FFCP PHASE1:Hg19::chr2:74780176..74780259,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr2:74780176..74780259,-
|short_description=p2@LOXL3
|description=CAGE_peak_2_at_LOXL3_5end
|association_with_transcript=0bp_to_ENST00000409549,uc010ffm.1_5end...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=84695 | |EntrezGene=84695 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13869 | |HGNC=13869 | ||
|TSSclassifier=strong | |||
|UniProt=E7END4 | |UniProt=E7END4 | ||
|association_with_transcript=0bp_to_ENST00000409549,uc010ffm.1_5end | |||
|cluster_id=chr2:74780176..74780259,- | |||
|coexpression_cluster_id=C4245 | |||
|description=CAGE_peak_2_at_LOXL3_5end | |||
|id=chr2:74780176..74780259,- | |||
|ontology_enrichment_celltype=CL:0000055!9.09e-27!180;CL:0000057!7.38e-19!75;CL:0000048!6.80e-12!430;CL:0000723!6.40e-11!436;CL:0000034!9.25e-11!444;CL:0002334!2.91e-09!12;CL:0000680!5.31e-09!57;CL:0000056!5.31e-09!57;CL:0000355!5.31e-09!57;CL:0000359!2.52e-08!32;CL:0000187!5.03e-08!54;CL:0000393!9.19e-08!60;CL:0000211!9.19e-08!60;CL:0000183!1.19e-07!59;CL:0002620!4.27e-07!23;CL:0000192!5.17e-07!42;CL:0000514!5.17e-07!42;CL:0002320!6.20e-07!365 | |||
|ontology_enrichment_celltype_v019=CL:0002334;4.17e-14;12!CL:0000138;1.21e-09;6!CL:0000359;6.01e-09;32!CL:0000057;1.79e-08;73!CL:0000153;1.36e-07;9!CL:0000447;1.36e-07;9!CL:0002494;2.87e-07;16!CL:0002595;4.17e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,3.00e-22,76;CL:0000048,3.79e-18,427;CL:0000723,2.24e-17,433;CL:0000034,7.35e-17,441;CL:0002334,4.94e-14,12;CL:0002320,6.85e-14,361;CL:0000134,2.43e-11,354;CL:0000219,4.13e-10,386;CL:0000058,1.23e-09,6;CL:0000138,1.23e-09,6;CL:0000359,3.07e-09,32;CL:0000153,1.18e-07,9;CL:0000447,1.18e-07,9;CL:0000680,1.87e-07,58;CL:0000056,1.87e-07,58;CL:0000355,1.87e-07,58;CL:0002494,2.45e-07,16;CL:0002595,4.75e-07,5;CL:0000192,6.82e-07,43;CL:0000514,6.82e-07,43 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!3.13e-09!83;UBERON:0002329!3.13e-09!83;UBERON:0003077!3.13e-09!83;UBERON:0003059!3.13e-09!83;UBERON:0007282!3.13e-09!83;UBERON:0009618!3.13e-09!83;UBERON:0007285!3.13e-09!83;UBERON:0001134!1.62e-08!61;UBERON:0002036!1.62e-08!61;UBERON:0003082!1.62e-08!61;UBERON:0002384!3.23e-08!375;UBERON:0002385!8.39e-08!63;UBERON:0001015!8.39e-08!63;UBERON:0000383!8.39e-08!63;UBERON:0004290!1.58e-07!70 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;1.00e-08;33!UBERON:0004571;1.00e-08;33!UBERON:0003688;2.11e-07;6!UBERON:0002358;2.11e-07;6!UBERON:0003684;2.11e-07;6!UBERON:0001178;2.11e-07;6!UBERON:0002331;2.70e-07;10!UBERON:0001637;3.45e-07;42!UBERON:0003509;3.45e-07;42!UBERON:0004572;3.45e-07;42!UBERON:0003834;4.17e-07;5!UBERON:0001533;4.17e-07;5!UBERON:0002384;4.56e-07;198 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,3.44e-15,371;UBERON:0004573,3.85e-10,33;UBERON:0004571,3.85e-10,33;UBERON:0001637,4.14e-10,42;UBERON:0003509,4.14e-10,42;UBERON:0004572,4.14e-10,42;UBERON:0004872,1.93e-08,83;UBERON:0003688,2.49e-07,6;UBERON:0002358,2.49e-07,6;UBERON:0003684,2.49e-07,6;UBERON:0001178,2.49e-07,6;UBERON:0002331,3.36e-07,10;UBERON:0000358,3.36e-07,10;UBERON:0000307,3.36e-07,10;UBERON:0000091,3.36e-07,10;UBERON:0000087,3.36e-07,10;UBERON:0007010,3.36e-07,10;UBERON:0007806,3.36e-07,10;UBERON:0008780,3.36e-07,10;UBERON:0005728,3.36e-07,10;UBERON:0001134,4.18e-07,62;UBERON:0002036,4.18e-07,62;UBERON:0003082,4.18e-07,62;UBERON:0003834,4.75e-07,5;UBERON:0001533,4.75e-07,5;UBERON:0001013,8.80e-07,14 | |||
