FFCP PHASE1:Hg19::chr3:167813484..167813519,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr3:167813484..167813519,-
|short_description=p3@GOLIM4
|description=CAGE_peak_3_at_GOLIM4_5end
|association_with_transcript=-67bp_to_NM_014498,uc003ffe.2,uc01...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=27333 | |EntrezGene=27333 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15448 | |HGNC=15448 | ||
|TSSclassifier=strong | |||
|UniProt=O00461 | |UniProt=O00461 | ||
|association_with_transcript=-67bp_to_NM_014498,uc003ffe.2,uc011bpe.1,uc011bpf.1,uc011bpg.1_5end | |||
|cluster_id=chr3:167813484..167813519,- | |||
|description=CAGE_peak_3_at_GOLIM4_5end | |||
|id=chr3:167813484..167813519,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2531!2.26e-07!51;DOID:0060083!2.26e-07!51 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:2531,7.25e-09,51;DOID:0060083,7.25e-09,51 | |||
|ontology_enrichment_uberon=UBERON:0001017!1.68e-12!82;UBERON:0001049!7.16e-12!57;UBERON:0005068!7.16e-12!57;UBERON:0006241!7.16e-12!57;UBERON:0007135!7.16e-12!57;UBERON:0005743!1.28e-11!86;UBERON:0000073!1.73e-11!94;UBERON:0001016!1.73e-11!94;UBERON:0000955!1.01e-10!69;UBERON:0006238!1.01e-10!69;UBERON:0002780!1.59e-09!41;UBERON:0001890!1.59e-09!41;UBERON:0006240!1.59e-09!41;UBERON:0002020!6.22e-09!34;UBERON:0003528!6.22e-09!34;UBERON:0003080!8.99e-09!42;UBERON:0002616!9.09e-09!59;UBERON:0001893!1.04e-08!34;UBERON:0002791!1.88e-08!33;UBERON:0001869!9.74e-08!32;UBERON:0003075!9.87e-08!86;UBERON:0007284!9.87e-08!86;UBERON:0000479!1.05e-07!787;UBERON:0002346!1.69e-07!90;UBERON:0007023!1.74e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0003528;3.54e-08;34!UBERON:0002020;3.54e-08;34!UBERON:0000073;3.94e-08;53!UBERON:0002616;3.94e-08;53!UBERON:0001893;1.07e-07;34!UBERON:0002791;2.02e-07;32!UBERON:0001869;3.31e-07;32!UBERON:0002780;5.52e-07;41!UBERON:0001890;5.52e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,2.89e-14,56;UBERON:0005068,2.89e-14,56;UBERON:0006241,2.89e-14,56;UBERON:0007135,2.89e-14,56;UBERON:0001017,1.24e-13,81;UBERON:0001016,2.40e-13,89;UBERON:0000073,1.27e-12,53;UBERON:0002616,1.27e-12,53;UBERON:0000955,3.92e-12,68;UBERON:0006238,3.92e-12,68;UBERON:0002780,2.82e-10,41;UBERON:0001890,2.82e-10,41;UBERON:0003080,2.82e-10,41;UBERON:0006240,2.82e-10,41;UBERON:0003528,5.21e-10,34;UBERON:0002020,5.21e-10,34;UBERON:0001893,9.33e-10,34;UBERON:0003075,4.41e-09,82;UBERON:0007284,4.41e-09,82;UBERON:0002791,6.56e-09,32;UBERON:0001869,1.21e-08,32;UBERON:0002346,1.21e-08,86;UBERON:0010314,2.08e-07,132;UBERON:0007023,2.50e-07,114 | |||
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| ||
|short_description=p3@GOLIM4 | |||
}} | }} |
Latest revision as of 14:02, 16 September 2015
Short description: | p3@GOLIM4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_GOLIM4_5end |
Coexpression cluster: | NA |
Association with transcript: | -67bp_to_NM_014498, uc003ffe.2, uc011bpe.1, uc011bpf.1, uc011bpg.1_5end |
EntrezGene: | GOLIM4 |
HGNC: | 15448 |
UniProt: | O00461 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural tube | 2.89e-14 | 56 |
neural rod | 2.89e-14 | 56 |
future spinal cord | 2.89e-14 | 56 |
neural keel | 2.89e-14 | 56 |
central nervous system | 1.24e-13 | 81 |
nervous system | 2.40e-13 | 89 |
regional part of nervous system | 1.27e-12 | 53 |
regional part of brain | 1.27e-12 | 53 |
brain | 3.92e-12 | 68 |
future brain | 3.92e-12 | 68 |
regional part of forebrain | 2.82e-10 | 41 |
forebrain | 2.82e-10 | 41 |
anterior neural tube | 2.82e-10 | 41 |
future forebrain | 2.82e-10 | 41 |
brain grey matter | 5.21e-10 | 34 |
gray matter | 5.21e-10 | 34 |
telencephalon | 9.33e-10 | 34 |
neural plate | 4.41e-09 | 82 |
presumptive neural plate | 4.41e-09 | 82 |
regional part of telencephalon | 6.56e-09 | 32 |
cerebral hemisphere | 1.21e-08 | 32 |
neurectoderm | 1.21e-08 | 86 |
structure with developmental contribution from neural crest | 2.08e-07 | 132 |
adult organism | 2.50e-07 | 114 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 7.25e-09 | 51 |
immune system cancer | 7.25e-09 | 51 |