 3.61e-09 | 53 |
neural tube | 9.89e-09 | 56 |
neural rod | 9.89e-09 | 56 |
future spinal cord | 9.89e-09 | 56 |
neural keel | 9.89e-09 | 56 |
adult organism | 8.86e-08 | 114 |
brain | 2.91e-07 | 68 |
future brain | 2.91e-07 | 68 |