|phase1_expression=10.1739892391512,5.35251309727458,5.77913056793482,6.00439790118782,2.23480547213644,6.97870819280295,2.53299878168311,2.52687949370732,0.261185628199839,0,0,0,0,1.73272894144065,1.32558950291166,0,0,0,0,0.738726348460727,2.24400760368678,0.313454721478088,0,0,0.125542639594803,8.25264782077874,5.82914185094615,6.84783797429009,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0,0.223915474239924,0,0,0.145398238779565,0,0.242584061187816,0,0,0,0,0,0,0.344745680736619,0,0,0,0,0,0,0,0,0,0,0.426224750532694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,2.43806866313962,0,2.68511379871414,47.7099681147627,22.0588680679791,21.1475917682803,28.6302940938396,45.2570429381451,0.0945348171640679,0,0.087834785693126,0.261958150995425,0,0,0,0.522389211897802,0.664789802594326,0,0,0,0,0,0.347140501607594,0,0,0,0,0,0.35576626268671,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,22.3637378262893,2.02608818663328,11.1223711883104,2.58152958673932,1.77334191099179,8.97084160227691,4.2699598291882,3.7000132262574,0,0.808264032418128,0.490385709340376,1.36221684880438,0,0,0,0,0.597794722207204,0.117434498643765,0.971237666208789,0.842704840213491,3.0623125688234,2.08818339430006,0.516628905878827,5.94001428641027,1.23633464639278,0.910161361938026,0,0.336672227908132,0.250237039743928,1.93944880838928,2.63386572528503,3.98434134538726,5.40857012063748,1.36118619792025,8.79009214875424,1.92201649936711,4.02670612203168,5.10154863343484,3.7098910525838,5.41045134095821,0.744467425326359,1.35021065793013,0.292311015483596,3.28163906517349,2.66944706062668,0.484938170456436,8.16522062788213,4.13083602733325,2.7129694769678,0,0,0,0,0,0.813357600086629,0.829288440122964,1.00928340350251,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0.8231480226628,0,0,0,0,0,0,0.343135620597051,0,0,0,0,0,1.03993478527958,0,0.34779121492523,1.40890433082986,0,0,0,0,0,0.246217006087397,2.80805118167085,0.148631162288728,0,0,0,0,0,0,0,0.088048434013226,0,0,0,0,0,0,0,0.102827492703324,0,0,0.672786506072164,1.30788020649984,0.80672114403045,1.16344544182,3.57656445851882,0,0,0,0.257207374262142,0,2.66422179016099,0.57191197463259,13.0229185293946,0,0.325736184293735,0.355391948742546,0.791951872933429,1.50719688529793,0,0.99972991182057,0,0,0,21.3266121387509,2.29723871668228,0,12.1616297600767,0.205476322550383,3.9393411912777,0.112085143993527,0,0,0,0,2.60279707715243,0.773288812777695,0.167516265334349,0,0,0,0,1.34960640891054,3.50119364741774,4.88277042659524,11.6463682457252,12.3116002270042,2.68094105557689,8.9027475394462,12.6397361885642,0,1.03473071292505,1.32845119707087,1.29058417979192,8.51459421787212,3.72022199179207,2.40200396667599,0,0,0,0,0,0,11.4129591596637,18.8758227144317,5.3325417942284,12.429497477803,5.11707249066703,4.82561763430822,11.8734453155993,6.9394362211195,4.26148140751505,5.17401082886998,6.23105315020345,4.18357362455853,0,0,0,0.803701137152247,2.1850940160806,0.524497659837696,0,0.0770153371044148,0,0,0,0,0,0.647747748306418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.82051789532479,0.48335359146061,0.154048617114644,0.15350367472613,1.24052915236078,0.322260734604821,0.145016693914229,0.170453254832202,1.60257664164127,0,0,0.127612712494584,0,6.507837690162,108.29544730974,4.1822236209636,1.54016790088044,10.1138145760234,5.21959795245044,1.29726953372744,8.73061809126147,0.744316738719335,0.949138274156178,0.38126038784765,0.511795582622668,0,0.95460974377781,5.49464048139461,0.179872457583315,0,0,12.7374963391189,0,6.7401352998237,0,11.2108205230391,8.45201174054043,1.22849920267187,0,2.26016233240486,6.06501877900737,5.30751180192976