FFCP PHASE1:Hg19::chr3:58186767..58186823,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr3:58186767..58186823,-
|short_description=p@chr3:58186767..58186823,-
|description=CAGE_peak_at_chr3:58186767..58186823,-
|association_with_transcript=NA
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr3:58186767..58186823,- | |||
|coexpression_cluster_id=C44 | |||
|description=CAGE_peak_at_chr3:58186767..58186823,- | |||
|id=chr3:58186767..58186823,- | |||
|ontology_enrichment_celltype=CL:0000945!4.47e-22!24;CL:0000826!4.47e-22!24;CL:0000236!3.45e-12!14;CL:0000738!5.19e-11!140;CL:0002087!2.23e-10!119;CL:0000542!3.23e-09!53;CL:0000051!3.23e-09!53;CL:0000838!2.65e-08!52;CL:0000451!1.06e-07!10;CL:0000037!1.35e-07!172;CL:0000566!1.35e-07!172;CL:0000840!1.44e-07!5;CL:0001029!1.44e-07!5;CL:0002031!1.96e-07!124;CL:0000784!2.62e-07!3;CL:0000988!3.29e-07!182 | |||
|ontology_enrichment_celltype_v019=CL:0000945;6.25e-34;24!CL:0000784;8.67e-20;3!CL:0002188;1.17e-19;5!CL:1000746;4.24e-14;7!CL:1000612;4.24e-14;7!CL:0000236;2.26e-11;13!CL:0000542;1.98e-09;53!CL:0002618;4.50e-09;3!CL:0002681;2.80e-08;12!CL:0002584;2.80e-08;12!CL:0000946;9.70e-08;1!CL:0000786;9.70e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,5.15e-34,24;CL:0000826,5.15e-34,24;CL:0000784,8.42e-20,3;CL:0002188,1.65e-19,5;CL:0000542,8.14e-17,53;CL:0000051,8.14e-17,53;CL:0000236,4.37e-15,14;CL:0000838,1.82e-14,52;CL:1000746,5.39e-14,7;CL:1000612,5.39e-14,7;CL:0002618,4.32e-09,3;CL:0002681,3.21e-08,12;CL:0002584,3.21e-08,12;CL:0000738,3.65e-08,136;CL:0000946,9.71e-08,1;CL:0000786,9.71e-08,1;CL:0000980,9.71e-08,1;CL:0002087,1.60e-07,115;CL:0000115,1.89e-07,36 | |||
|ontology_enrichment_development_v019=UBERON:0004872;5.97e-22;7!CL:0000051;1.98e-09;53!UBERON:0003124;3.51e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2355;7.50e-08;1!DOID:12603;8.26e-08;1!DOID:630;2.01e-07;1!DOID:0050177;2.01e-07;1!DOID:0050427;2.01e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:2355,7.50e-08,1;DOID:12603,8.54e-08,1;DOID:630,2.07e-07,1;DOID:0050177,2.07e-07,1;DOID:0050427,2.07e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0002106!2.90e-07!3;UBERON:0004854!2.90e-07!3;UBERON:0009034!2.90e-07!3;UBERON:0002095!2.90e-07!3;UBERON:0004782!2.90e-07!3;UBERON:0003281!2.90e-07!3;UBERON:0009664!2.90e-07!3;UBERON:0002296!2.90e-07!3;UBERON:0005602!2.90e-07!3;UBERON:0001179!2.90e-07!3;UBERON:0006293!2.90e-07!3;UBERON:0007023!7.47e-07!115;UBERON:0004177!7.71e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0002106;1.22e-19;3!UBERON:0000074;4.24e-14;7!UBERON:0001229;4.24e-14;7!UBERON:0004177;5.37e-12;5!UBERON:0005057;5.37e-12;5!UBERON:0000353;4.59e-10;15!UBERON:0001225;2.80e-08;12!UBERON:0008987;2.80e-08;12!UBERON:0005795;3.51e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003887,2.73e-24,12;UBERON:0002106,1.15e-19,3;UBERON:0004854,1.15e-19,3;UBERON:0009034,1.15e-19,3;UBERON:0002095,1.15e-19,3;UBERON:0004782,1.15e-19,3;UBERON:0003281,1.15e-19,3;UBERON:0009664,1.15e-19,3;UBERON:0002296,1.15e-19,3;UBERON:0005602,1.15e-19,3;UBERON:0001179,1.15e-19,3;UBERON:0006293,1.15e-19,3;UBERON:0010532,5.39e-14,7;UBERON:0000074,5.39e-14,7;UBERON:0001229,5.39e-14,7;UBERON:0001230,5.39e-14,7;UBERON:0003220,5.39e-14,7;UBERON:0005749,5.39e-14,7;UBERON:0004199,5.39e-14,7;UBERON:0004209,5.39e-14,7;UBERON:0004198,5.39e-14,7;UBERON:0005103,2.88e-12,8;UBERON:0000083,2.88e-12,8;UBERON:0009201,2.88e-12,8;UBERON:0006553,2.88e-12,8;UBERON:0003074,2.88e-12,8;UBERON:0003060,2.88e-12,8;UBERON:0000080,6.40e-11,9;UBERON:0002120,6.40e-11,9;UBERON:0004875,6.40e-11,9;UBERON:0005721,6.40e-11,9;UBERON:0005754,6.40e-11,9;UBERON:0007297,6.40e-11,9;UBERON:0000353,5.26e-10,15;UBERON:0004876,5.87e-09,11;UBERON:0004177,1.04e-08,7;UBERON:0005057,1.04e-08,7;UBERON:0001225,3.21e-08,12;UBERON:0008987,3.21e-08,12;UBERON:0000058,7.54e-08,19;UBERON:0005172,9.08e-08,54;UBERON:0005173,9.08e-08,54;UBERON:0000945,1.13e-07,8;UBERON:0010039,1.13e-07,8;UBERON:0002417,7.54e-07,60;UBERON:0000916,7.54e-07,60 