FFCP PHASE1:Hg19::chr3:135915146..135915194,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr3:135915146..135915194,-
|short_description=p1@MSL2
|description=CAGE_peak_1_at_MSL2_5end
|association_with_transcript=0bp_to_ENST00000473093_5end
|EntrezGe...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=55167 | |EntrezGene=55167 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25544 | |HGNC=25544 | ||
|TSSclassifier=strong | |||
|UniProt=C9IZG7 | |UniProt=C9IZG7 | ||
|association_with_transcript=0bp_to_ENST00000473093_5end | |||
|cluster_id=chr3:135915146..135915194,- | |||
|description=CAGE_peak_1_at_MSL2_5end | |||
|id=chr3:135915146..135915194,- | |||
|ontology_enrichment_celltype=CL:0000738!3.68e-13!140;CL:0000037!6.59e-12!172;CL:0000566!6.59e-12!172;CL:0000766!1.10e-10!76;CL:0002032!1.49e-10!165;CL:0000837!1.49e-10!165;CL:0002031!1.82e-10!124;CL:0002057!4.24e-10!42;CL:0000988!1.64e-09!182;CL:0000860!3.33e-09!45;CL:0000763!3.97e-09!112;CL:0000049!3.97e-09!112;CL:0000557!6.20e-09!71;CL:0000839!8.92e-09!70;CL:0002087!1.07e-08!119;CL:0002009!1.05e-07!65;CL:0002194!4.55e-07!63;CL:0000576!4.55e-07!63;CL:0000040!4.55e-07!63;CL:0000559!4.55e-07!63 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.60e-08;33!CL:0002057;2.60e-08;33!CL:0000576;4.46e-08;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,3.94e-14,136;CL:0000037,1.08e-12,168;CL:0000766,5.76e-12,72;CL:0002031,2.32e-11,120;CL:0002032,2.70e-11,161;CL:0000837,2.70e-11,161;CL:0000988,1.77e-10,177;CL:0000557,4.20e-10,67;CL:0000860,4.24e-10,42;CL:0002057,4.24e-10,42;CL:0000763,5.46e-10,108;CL:0000049,5.46e-10,108;CL:0000839,6.09e-10,66;CL:0002087,1.68e-09,115;CL:0002009,8.15e-09,61;CL:0000473,2.67e-08,48;CL:0000234,2.67e-08,48;CL:0002194,3.97e-08,59;CL:0000576,3.97e-08,59;CL:0000040,3.97e-08,59;CL:0000559,3.97e-08,59 | |||
|ontology_enrichment_development_v019=CL:0002057;5.41e-08;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.57e-24!115;UBERON:0002390!1.86e-09!102;UBERON:0003061!1.86e-09!102;UBERON:0002193!1.22e-08!112;UBERON:0001049!2.41e-08!57;UBERON:0005068!2.41e-08!57;UBERON:0006241!2.41e-08!57;UBERON:0007135!2.41e-08!57;UBERON:0003080!7.07e-08!42;UBERON:0002780!1.69e-07!41;UBERON:0001890!1.69e-07!41;UBERON:0006240!1.69e-07!41 | |||
|ontology_enrichment_uberon_v019=UBERON:0007023;3.97e-07;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,4.62e-24,114;UBERON:0002390,2.11e-10,98;UBERON:0003061,2.11e-10,98;UBERON:0002193,1.81e-09,108;UBERON:0001049,5.47e-08,56;UBERON:0005068,5.47e-08,56;UBERON:0006241,5.47e-08,56;UBERON:0007135,5.47e-08,56;UBERON:0000073,5.82e-08,53;UBERON:0002616,5.82e-08,53;UBERON:0002780,1.69e-07,41;UBERON:0001890,1.69e-07,41;UBERON:0003080,1.69e-07,41;UBERON:0006240,1.69e-07,41 | |||
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| ||
|short_description=p1@MSL2 | |||
}} | }} |
Latest revision as of 23:41, 24 September 2015
Short description: | p1@MSL2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MSL2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000473093_5end |
EntrezGene: | MSL2 |
HGNC: | 25544 |
UniProt: | C9IZG7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 3.94e-14 | 136 |
hematopoietic stem cell | 1.08e-12 | 168 |
myeloid leukocyte | 5.76e-12 | 72 |
hematopoietic lineage restricted progenitor cell | 2.32e-11 | 120 |
hematopoietic oligopotent progenitor cell | 2.70e-11 | 161 |
hematopoietic multipotent progenitor cell | 2.70e-11 | 161 |
hematopoietic cell | 1.77e-10 | 177 |
granulocyte monocyte progenitor cell | 4.20e-10 | 67 |
classical monocyte | 4.24e-10 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.24e-10 | 42 |
myeloid cell | 5.46e-10 | 108 |
common myeloid progenitor | 5.46e-10 | 108 |
myeloid lineage restricted progenitor cell | 6.09e-10 | 66 |
nongranular leukocyte | 1.68e-09 | 115 |
macrophage dendritic cell progenitor | 8.15e-09 | 61 |
defensive cell | 2.67e-08 | 48 |
phagocyte | 2.67e-08 | 48 |
monopoietic cell | 3.97e-08 | 59 |
monocyte | 3.97e-08 | 59 |
monoblast | 3.97e-08 | 59 |
promonocyte | 3.97e-08 | 59 |
Ontology term | p-value | n |
---|---|---|
adult organism | 4.62e-24 | 114 |
hematopoietic system | 2.11e-10 | 98 |
blood island | 2.11e-10 | 98 |
hemolymphoid system | 1.81e-09 | 108 |
neural tube | 5.47e-08 | 56 |
neural rod | 5.47e-08 | 56 |
future spinal cord | 5.47e-08 | 56 |
neural keel | 5.47e-08 | 56 |
regional part of nervous system | 5.82e-08 | 53 |
regional part of brain | 5.82e-08 | 53 |
regional part of forebrain | 1.69e-07 | 41 |
forebrain | 1.69e-07 | 41 |
anterior neural tube | 1.69e-07 | 41 |
future forebrain | 1.69e-07 | 41 |