,10.5228212460903,0.578775534266688,0,1.62328301570163,0.30982349809975,1.97186921772569,0,0,0.7133421029625,1.41904425628239,2.9555068941673,0,0,0,0,0,0,0,0,0,0,0,0,0.764637207142375,0,0.476463550915578,1.23408681925858,0.648473311192717,0,0,0.213648142254946,0,0,0,0,0,0,11.3760241716705,1.7235483311913,12.9120885461569,3.89546328329467,0,0,0,2.50634477090067,0.677167111206413,0,2.01799707191048,0,0,0,0,0.166849141711909,0,0,0,0.540911356951966,0.99921590399346,0,0,0.293016358543788,0.242721043499027,0,0,0,0,0,0,0.562677665642051,0,12.360290567007,0,0,0.552567831062295,5.2905877049398,0,2.33861130376032,0.622079175323615,0,0,0,0.690503839458535,2.3948309234694,5.55684950723184,0.969332746095218,0.185536196323703,0,0,0,0,0.1137934482855,0,0,0,0,0.347249989866585,0,0.361789315876224,1.52581736317083,0.331737779793674,0,0,0,0,0,1.02547850262301,0,0,0,0,0.0915975934018623,0,0,0.31396051279005,0,0.225595660617181,0,0,0,0.476809736941136,0,0,0,0,0,0.0884575645033392,1.83309043480088,24.6112536804916,9.63798723782722,7.62280231389824,0.202203398942031,0,0,0,0,0,0.394584402849391,0,0.61214552326098,0.379119477770928,0,0.103688191397247,0,0,0,0,0,0.138674673013139,0,0,0,0.17472666824203,0,0,0,0,0.0969890164884194,156.654624877413,6.55344148263544,9.59293472527256,0,0.1899323878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| ||
|short_description=p2@LOXL3 | |||
}} | }} |
Latest revision as of 12:02, 18 September 2015
Short description: | p2@LOXL3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_LOXL3_5end |
Coexpression cluster: | C4245_Smooth_extraskeletal_Chondrocyte_rhabdomyosarcoma_Multipotent_Fibroblast_spindle |
Association with transcript: | 0bp_to_ENST00000409549, uc010ffm.1_5end |
EntrezGene: | LOXL3 |
HGNC: | 13869 |
UniProt: | E7END4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 3.00e-22 | 76 |
multi fate stem cell | 3.79e-18 | 427 |
somatic stem cell | 2.24e-17 | 433 |
stem cell | 7.35e-17 | 441 |
preadipocyte | 4.94e-14 | 12 |
connective tissue cell | 6.85e-14 | 361 |
mesenchymal cell | 2.43e-11 | 354 |
motile cell | 4.13e-10 | 386 |
chondroblast | 1.23e-09 | 6 |
chondrocyte | 1.23e-09 | 6 |
vascular associated smooth muscle cell | 3.07e-09 | 32 |
GAG secreting cell | 1.18e-07 | 9 |
carbohydrate secreting cell | 1.18e-07 | 9 |
muscle precursor cell | 1.87e-07 | 58 |
myoblast | 1.87e-07 | 58 |
multi-potent skeletal muscle stem cell | 1.87e-07 | 58 |
cardiocyte | 2.45e-07 | 16 |
smooth muscle cell of the subclavian artery | 4.75e-07 | 5 |
smooth muscle cell | 6.82e-07 | 43 |
smooth muscle myoblast | 6.82e-07 | 43 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 3.44e-15 | 371 |
systemic artery | 3.85e-10 | 33 |
systemic arterial system | 3.85e-10 | 33 |
artery | 4.14e-10 | 42 |
arterial blood vessel | 4.14e-10 | 42 |
arterial system | 4.14e-10 | 42 |
splanchnic layer of lateral plate mesoderm | 1.93e-08 | 83 |
omentum | 2.49e-07 | 6 |
peritoneum | 2.49e-07 | 6 |
abdominal cavity | 2.49e-07 | 6 |
visceral peritoneum | 2.49e-07 | 6 |
umbilical cord | 3.36e-07 | 10 |
blastocyst | 3.36e-07 | 10 |
blastula | 3.36e-07 | 10 |
bilaminar disc | 3.36e-07 | 10 |
inner cell mass | 3.36e-07 | 10 |
cleaving embryo | 3.36e-07 | 10 |
connecting stalk | 3.36e-07 | 10 |
inner cell mass derived epiblast | 3.36e-07 | 10 |
extraembryonic mesoderm | 3.36e-07 | 10 |
skeletal muscle tissue | 4.18e-07 | 62 |
striated muscle tissue | 4.18e-07 | 62 |
myotome | 4.18e-07 | 62 |
thoracic segment blood vessel | 4.75e-07 | 5 |
subclavian artery | 4.75e-07 | 5 |
adipose tissue | 8.80e-07 | 14 |