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68109492645493,1.64201178899891,1.49550484495991,0.393364276848904,0.383829398097213,0,0,0,0,0.0774672005803016,0.426507697462265,0.293600439334847,0,0,0,0,0,0,0,0.377875943688809,0.242584061187816,0,0,0,0,0,0.236482229888585,0,0,0,0,0.272906150057846,0,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0.368277635987565,0,0.845021145247767,0.212604299965044,0,0,0,0,0.285012743741249,0.19891667719909,0,1.75996244461323,1.63841583378639,0.889509253863555,0,0.400395987036012,4.02326707968138,3.30522436392431,0.954053754535364,1.1384259382189,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0.221533894583621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0.97364218096405,0.522389211897802,0.26591592103773,37.4430280159387,2.28797964312051,31.9453451143426,0,0,0,0,0,0,0,0.516833518338658,0,0.33472061276467,0,0,0.24406205754817,0,0,2.05389375053383,2.69435247151404,0.563057402416611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.548642728619,0,0,0,0,0,1.77236972004421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.215714200818617,0.74709290462411,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.96133688496276,1.19065593693561,1.0795795805107,4.62681758070868,0,0,0,0,0,0,0,0,0,0,0.721287081534056,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.359744915166629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.753150406214233,0,0,0,0,0,0.764637207142375,0,0,0,0,0.540031437238115,0.79312517629427,0,0,0,16.536482586189,0.144269212976445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.87742754950845,0,0,0,0,0,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0.583209226766509,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,2.4441205797345,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,18.458786390341,0,0,0,0,0,0.2249738915515,0,0,0,0.551639951094387,0.157363764404994,0,0,0,0,0,0,0,0,0,0,0,0,0,0.58620893471233,0,0,0,0,0,0.427149650270779,0.78602152549833,0.414239055347196,0.992332043623902,0,0,0,0,0.2506898940227,0,0.655745261419609,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.87524419753279,0,0,0,1.11542187833102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0.261906694481422,0,0,0.135075169236789,0,0,0,0.546974809018219,0,0,0,0,0,0,0.606965604236632,0,1.1531308121143,9.10348501690656,0,0,0.0657727735628491,0,0,0.078493092850514,0,0,0.913158720509496,0,0,0.357382720883282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0.485710993059139,0,0,0,0,0,0,0.0771741581079447,0.655678681511872,0,0,0,0,0,0.4226557275834,0,5.82700291475092,4.76988371004471,16.9899965072379,0,0,0,0.730336388246517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0.714193294391221,0.322944549180031,0.248298857183432,0,0.12729431655633,0,0,0,0.740872583160463,0.358611026963382,0.332660356546013,0,0,0,0,0,0,1.22068853494722,0,2.01273793591026,2.24397944612263 