FFCP PHASE1:Hg19::chr3:176919572..176919593,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr3:176919572..176919593,-
|short_description=p@chr3:176919572..176919593,-
|description=CAGE_peak_at_chr3:176919572..176919593,-
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr3:176919572..176919593,- | |||
|description=CAGE_peak_at_chr3:176919572..176919593,- | |||
|id=chr3:176919572..176919593,- | |||
|ontology_enrichment_celltype=CL:0000542!3.37e-29!53;CL:0000051!3.37e-29!53;CL:0000838!3.77e-28!52;CL:0000738!6.84e-27!140;CL:0000988!1.83e-25!182;CL:0000037!3.21e-25!172;CL:0000566!3.21e-25!172;CL:0002087!1.42e-24!119;CL:0000084!1.78e-23!25;CL:0000827!1.78e-23!25;CL:0002032!1.75e-22!165;CL:0000837!1.75e-22!165;CL:0000791!7.59e-19!18;CL:0000789!7.59e-19!18;CL:0002420!7.59e-19!18;CL:0002419!7.59e-19!18;CL:0000790!7.59e-19!18;CL:0002031!1.26e-18!124;CL:0000625!1.04e-10!11;CL:0000624!1.48e-08!6;CL:0000080!4.18e-08!6;CL:0000094!1.00e-07!8;CL:0000081!6.48e-07!11 | |||
|ontology_enrichment_celltype_v019=CL:0000084;2.74e-30;25!CL:0000791;2.97e-25;18!CL:0000789;2.97e-25;18!CL:0002419;2.97e-25;18!CL:0000542;1.11e-16;53!CL:0000624;7.07e-13;6!CL:0000625;6.21e-12;11!CL:0000775;2.45e-10;3!CL:0000081;8.65e-10;11!CL:0000094;1.05e-09;8!CL:0000623;5.74e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,6.01e-34,53;CL:0000051,6.01e-34,53;CL:0000838,5.38e-32,52;CL:0000084,3.59e-30,25;CL:0000827,3.59e-30,25;CL:0000791,3.59e-25,18;CL:0000789,3.59e-25,18;CL:0002420,3.59e-25,18;CL:0002419,3.59e-25,18;CL:0000790,3.59e-25,18;CL:0000738,2.66e-16,136;CL:0000988,2.22e-14,177;CL:0002087,7.46e-14,115;CL:0000624,8.57e-13,6;CL:0000037,1.69e-12,168;CL:0000625,6.30e-12,11;CL:0002032,1.62e-11,161;CL:0000837,1.62e-11,161;CL:0000775,2.18e-10,3;CL:0002031,6.70e-10,120;CL:0000081,9.85e-10,11;CL:0000094,1.20e-09,8;CL:0000623,5.14e-09,3;CL:0000825,5.14e-09,3;CL:0000893,1.69e-07,2;CL:0002489,1.69e-07,2;CL:0000809,1.69e-07,2;CL:0000808,1.69e-07,2;CL:0000894,1.69e-07,2;CL:0000806,1.69e-07,2;CL:0000807,1.69e-07,2;CL:0000805,1.69e-07,2;CL:0002425,1.69e-07,2;CL:0000785,2.86e-07,2;CL:0000955,2.86e-07,2;CL:0000818,2.86e-07,2;CL:0000954,2.86e-07,2;CL:0000816,2.86e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000790;2.97e-25;18!CL:0000051;1.11e-16;53!CL:0002425;1.90e-07;2!CL:0000954;3.48e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!1.04e-12!15;UBERON:0000179!1.04e-12!15;UBERON:0000463!1.04e-12!15;UBERON:0002390!4.80e-09!102;UBERON:0003061!4.80e-09!102;UBERON:0002193!1.43e-08!112 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.27e-17;15!UBERON:0000179;1.27e-17;15!UBERON:0000463;1.27e-17;15!UBERON:0002390;7.04e-12;32!UBERON:0002193;3.13e-08;42!UBERON:0002370;3.17e-07;2!UBERON:0005058;3.17e-07;2!UBERON:0009113;3.17e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.36e-17,15;UBERON:0000179,1.36e-17,15;UBERON:0000463,1.36e-17,15;UBERON:0002370,4.24e-13,4;UBERON:0005058,4.24e-13,4;UBERON:0009113,4.24e-13,4;UBERON:0003295,4.24e-13,4;UBERON:0005562,4.24e-13,4;UBERON:0003351,1.01e-08,6;UBERON:0001042,1.18e-07,10;UBERON:0009145,1.18e-07,10;UBERON:0004177,1.82e-07,7;UBERON:0005057,1.82e-07,7;UBERON:0006562,6.41e-07,11 | |||
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|short_description=p@chr3:176919572..176919593,- | |||
}} | }} |
Latest revision as of 18:24, 29 July 2015
Short description: | p@chr3:176919572..176919593, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:176919572..176919593, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
blood | 1.36e-17 | 15 |
haemolymphatic fluid | 1.36e-17 | 15 |
organism substance | 1.36e-17 | 15 |
thymus | 4.24e-13 | 4 |
hemolymphoid system gland | 4.24e-13 | 4 |
thymic region | 4.24e-13 | 4 |
pharyngeal gland | 4.24e-13 | 4 |
thymus primordium | 4.24e-13 | 4 |
pharyngeal epithelium | 1.01e-08 | 6 |
chordate pharynx | 1.18e-07 | 10 |
pharyngeal region of foregut | 1.18e-07 | 10 |
hemopoietic organ | 1.82e-07 | 7 |
immune organ | 1.82e-07 | 7 |
pharynx | 6.41e-07 | 11 |