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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68109492645493,1.64201178899891,1.49550484495991,0.393364276848904,0.383829398097213,0,0,0,0,0.0774672005803016,0.426507697462265,0.293600439334847,0,0,0,0,0,0,0,0.377875943688809,0.242584061187816,0,0,0,0,0,0.236482229888585,0,0,0,0,0.272906150057846,0,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0.368277635987565,0,0.845021145247767,0.212604299965044,0,0,0,0,0.285012743741249,0.19891667719909,0,1.75996244461323,1.63841583378639,0.889509253863555,0,0.400395987036012,4.02326707968138,3.30522436392431,0.954053754535364,1.1384259382189,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0.221533894583621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0.97364218096405,0.522389211897802,0.26591592103773,37.4430280159387,2.28797964312051,31.9453451143426,0,0,0,0,0,0,0,0.516833518338658,0,0.33472061276467,0,0,0.24406205754817,0,0,2.05389375053383,2.69435247151404,0.563057402416611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.548642728619,0,0,0,0,0,1.77236972004421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.215714200818617,0.74709290462411,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.96133688496276,1.19065593693561,1.0795795805107,4.62681758070868,0,0,0,0,0,0,0,0,0,0,0.721287081534056,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.359744915166629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.753150406214233,0,0,0,0,0,0.764637207142375,0,0,0,0,0.540031437238115,0.79312517629427,0,0,0,16.536482586189,0.144269212976445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.87742754950845,0,0,0,0,0,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0.583209226766509,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,2.4441205797345,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,18.458786390341,0,0,0,0,0,0.2249738915515,0,0,0,0.551639951094387,0.157363764404994,0,0,0,0,0,0,0,0,0,0,0,0,0,0.58620893471233,0,0,0,0,0,0.427149650270779,0.78602152549833,0.414239055347196,0.992332043623902,0,0,0,0,0.2506898940227,0,0.655745261419609,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.87524419753279,0,0,0,1.11542187833102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0.261906694481422,0,0,0.135075169236789,0,0,0,0.546974809018219,0,0,0,0,0,0,0.606965604236632,0,1.1531308121143,9.10348501690656,0,0,0.0657727735628491,0,0,0.078493092850514,0,0,0.913158720509496,0,0,0.357382720883282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0.485710993059139,0,0,0,0,0,0,0.0771741581079447,0.655678681511872,0,0,0,0,0,0.4226557275834,0,5.82700291475092,4.76988371004471,16.9899965072379,0,0,0,0.730336388246517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0.714193294391221,0.322944549180031,0.248298857183432,0,0.12729431655633,0,0,0,0.740872583160463,0.358611026963382,0.332660356546013,0,0,0,0,0,0,1.22068853494722,0,2.01273793591026,2.24397944612263 | ||
|short_description=p@chr3:58186767..58186823,- | |||
}} | }} |
Latest revision as of 22:52, 29 July 2015
Short description: | p@chr3:58186767..58186823, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:58186767..58186823, - |
Coexpression cluster: | C44_Dendritic_CD19_CD133_granulocyte_acute_thymus_immature |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 5.15e-34 | 24 |
pro-B cell | 5.15e-34 | 24 |
plasmacytoid dendritic cell | 8.42e-20 | 3 |
glomerular endothelial cell | 1.65e-19 | 5 |
lymphocyte | 8.14e-17 | 53 |
common lymphoid progenitor | 8.14e-17 | 53 |
B cell | 4.37e-15 | 14 |
lymphoid lineage restricted progenitor cell | 1.82e-14 | 52 |
glomerular cell | 5.39e-14 | 7 |
kidney corpuscule cell | 5.39e-14 | 7 |
endothelial cell of umbilical vein | 4.32e-09 | 3 |
kidney cortical cell | 3.21e-08 | 12 |
renal cortical epithelial cell | 3.21e-08 | 12 |
leukocyte | 3.65e-08 | 136 |
antibody secreting cell | 9.71e-08 | 1 |
plasma cell | 9.71e-08 | 1 |
plasmablast | 9.71e-08 | 1 |
nongranular leukocyte | 1.60e-07 | 115 |
endothelial cell | 1.89e-07 | 36 |
Ontology term | p-value | n |
---|---|---|
anemia | 7.50e-08 | 1 |
acute leukemia | 8.54e-08 | 1 |
genetic disease | 2.07e-07 | 1 |
monogenic disease | 2.07e-07 | 1 |
xeroderma pigmentosum | 2.07e-07 | 1 |